Snakes, Active Contours, and Segmentation Introduction and Classical Active Contours Active Contours Without Edges

Size: px
Start display at page:

Download "Snakes, Active Contours, and Segmentation Introduction and Classical Active Contours Active Contours Without Edges"

Transcription

1 Level Sets & Snakes Snakes, Active Contours, and Segmentation Introduction and Classical Active Contours Active Contours Without Edges Scale Space and PDE methods in image analysis and processing - Arjan Kuijper 1/19

2 Introduction and Classical Active Contours The basic idea in active contour models (or snakes) is to evolve a curve, subject to constraints from a given image u 0, in order to detect objects in that image. Ideally, we begin with a curve around the object to be detected, and the curve then moves normal to itself and stops at the boundary of the object. Since its invention this technique has been used both often and successfully. The classical snakes model involves an edge detector, which depends on the gradient of the image u0, to stop the evolving curve at the boundary of the object. Scale Space and PDE methods in image analysis and processing - Arjan Kuijper 2/19

3 Introduction and Classical Active Contours Let u 0 (x, y) map the square 0 x, y 1 into R, where u 0 is the image and C(s) : [0, 1] Ø R 2 is the parametrized curve. The snake model is to minimize where a, b, and l are positive parameters. The first two terms control the smoothness of the contour, while the third attracts the contour toward the object in the image (the external energy). Observe that by minimizing the energy, we are trying to locate the curve at the points of maximum u 0, which act as an edge detector, while keeping the curve smooth. Scale Space and PDE methods in image analysis and processing - Arjan Kuijper 3/19

4 Introduction and Classical Active Contours An edge detector can be defined by a positive decreasing function g(z), depending on the gradient of the image u 0, such that A typical example is for p 1, where J is a Gaussian of variance s. We can also define a compact version for the energy via Scale Space and PDE methods in image analysis and processing - Arjan Kuijper 4/19

5 Introduction and Classical Active Contours Using the variational level set formulation of Zhao et al., we arrive at This is motion of the curve with normal velocity equal to its curvature times the edge detector plus convection in the direction that is the gradient of the edge detector. Thus, the image gradient determines the location of the snakes. Scale Space and PDE methods in image analysis and processing - Arjan Kuijper 5/19

6 Introduction and Classical Active Contours In a sequence of papers beginning with Chan and Vese, the authors propose a different active contour model without a stopping (i.e. edge) function, so a model that does not use the gradient of the image u0 for the stopping process. The stopping term is now based on the Mumford-Shah segmentation technique. The model these authors develop can detect contours both with and without gradients, for instance objects that are very smooth, or even have discontinuous boundaries. In addition, the model and its level set formulation are such that interior contours are automatically detected, and the initial curve can be anywhere in the image. Scale Space and PDE methods in image analysis and processing - Arjan Kuijper 6/19

7 Active Contours Without Edges Define the evolving curve G as the boundary of a region W. We call W the inside of G and the complement of W = W c the outside of G. The method is the minimization of an energy-based segmentation. Assume that u 0 is formed by two regions of approximately piecewise constant intensities of distinct values u 0i and u 00. Assume further that the object to be detected is represented by the region with value u 0i. Denote its boundary by G 0. Then we have u 0 u 0 i inside G0 and u 0 u 0 0 outside G0. Now consider the fitting term where G is any curve and C 1, C 2 are the averages of u 0 inside G and outside G. In this simple case it is obvious that 0, the boundary of the object, is the minimizer of the fitting term. Scale Space and PDE methods in image analysis and processing - Arjan Kuijper 7/19

8 Active Contours Without Edges Scale Space and PDE methods in image analysis and processing - Arjan Kuijper 8/19

9 Active Contours Without Edges In the following active contour model the fitting term plus some regularizing terms will be minimized. The regularizing terms will involve the length of the boundary G and the area of W. This is in the spirit of the Mumford-Shah functional. Thus, using the variational level set formulation, the energy can be written, with f the level set function associated with G, as (m, n, l 1, l 2 0) Scale Space and PDE methods in image analysis and processing - Arjan Kuijper 9/19

10 Active Contours Without Edges The classical Mumford-Shah functional is a more general segmentation defined by Here u is the cartoon image approximating u 0, u is smooth except for jumps on the set G of boundary curves, and G segments the image into piecewise smooth regions. The method differs in that only two subregions are allowed in which u is piecewise constant, so we may write Scale Space and PDE methods in image analysis and processing - Arjan Kuijper 10/19

11 Active Contours Without Edges We have This expresses the fact that the best constant value for the segment u is just the average of u 0 over the subregion. Scale Space and PDE methods in image analysis and processing - Arjan Kuijper 11/19

12 Active Contours Without Edges In order to compute the Euler-Lagrange equations we use the variational level set approach and arrive at The non-morphological approach is more effective; i.e., f is replaced by d e (f) in the term multiplying the brackets. Here for e > 0 and small, which gives a globally positive approximation to the delta function. Scale Space and PDE methods in image analysis and processing - Arjan Kuijper 12/19

13 Active Contours Without Edges Thus the model is Generally, the parameters are taken to be n = 0, l 1 = l 2 = 1, and μ > 0 is the scale parameter. Although only two regions can be constructed, they can, and generally will, be disconnected into numerous components in the finescale case, with each component having one of two constant values for u. One important remark concerning this model as opposed to other level set evolutions is its global nature. All level sets have the potential to be important. Thus reinitialization to the distance function is not a good idea here. Scale Space and PDE methods in image analysis and processing - Arjan Kuijper 13/19

14 Active Contours Without Edges Scale Space and PDE methods in image analysis and processing - Arjan Kuijper 14/19

15 Active Contours Without Edges Scale Space and PDE methods in image analysis and processing - Arjan Kuijper 15/19

16 Extensions Replacing u 0 by the curvature of its level sets Replacing u 0 by orientations to do texture segmentation. Vector valued images. Removing the piecewise constant assumption and allowing piecewisesmooth solutions to the variational problem, smooth inside each zero isocontour of f, with jumps across the edges. Getting several (many!) different regions corresponding to different level set functions. Based on the four color theorem we can partition an image using only four colors such that any two adjacent regions have different colors. Therefore, using two level set functions we can identify the four colors by the four possibilities f i > 0, f i < 0, i = 1, 2. This automatically gives a segmentation of the image. Scale Space and PDE methods in image analysis and processing - Arjan Kuijper 16/19

17 Extensions: two channels Scale Space and PDE methods in image analysis and processing - Arjan Kuijper 17/19

18 Extensions: 3 channels Scale Space and PDE methods in image analysis and processing - Arjan Kuijper 18/19

19 Extensions: 4 phases Scale Space and PDE methods in image analysis and processing - Arjan Kuijper 19/19

Automated Segmentation Using a Fast Implementation of the Chan-Vese Models

Automated Segmentation Using a Fast Implementation of the Chan-Vese Models Automated Segmentation Using a Fast Implementation of the Chan-Vese Models Huan Xu, and Xiao-Feng Wang,,3 Intelligent Computation Lab, Hefei Institute of Intelligent Machines, Chinese Academy of Science,

More information

Level Set Evolution without Reinitilization

Level Set Evolution without Reinitilization Level Set Evolution without Reinitilization Outline Parametric active contour (snake) models. Concepts of Level set method and geometric active contours. A level set formulation without reinitialization.

More information

Variational Methods II

Variational Methods II Mathematical Foundations of Computer Graphics and Vision Variational Methods II Luca Ballan Institute of Visual Computing Last Lecture If we have a topological vector space with an inner product and functionals

More information

Yunyun Yang, Chunming Li, Chiu-Yen Kao and Stanley Osher. Speaker: Chiu-Yen Kao (Math Department, The Ohio State University) BIRS, Banff, Canada

Yunyun Yang, Chunming Li, Chiu-Yen Kao and Stanley Osher. Speaker: Chiu-Yen Kao (Math Department, The Ohio State University) BIRS, Banff, Canada Yunyun Yang, Chunming Li, Chiu-Yen Kao and Stanley Osher Speaker: Chiu-Yen Kao (Math Department, The Ohio State University) BIRS, Banff, Canada Outline Review of Region-based Active Contour Models Mumford

More information

An Active Contour Model without Edges

An Active Contour Model without Edges An Active Contour Model without Edges Tony Chan and Luminita Vese Department of Mathematics, University of California, Los Angeles, 520 Portola Plaza, Los Angeles, CA 90095-1555 chan,lvese@math.ucla.edu

More information

weighted minimal surface model for surface reconstruction from scattered points, curves, and/or pieces of surfaces.

weighted minimal surface model for surface reconstruction from scattered points, curves, and/or pieces of surfaces. weighted minimal surface model for surface reconstruction from scattered points, curves, and/or pieces of surfaces. joint work with (S. Osher, R. Fedkiw and M. Kang) Desired properties for surface reconstruction:

More information

Geometrical Modeling of the Heart

Geometrical Modeling of the Heart Geometrical Modeling of the Heart Olivier Rousseau University of Ottawa The Project Goal: Creation of a precise geometrical model of the heart Applications: Numerical calculations Dynamic of the blood

More information

SCIENCE & TECHNOLOGY

SCIENCE & TECHNOLOGY Pertanika J. Sci. & Technol. 26 (1): 309-316 (2018) SCIENCE & TECHNOLOGY Journal homepage: http://www.pertanika.upm.edu.my/ Application of Active Contours Driven by Local Gaussian Distribution Fitting

More information

College of Engineering, Trivandrum.

College of Engineering, Trivandrum. Analysis of CT Liver Images Using Level Sets with Bayesian Analysis-A Hybrid Approach Sajith A.G 1, Dr. Hariharan.S 2 1 Research Scholar, 2 Professor, Department of Electrical&Electronics Engineering College

More information

Image Segmentation II Advanced Approaches

Image Segmentation II Advanced Approaches Image Segmentation II Advanced Approaches Jorge Jara W. 1,2 1 Department of Computer Science DCC, U. of Chile 2 SCIAN-Lab, BNI Outline 1. Segmentation I Digital image processing Segmentation basics 2.

More information

Active Geodesics: Region-based Active Contour Segmentation with a Global Edge-based Constraint

Active Geodesics: Region-based Active Contour Segmentation with a Global Edge-based Constraint Active Geodesics: Region-based Active Contour Segmentation with a Global Edge-based Constraint Vikram Appia Anthony Yezzi Georgia Institute of Technology, Atlanta, GA, USA. Abstract We present an active

More information

Submitted by Wesley Snyder, Ph.D. Department of Electrical and Computer Engineering. North Carolina State University. February 29 th, 2004.

Submitted by Wesley Snyder, Ph.D. Department of Electrical and Computer Engineering. North Carolina State University. February 29 th, 2004. Segmentation using Multispectral Adaptive Contours Final Report To U.S. Army Research Office On contract #DAAD-19-03-1-037 Submitted by Wesley Snyder, Ph.D. Department of Electrical and Computer Engineering

More information

Edge Detection and Active Contours

Edge Detection and Active Contours Edge Detection and Active Contours Elsa Angelini, Florence Tupin Department TSI, Telecom ParisTech Name.surname@telecom-paristech.fr 2011 Outline Introduction Edge Detection Active Contours Introduction

More information

Outline. Level Set Methods. For Inverse Obstacle Problems 4. Introduction. Introduction. Martin Burger

Outline. Level Set Methods. For Inverse Obstacle Problems 4. Introduction. Introduction. Martin Burger For Inverse Obstacle Problems Martin Burger Outline Introduction Optimal Geometries Inverse Obstacle Problems & Shape Optimization Sensitivity Analysis based on Gradient Flows Numerical Methods University

More information

A Survey of Image Segmentation Based On Multi Region Level Set Method

A Survey of Image Segmentation Based On Multi Region Level Set Method A Survey of Image Segmentation Based On Multi Region Level Set Method Suraj.R 1, Sudhakar.K 2 1 P.G Student, Computer Science and Engineering, Hindusthan College Of Engineering and Technology, Tamilnadu,

More information

Segmentation Using Active Contour Model and Level Set Method Applied to Medical Images

Segmentation Using Active Contour Model and Level Set Method Applied to Medical Images Segmentation Using Active Contour Model and Level Set Method Applied to Medical Images Dr. K.Bikshalu R.Srikanth Assistant Professor, Dept. of ECE, KUCE&T, KU, Warangal, Telangana, India kalagaddaashu@gmail.com

More information

Over Some Open 2D/3D Shape Features Extraction and Matching Problems

Over Some Open 2D/3D Shape Features Extraction and Matching Problems Over Some Open 2D/3D Shape Features Extraction and Matching Problems Dr. Nikolay Metodiev Sirakov Dept. of CS and Dept. of Math Texas A&M University Commerce Commerce, TX 75 429 E-mail: Nikolay_Sirakov@tamu-commerce.edu

More information

A LOCAL LIKELIHOOD ACTIVE CONTOUR MODEL FOR MEDICAL IMAGE SEGEMENTATION. A thesis presented to. the faculty of

A LOCAL LIKELIHOOD ACTIVE CONTOUR MODEL FOR MEDICAL IMAGE SEGEMENTATION. A thesis presented to. the faculty of A LOCAL LIKELIHOOD ACTIVE CONTOUR MODEL FOR MEDICAL IMAGE SEGEMENTATION A thesis presented to the faculty of the Russ College of Engineering and Technology of Ohio University In partial fulfillment of

More information

Global Minimization of the Active Contour Model with TV-Inpainting and Two-Phase Denoising

Global Minimization of the Active Contour Model with TV-Inpainting and Two-Phase Denoising Global Minimization of the Active Contour Model with TV-Inpainting and Two-Phase Denoising Shingyu Leung and Stanley Osher Department of Mathematics, UCLA, Los Angeles, CA 90095, USA {syleung, sjo}@math.ucla.edu

More information

Extract Object Boundaries in Noisy Images using Level Set. Literature Survey

Extract Object Boundaries in Noisy Images using Level Set. Literature Survey Extract Object Boundaries in Noisy Images using Level Set by: Quming Zhou Literature Survey Submitted to Professor Brian Evans EE381K Multidimensional Digital Signal Processing March 15, 003 Abstract Finding

More information

A Systematic Analysis System for CT Liver Image Classification and Image Segmentation by Local Entropy Method

A Systematic Analysis System for CT Liver Image Classification and Image Segmentation by Local Entropy Method A Systematic Analysis System for CT Liver Image Classification and Image Segmentation by Local Entropy Method A.Anuja Merlyn 1, A.Anuba Merlyn 2 1 PG Scholar, Department of Computer Science and Engineering,

More information

ISSN: X International Journal of Advanced Research in Electronics and Communication Engineering (IJARECE) Volume 6, Issue 8, August 2017

ISSN: X International Journal of Advanced Research in Electronics and Communication Engineering (IJARECE) Volume 6, Issue 8, August 2017 ENTROPY BASED CONSTRAINT METHOD FOR IMAGE SEGMENTATION USING ACTIVE CONTOUR MODEL M.Nirmala Department of ECE JNTUA college of engineering, Anantapuramu Andhra Pradesh,India Abstract: Over the past existing

More information

Fraunhofer Institute for Computer Graphics Research Interactive Graphics Systems Group, TU Darmstadt Fraunhoferstrasse 5, Darmstadt, Germany

Fraunhofer Institute for Computer Graphics Research Interactive Graphics Systems Group, TU Darmstadt Fraunhoferstrasse 5, Darmstadt, Germany 20-00-469 Scale Space and PDE methods in image analysis and processing Arjan Kuijper Fraunhofer Institute for Computer Graphics Research Interactive Graphics Systems Group, TU Darmstadt Fraunhoferstrasse

More information

The Level Set Method THE LEVEL SET METHOD THE LEVEL SET METHOD 203

The Level Set Method THE LEVEL SET METHOD THE LEVEL SET METHOD 203 The Level Set Method Fluid flow with moving interfaces or boundaries occur in a number of different applications, such as fluid-structure interaction, multiphase flows, and flexible membranes moving in

More information

Contents. I The Basic Framework for Stationary Problems 1

Contents. I The Basic Framework for Stationary Problems 1 page v Preface xiii I The Basic Framework for Stationary Problems 1 1 Some model PDEs 3 1.1 Laplace s equation; elliptic BVPs... 3 1.1.1 Physical experiments modeled by Laplace s equation... 5 1.2 Other

More information

Implicit Active Contours Driven by Local Binary Fitting Energy

Implicit Active Contours Driven by Local Binary Fitting Energy Implicit Active Contours Driven by Local Binary Fitting Energy Chunming Li 1, Chiu-Yen Kao 2, John C. Gore 1, and Zhaohua Ding 1 1 Institute of Imaging Science 2 Department of Mathematics Vanderbilt University

More information

Method of Background Subtraction for Medical Image Segmentation

Method of Background Subtraction for Medical Image Segmentation Method of Background Subtraction for Medical Image Segmentation Seongjai Kim Department of Mathematics and Statistics, Mississippi State University Mississippi State, MS 39762, USA and Hyeona Lim Department

More information

MetaMorphs: Deformable Shape and Texture Models

MetaMorphs: Deformable Shape and Texture Models MetaMorphs: Deformable Shape and Texture Models Xiaolei Huang, Dimitris Metaxas, Ting Chen Division of Computer and Information Sciences Rutgers University New Brunswick, NJ 8854, USA {xiaolei, dnm}@cs.rutgers.edu,

More information

Hierarchical Segmentation of Thin Structures in Volumetric Medical Images

Hierarchical Segmentation of Thin Structures in Volumetric Medical Images Hierarchical Segmentation of Thin Structures in Volumetric Medical Images Michal Holtzman-Gazit 1, Dorith Goldsher 2, and Ron Kimmel 3 1 Electrical Engineering Department 2 Faculty of Medicine - Rambam

More information

MULTIPHASE LEVEL SET EVOLUTION WITH APPLICATIONS TO AUTOMATIC GENERATIONAL TRACKING OF CELL DIVISION OF ESCHERICHIA COLI. A Thesis.

MULTIPHASE LEVEL SET EVOLUTION WITH APPLICATIONS TO AUTOMATIC GENERATIONAL TRACKING OF CELL DIVISION OF ESCHERICHIA COLI. A Thesis. MULTIPHASE LEVEL SET EVOLUTION WITH APPLICATIONS TO AUTOMATIC GENERATIONAL TRACKING OF CELL DIVISION OF ESCHERICHIA COLI A Thesis Presented to the Faculty of San Diego State University In Partial Fulfillment

More information

THE TASK of unsupervised texture segmentation has been

THE TASK of unsupervised texture segmentation has been IEEE TRANSACTIONS ON IMAGE PROCESSING, VOL. 15, NO. 6, JUNE 2006 1633 Integrated Active Contours for Texture Segmentation Chen Sagiv, Nir A. Sochen, and Yehoshua Y. Zeevi Abstract We address the issue

More information

Keywords: active contours; image segmentation; level sets; PDM; GDM; watershed segmentation.

Keywords: active contours; image segmentation; level sets; PDM; GDM; watershed segmentation. IJESRT INTERNATIONAL JOURNAL OF ENGINEERING SCIENCES & RESEARCH TECHNOLOGY Study of Active Contour Modelling for Image Segmentation: A Review Jaspreet Kaur Department of Computer Science & Engineering

More information

Research Article Local- and Global-Statistics-Based Active Contour Model for Image Segmentation

Research Article Local- and Global-Statistics-Based Active Contour Model for Image Segmentation Mathematical Problems in Engineering Volume 2012, Article ID 791958, 16 pages doi:10.1155/2012/791958 Research Article Local- and Global-Statistics-Based Active Contour Model for Image Segmentation Boying

More information

Brain Structure Segmentation from MRI by Geometric Surface Flow

Brain Structure Segmentation from MRI by Geometric Surface Flow Brain Structure Segmentation from MRI by Geometric Surface Flow Greg Heckenberg Yongjian Xi Ye Duan Jing Hua University of Missouri at Columbia Wayne State University Abstract In this paper, we present

More information

Numerische Mathematik

Numerische Mathematik Numer. Math. (1997) 77: 423 451 Numerische Mathematik c Springer-Verlag 1997 Electronic Edition Minimal surfaces: a geometric three dimensional segmentation approach Vicent Caselles 1, Ron Kimmel 2, Guillermo

More information

SELF-ORGANIZING APPROACH TO LEARN A LEVEL-SET FUNCTION FOR OBJECT SEGMENTATION IN COMPLEX BACKGROUND ENVIRONMENTS

SELF-ORGANIZING APPROACH TO LEARN A LEVEL-SET FUNCTION FOR OBJECT SEGMENTATION IN COMPLEX BACKGROUND ENVIRONMENTS SELF-ORGANIZING APPROACH TO LEARN A LEVEL-SET FUNCTION FOR OBJECT SEGMENTATION IN COMPLEX BACKGROUND ENVIRONMENTS Dissertation Submitted to The School of Engineering of the UNIVERSITY OF DAYTON In Partial

More information

Segmentation. Namrata Vaswani,

Segmentation. Namrata Vaswani, Segmentation Namrata Vaswani, namrata@iastate.edu Read Sections 5.1,5.2,5.3 of [1] Edge detection and filtering : Canny edge detection algorithm to get a contour of the object boundary Hough transform:

More information

Level-set MCMC Curve Sampling and Geometric Conditional Simulation

Level-set MCMC Curve Sampling and Geometric Conditional Simulation Level-set MCMC Curve Sampling and Geometric Conditional Simulation Ayres Fan John W. Fisher III Alan S. Willsky February 16, 2007 Outline 1. Overview 2. Curve evolution 3. Markov chain Monte Carlo 4. Curve

More information

Dr. Ulas Bagci

Dr. Ulas Bagci Lecture 9: Deformable Models and Segmentation CAP-Computer Vision Lecture 9-Deformable Models and Segmentation Dr. Ulas Bagci bagci@ucf.edu Lecture 9: Deformable Models and Segmentation Motivation A limitation

More information

Multiple Motion and Occlusion Segmentation with a Multiphase Level Set Method

Multiple Motion and Occlusion Segmentation with a Multiphase Level Set Method Multiple Motion and Occlusion Segmentation with a Multiphase Level Set Method Yonggang Shi, Janusz Konrad, W. Clem Karl Department of Electrical and Computer Engineering Boston University, Boston, MA 02215

More information

Eindhoven University of Technology MASTER. Cell segmentation using level set method. Zhou, Y. Award date: Link to publication

Eindhoven University of Technology MASTER. Cell segmentation using level set method. Zhou, Y. Award date: Link to publication Eindhoven University of Technology MASTER Cell segmentation using level set method Zhou, Y Award date: 2007 Link to publication Disclaimer This document contains a student thesis (bachelor's or master's),

More information

Automatic Logo Detection and Removal

Automatic Logo Detection and Removal Automatic Logo Detection and Removal Miriam Cha, Pooya Khorrami and Matthew Wagner Electrical and Computer Engineering Carnegie Mellon University Pittsburgh, PA 15213 {mcha,pkhorrami,mwagner}@ece.cmu.edu

More information

Finding a Needle in a Haystack: An Image Processing Approach

Finding a Needle in a Haystack: An Image Processing Approach Finding a Needle in a Haystack: An Image Processing Approach Emily Beylerian Advisor: Hayden Schaeffer University of California, Los Angeles Department of Mathematics Abstract Image segmentation (also

More information

Geodesic Active Contours

Geodesic Active Contours International Journal of Computer Vision 22(1), 61 79 (1997) c 1997 Kluwer Academic Publishers. Manufactured in The Netherlands. Geodesic Active Contours VICENT CASELLES Department of Mathematics and Informatics,

More information

NSCT BASED LOCAL ENHANCEMENT FOR ACTIVE CONTOUR BASED IMAGE SEGMENTATION APPLICATION

NSCT BASED LOCAL ENHANCEMENT FOR ACTIVE CONTOUR BASED IMAGE SEGMENTATION APPLICATION DOI: 10.1917/ijivp.010.0004 NSCT BASED LOCAL ENHANCEMENT FOR ACTIVE CONTOUR BASED IMAGE SEGMENTATION APPLICATION Hiren Mewada 1 and Suprava Patnaik Department of Electronics Engineering, Sardar Vallbhbhai

More information

Key words. Level set, energy minimizing, partial differential equations, segmentation.

Key words. Level set, energy minimizing, partial differential equations, segmentation. A VARIANT OF THE LEVEL SET METHOD AND APPLICATIONS TO IMAGE SEGMENTATION JOHAN LIE, MARIUS LYSAKER, AND XUE-CHENG TAI Abstract. In this paper we propose a variant of the level set formulation for identifying

More information

Geodesic Active Regions for Tracking I.N.R.I.A Sophia Antipolis CEDEX, France.

Geodesic Active Regions for Tracking I.N.R.I.A Sophia Antipolis CEDEX, France. Geodesic Active Regions for Tracking Nikos Paragios? Rachid Deriche I.N.R.I.A BP. 93, 24 Route des Lucioles 692 Sophia Antipolis CEDEX, France e-mail: fnparagio,derg@sophia.inria.fr Abstract. In this paper

More information

Moving object segmentation using optical flow with active contour model

Moving object segmentation using optical flow with active contour model Moving object segmentation using optical flow with active contour model Youssef Zinbi, Youssef Chahir, Abderrahim Elmoataz To cite this version: Youssef Zinbi, Youssef Chahir, Abderrahim Elmoataz. Moving

More information

Segmentation and Registration of Lung Images Using Level-Set Methods

Segmentation and Registration of Lung Images Using Level-Set Methods Segmentation and Registration of Lung Images Using Level-Set Methods Piotr Świerczyński St Hilda s College University of Oxford A thesis submitted in partial fulfilment for the degree of Master of Sciences

More information

The Level Set Method. Lecture Notes, MIT J / 2.097J / 6.339J Numerical Methods for Partial Differential Equations

The Level Set Method. Lecture Notes, MIT J / 2.097J / 6.339J Numerical Methods for Partial Differential Equations The Level Set Method Lecture Notes, MIT 16.920J / 2.097J / 6.339J Numerical Methods for Partial Differential Equations Per-Olof Persson persson@mit.edu March 7, 2005 1 Evolving Curves and Surfaces Evolving

More information

Segmentation of Three Dimensional Cell Culture Models from a Single Focal Plane

Segmentation of Three Dimensional Cell Culture Models from a Single Focal Plane Segmentation of Three Dimensional Cell Culture Models from a Single Focal Plane Hang Chang 1,2 and Bahram Parvin 1 1 Lawrence Berkeley National Laboratory, Berkeley, CA 94720 2 Institute of Automation,

More information

J. Douglas Birdwell, Major Professor. Seddik M. Djouadi, Coadvisor. We have read this dissertation and recommend its acceptance:

J. Douglas Birdwell, Major Professor. Seddik M. Djouadi, Coadvisor. We have read this dissertation and recommend its acceptance: To the Graduate Council: I am submitting herewith a dissertation written by Yongsheng Pan entitled Image Segmentation using PDE, Variational, Morphological and Probabilistic Methods. I have examined the

More information

Multimodality Imaging for Tumor Volume Definition in Radiation Oncology

Multimodality Imaging for Tumor Volume Definition in Radiation Oncology 81 There are several commercial and academic software tools that support different segmentation algorithms. In general, commercial software packages have better implementation (with a user-friendly interface

More information

Geodesic Active Contours with Combined Shape and Appearance Priors

Geodesic Active Contours with Combined Shape and Appearance Priors Geodesic Active Contours with Combined Shape and Appearance Priors Rami Ben-Ari 1 and Dror Aiger 1,2 1 Orbotech LTD, Yavneh, Israel 2 Ben Gurion University, Be er Sheva, Israel {rami-ba,dror-ai}@orbotech.com

More information

Unstructured Mesh Generation for Implicit Moving Geometries and Level Set Applications

Unstructured Mesh Generation for Implicit Moving Geometries and Level Set Applications Unstructured Mesh Generation for Implicit Moving Geometries and Level Set Applications Per-Olof Persson (persson@mit.edu) Department of Mathematics Massachusetts Institute of Technology http://www.mit.edu/

More information

Normalized cuts and image segmentation

Normalized cuts and image segmentation Normalized cuts and image segmentation Department of EE University of Washington Yeping Su Xiaodan Song Normalized Cuts and Image Segmentation, IEEE Trans. PAMI, August 2000 5/20/2003 1 Outline 1. Image

More information

Level set methods Formulation of Interface Propagation Boundary Value PDE Initial Value PDE Motion in an externally generated velocity field

Level set methods Formulation of Interface Propagation Boundary Value PDE Initial Value PDE Motion in an externally generated velocity field Level Set Methods Overview Level set methods Formulation of Interface Propagation Boundary Value PDE Initial Value PDE Motion in an externally generated velocity field Convection Upwind ddifferencingi

More information

A Region Merging Prior for Variational Level Set Image Segmentation Ismail Ben Ayed, Member, IEEE, and Amar Mitiche, Member, IEEE

A Region Merging Prior for Variational Level Set Image Segmentation Ismail Ben Ayed, Member, IEEE, and Amar Mitiche, Member, IEEE IEEE TRANSACTIONS ON IMAGE PROCESSING, VOL. 17, NO. 12, DECEMBER 2008 2301 A Region Merging Prior for Variational Level Set Image Segmentation Ismail Ben Ayed, Member, IEEE, and Amar Mitiche, Member, IEEE

More information

NIH Public Access Author Manuscript Proc Soc Photo Opt Instrum Eng. Author manuscript; available in PMC 2014 October 07.

NIH Public Access Author Manuscript Proc Soc Photo Opt Instrum Eng. Author manuscript; available in PMC 2014 October 07. NIH Public Access Author Manuscript Published in final edited form as: Proc Soc Photo Opt Instrum Eng. 2014 March 21; 9034: 903442. doi:10.1117/12.2042915. MRI Brain Tumor Segmentation and Necrosis Detection

More information

Level set segmentation using non-negative matrix factorization with application to brain MRI

Level set segmentation using non-negative matrix factorization with application to brain MRI Rowan University Rowan Digital Works Theses and Dissertations 7-29-2015 Level set segmentation using non-negative matrix factorization with application to brain MRI Dimah Dera Follow this and additional

More information

Interactive Image Segmentation Using Level Sets and Dempster-Shafer Theory of Evidence

Interactive Image Segmentation Using Level Sets and Dempster-Shafer Theory of Evidence Interactive Image Segmentation Using Level Sets and Dempster-Shafer Theory of Evidence Björn Scheuermann and Bodo Rosenhahn Leibniz Universität Hannover, Germany {scheuermann,rosenhahn}@tnt.uni-hannover.de

More information

A Region based Active contour Approach for Liver CT Image Analysis driven by fractional order image fitting energy

A Region based Active contour Approach for Liver CT Image Analysis driven by fractional order image fitting energy 017 IJEDR Volume 5, Issue ISSN: 31-9939 A Region based Active contour Approach for Liver CT Image Analysis driven by fractional order image fitting energy 1 Sajith A.G, Dr.Hariharan S, 1 Research Scholar,

More information

Fast and Hybrid Image Segmentation Based on Level set and Normalized Graph Cut

Fast and Hybrid Image Segmentation Based on Level set and Normalized Graph Cut International Journal of Computer Systems (ISSN: 2394-1065), Volume 04 Issue 02, February, 2017 Available at http://www.ijcsonline.com/ Fast and Hybrid Image Segmentation Based on Level set and Normalized

More information

COMPUTER VISION > OPTICAL FLOW UTRECHT UNIVERSITY RONALD POPPE

COMPUTER VISION > OPTICAL FLOW UTRECHT UNIVERSITY RONALD POPPE COMPUTER VISION 2017-2018 > OPTICAL FLOW UTRECHT UNIVERSITY RONALD POPPE OUTLINE Optical flow Lucas-Kanade Horn-Schunck Applications of optical flow Optical flow tracking Histograms of oriented flow Assignment

More information

A Geometric Flow Approach for Region-based Image Segmentation

A Geometric Flow Approach for Region-based Image Segmentation A Geometric Flow Approach for Region-based Image Segmentation Juntao Ye Institute of Automation, Chinese Academy of Sciences, Beijing, China juntao.ye@ia.ac.cn Guoliang Xu Institute of Computational Mathematics

More information

Mixture Models and EM

Mixture Models and EM Mixture Models and EM Goal: Introduction to probabilistic mixture models and the expectationmaximization (EM) algorithm. Motivation: simultaneous fitting of multiple model instances unsupervised clustering

More information

Region Based Image Segmentation using a Modified Mumford-Shah Algorithm

Region Based Image Segmentation using a Modified Mumford-Shah Algorithm Region Based Image Segmentation using a Modified Mumford-Shah Algorithm Jung-ha An and Yunmei Chen 2 Institute for Mathematics and its Applications (IMA), University of Minnesota, USA, 2 Department of

More information

ACTIVE CONTOURS BASED OBJECT DETECTION & EXTRACTION USING WSPF PARAMETER: A NEW LEVEL SET METHOD

ACTIVE CONTOURS BASED OBJECT DETECTION & EXTRACTION USING WSPF PARAMETER: A NEW LEVEL SET METHOD ACTIVE CONTOURS BASED OBJECT DETECTION & EXTRACTION USING WSPF PARAMETER: A NEW LEVEL SET METHOD Savan Oad 1, Ambika Oad 2, Abhinav Bhargava 1, Samrat Ghosh 1 1 Department of EC Engineering, GGITM, Bhopal,

More information

Image Analysis Lecture Segmentation. Idar Dyrdal

Image Analysis Lecture Segmentation. Idar Dyrdal Image Analysis Lecture 9.1 - Segmentation Idar Dyrdal Segmentation Image segmentation is the process of partitioning a digital image into multiple parts The goal is to divide the image into meaningful

More information

Γ -Convergence Approximation to Piecewise Constant Mumford-Shah Segmentation

Γ -Convergence Approximation to Piecewise Constant Mumford-Shah Segmentation Γ -Convergence Approximation to Piecewise Constant Mumford-Shah Segmentation Jianhong Shen University of Minnesota, Minneapolis, MN 55455, USA jhshen@math.umn.edu http://www.math.umn.edu/~jhshen Abstract.

More information

ELEC Dr Reji Mathew Electrical Engineering UNSW

ELEC Dr Reji Mathew Electrical Engineering UNSW ELEC 4622 Dr Reji Mathew Electrical Engineering UNSW Review of Motion Modelling and Estimation Introduction to Motion Modelling & Estimation Forward Motion Backward Motion Block Motion Estimation Motion

More information

Edge and local feature detection - 2. Importance of edge detection in computer vision

Edge and local feature detection - 2. Importance of edge detection in computer vision Edge and local feature detection Gradient based edge detection Edge detection by function fitting Second derivative edge detectors Edge linking and the construction of the chain graph Edge and local feature

More information

IEEE TRANSACTIONS ON IMAGE PROCESSING, VOL. 17, NO. 5, MAY

IEEE TRANSACTIONS ON IMAGE PROCESSING, VOL. 17, NO. 5, MAY IEEE TRANSACTIONS ON IMAGE PROCESSING, VOL. 17, NO. 5, MAY 2008 645 A Real-Time Algorithm for the Approximation of Level-Set-Based Curve Evolution Yonggang Shi, Member, IEEE, and William Clem Karl, Senior

More information

Operators-Based on Second Derivative double derivative Laplacian operator Laplacian Operator Laplacian Of Gaussian (LOG) Operator LOG

Operators-Based on Second Derivative double derivative Laplacian operator Laplacian Operator Laplacian Of Gaussian (LOG) Operator LOG Operators-Based on Second Derivative The principle of edge detection based on double derivative is to detect only those points as edge points which possess local maxima in the gradient values. Laplacian

More information

Real-Time Visual Tracking Using Image Processing and Filtering Methods. Jin-cheol Ha

Real-Time Visual Tracking Using Image Processing and Filtering Methods. Jin-cheol Ha Real-Time Visual Tracking Using Image Processing and Filtering Methods A Thesis Presented to The Academic Faculty by Jin-cheol Ha In Partial Fulfillment of the Requirements for the Degree Doctor of Philosophy

More information

A STUDY AND ANALYSIS OF DIFFERENT EDGE DETECTION TECHNIQUES

A STUDY AND ANALYSIS OF DIFFERENT EDGE DETECTION TECHNIQUES A STUDY AND ANALYSIS OF DIFFERENT EDGE DETECTION TECHNIQUES Gullanar M. Hadi 1 and Nassir H. Salman 2 1 Department of Software Engineering, Salahaddin University,Erbil, Iraq gullanarm@yahoo.com 2 Department

More information

Models. Xiaolei Huang, Member, IEEE, and Dimitris Metaxas, Senior Member, IEEE. Abstract

Models. Xiaolei Huang, Member, IEEE, and Dimitris Metaxas, Senior Member, IEEE. Abstract Metamorphs: Deformable Shape and Appearance Models Xiaolei Huang, Member, IEEE, and Dimitris Metaxas, Senior Member, IEEE Abstract This paper presents a new deformable modeling strategy aimed at integrating

More information

1486 IEEE TRANSACTIONS ON IMAGE PROCESSING, VOL. 14, NO. 10, OCTOBER 2005

1486 IEEE TRANSACTIONS ON IMAGE PROCESSING, VOL. 14, NO. 10, OCTOBER 2005 1486 IEEE TRANSACTIONS ON IMAGE PROCESSING, VOL. 14, NO. 10, OCTOBER 2005 A Nonparametric Statistical Method for Image Segmentation Using Information Theory and Curve Evolution Junmo Kim, Member, IEEE,

More information

A Toolbox of Level Set Methods

A Toolbox of Level Set Methods A Toolbox of Level Set Methods Ian Mitchell Department of Computer Science University of British Columbia http://www.cs.ubc.ca/~mitchell mitchell@cs.ubc.ca research supported by the Natural Science and

More information

Lagrange multipliers October 2013

Lagrange multipliers October 2013 Lagrange multipliers 14.8 14 October 2013 Example: Optimization with constraint. Example: Find the extreme values of f (x, y) = x + 2y on the ellipse 3x 2 + 4y 2 = 3. 3/2 1 1 3/2 Example: Optimization

More information

1. Two double lectures about deformable contours. 4. The transparencies define the exam requirements. 1. Matlab demonstration

1. Two double lectures about deformable contours. 4. The transparencies define the exam requirements. 1. Matlab demonstration Practical information INF 5300 Deformable contours, I An introduction 1. Two double lectures about deformable contours. 2. The lectures are based on articles, references will be given during the course.

More information

Implicit Active Model using Radial Basis Function Interpolated Level Sets

Implicit Active Model using Radial Basis Function Interpolated Level Sets Implicit Active Model using Radial Basis Function Interpolated Level Sets Xianghua Xie and Majid Mirmehdi Department of Computer Science University of Bristol, Bristol BS8 1UB, England. {xie,majid}@cs.bris.ac.uk

More information

Continuous and Discrete Optimization Methods in Computer Vision. Daniel Cremers Department of Computer Science University of Bonn

Continuous and Discrete Optimization Methods in Computer Vision. Daniel Cremers Department of Computer Science University of Bonn Continuous and Discrete Optimization Methods in Computer Vision Daniel Cremers Department of Computer Science University of Bonn Oxford, August 16 2007 Segmentation by Energy Minimization Given an image,

More information

Local Binary Signed Pressure Force Function Based Variation Segmentation Model.

Local Binary Signed Pressure Force Function Based Variation Segmentation Model. Journal of Information & Communication Technology Vol. 9, No. 1, (Spring2015) 01-12 Local Binary Signed Pressure Force Function Based Variation Segmentation Model. Tariq Ali * Institute of Social Policy

More information

Chapter 3. Automated Segmentation of the First Mitotic Spindle in Differential Interference Contrast Microcopy Images of C.

Chapter 3. Automated Segmentation of the First Mitotic Spindle in Differential Interference Contrast Microcopy Images of C. Chapter 3 Automated Segmentation of the First Mitotic Spindle in Differential Interference Contrast Microcopy Images of C. elegans Embryos Abstract Differential interference contrast (DIC) microscopy is

More information

Chapter 9 Object Tracking an Overview

Chapter 9 Object Tracking an Overview Chapter 9 Object Tracking an Overview The output of the background subtraction algorithm, described in the previous chapter, is a classification (segmentation) of pixels into foreground pixels (those belonging

More information

Breaking Wave Velocity Estimation. Final Report. ME Machine Vision

Breaking Wave Velocity Estimation. Final Report. ME Machine Vision Breaking Wave Velocity Estimation Final Report ME6406 - Machine Vision Instructor: Dr. Wayne Daley Nathan Young December 7 th, 2007 Table of Contents: Motivation:... 4 1 Problem Definition:... 4 Problem

More information

Learning How to Inpaint from Global Image Statistics

Learning How to Inpaint from Global Image Statistics Learning How to Inpaint from Global Image Statistics Anat Levin Assaf Zomet Yair Weiss School of Computer Science and Engineering, The Hebrew University of Jerusalem, 9194, Jerusalem, Israel E-Mail: alevin,zomet,yweiss

More information

Lagrange multipliers 14.8

Lagrange multipliers 14.8 Lagrange multipliers 14.8 14 October 2013 Example: Optimization with constraint. Example: Find the extreme values of f (x, y) = x + 2y on the ellipse 3x 2 + 4y 2 = 3. 3/2 Maximum? 1 1 Minimum? 3/2 Idea:

More information

B. Tech. Project Second Stage Report on

B. Tech. Project Second Stage Report on B. Tech. Project Second Stage Report on GPU Based Active Contours Submitted by Sumit Shekhar (05007028) Under the guidance of Prof Subhasis Chaudhuri Table of Contents 1. Introduction... 1 1.1 Graphic

More information

Image Processing

Image Processing Image Processing 159.731 Canny Edge Detection Report Syed Irfanullah, Azeezullah 00297844 Danh Anh Huynh 02136047 1 Canny Edge Detection INTRODUCTION Edges Edges characterize boundaries and are therefore

More information

SEGMENTATION is a fundamental low-level processing

SEGMENTATION is a fundamental low-level processing IEEE TRANSACTIONS ON IMAGE PROCESSING, VOL. 15, NO. 11, NOVEMBER 2006 3431 Unsupervised Variational Image Segmentation/Classification Using a Weibull Observation Model Ismail Ben Ayed, Student Member,

More information

Kernel Density Estimation and Intrinsic Alignment for Knowledge-driven Segmentation: Teaching Level Sets to Walk

Kernel Density Estimation and Intrinsic Alignment for Knowledge-driven Segmentation: Teaching Level Sets to Walk C. Rasmussen et al. (Eds.), Pattern Recognition, Tübingen, Sept. 2004. LNCS Vol. 3175, pp. 36 44. c Springer Kernel Density Estimation and Intrinsic Alignment for Knowledge-driven Segmentation: Teaching

More information

Boundary descriptors. Representation REPRESENTATION & DESCRIPTION. Descriptors. Moore boundary tracking

Boundary descriptors. Representation REPRESENTATION & DESCRIPTION. Descriptors. Moore boundary tracking Representation REPRESENTATION & DESCRIPTION After image segmentation the resulting collection of regions is usually represented and described in a form suitable for higher level processing. Most important

More information

Automatically Extracting Cellular Structures from Images Generated via Electron Microscopy

Automatically Extracting Cellular Structures from Images Generated via Electron Microscopy Automatically Extracting Cellular Structures from Images Generated via Electron Microscopy Alejandro Cantarero Department of Computer Science University of Colorado, Boulder May 9, 2005 1 Introduction

More information

Mathematically, the path or the trajectory of a particle moving in space in described by a function of time.

Mathematically, the path or the trajectory of a particle moving in space in described by a function of time. Module 15 : Vector fields, Gradient, Divergence and Curl Lecture 45 : Curves in space [Section 45.1] Objectives In this section you will learn the following : Concept of curve in space. Parametrization

More information

Applying Catastrophe Theory to Image Segmentation

Applying Catastrophe Theory to Image Segmentation Applying Catastrophe Theory to Image Segmentation Mohamad Raad, Majd Ghareeb, Ali Bazzi Department of computer and communications engineering Lebanese International University Beirut, Lebanon Abstract

More information

Converting Level Set Gradients to Shape Gradients

Converting Level Set Gradients to Shape Gradients Converting Level Set Gradients to Shape Gradients Siqi Chen 1, Guillaume Charpiat 2, and Richard J. Radke 1 1 Department of ECSE, Rensselaer Polytechnic Institute, Troy, NY, USA chens@rpi.edu, rjradke@ecse.rpi.edu

More information

Other Linear Filters CS 211A

Other Linear Filters CS 211A Other Linear Filters CS 211A Slides from Cornelia Fermüller and Marc Pollefeys Edge detection Convert a 2D image into a set of curves Extracts salient features of the scene More compact than pixels Origin

More information

Lecture 7: Most Common Edge Detectors

Lecture 7: Most Common Edge Detectors #1 Lecture 7: Most Common Edge Detectors Saad Bedros sbedros@umn.edu Edge Detection Goal: Identify sudden changes (discontinuities) in an image Intuitively, most semantic and shape information from the

More information