Titelmaster. The benefit of plant models for laser generated data. - advantages of a symbiosis Dipl. Inf. Stefan Paulus

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1 Titelmaster The benefit of plant models for laser generated data - advantages of a symbiosis Dipl. Inf. Stefan Paulus Institute of Geodesy und Geoinformation Professorship of Geodesy University of Bonn Dipl. Inform. StefanKuhlmann Paulus Prof. Dr. Heiner

2 overview state of the art motivation problems and difficulties benefit of models perspective 2

3 state of the art Laserscanning of plants with airborne laserscanners inertial system + GPS with ground based laserscanner time of flight phase shift in the laboratory triangulation structed light with different geometric 3 approaches Omasa 2007

4 state of the art Extraction of various parameters: canopy height / mean tree height distribution of leaf area in space gap propability Omasa Omasa 2007 breast hight, diameter carbon stocks from biomass estimation shape analysis Omasa 2007 Omasa 2007 Hosoi 2011

5 state of the art High resolution laser scanning of plants 5 Perceptron 2008

6 motivation today: Derivation of morphological characteristics Sensor fusion with RGB/IR/hyperspectral camera data Reference system for calibration of other sensors Observation of smallest changes to quantify plant response to changes 500 in environment ] t[m ig e h ] time e[d m lu vo time

7 motivation In future: usage directly in the field target-actual comparison prediction of parameters due to environment adjustement of application and geometry 7 Interaction is needed here! Volume [dm³] time Llorens 2011

8 problems and difficulties 1. Plant motion due to growth and vibrations 8 2. Change of plant structure und arrangement

9 problems and difficulties 3. Occlusion due to sensor range and structure Perceptron Penetration of the laser beam and the plant surface Rascher 2010

10 benefit of models In short: penetration occlusion change in structure plant motion improve the technique????????? Benefit of physical (or FSPM) models coordinate system for the plant knowledge of structure independant from sensor connection between parts is known, this enables tracking phyto-reference-system 10

11 benefit of models 11. laserscan s mode l

12 benefit of models resolution accuracy geometry deformation geometry parameters laserscan s prediction structure & connection interaction growth & development 12 mode l high resolution plant puzzle aligned by underlying grammar system

13 benefit of models local data can be aligned to the whole structure by this, motion can be eliminated resp. is less disturbing different sensors like RGB or hyperspectral camera can be fused in a more accurate way 13

14 The idea in short Laserscans Problem s Laser penetration Occlussions Accuracy Resolution Parameter Model Errors Errors Uncertainty no data 14

15 The idea in short Problem s Laserscans Parameter Pre-Model Model Improved Parameters Improved Laserdata advance prediction sensor crossing less errors Reliability Testing Errors advance plant coordinate system less occlussion better data connection 15

16 with an application Laserscans Parameter Pre-Model Reliability Improved Parameters Model Improved Laserdata 16

17 perspective better results for known techniques laserscanning under difficult circumstances parameter extraction under bad point cloud conditions 17

18 perspective better classification results for automated classification 18 leaf / stem classification by using SVM

19 questions? 19 Thanks for your attention. Feel free to ask!

20 Abstract Laserscanning im Pflanzenbereich bietet höchste Auflösungen bei gleichzeitiger nicht invasiver Messung. Aus den resultierenden Punktwolken lassen sich Parameter ableiten, aus denen der Zustand der Pflanze bzgl. bspw. Trockenstress hervorgeht. Probleme ergeben sich aus der Eigenbewegung der Pflanze, der Dimension der Deformation (Wachstum und äußere Einflüsse), sowie einer unzureichenden 3D Zuordnung, die Fusion verschiedener Sensoren und Teilscans sowie Vergleich zu unterschiedlichen Zeitpunkten erschweren. Pflanzenmodelle bieten hier Lösungen durch Pflanzen-bezogene Koordinatensysteme, die zeitlich und räumliche Zuordnungen ermöglichen. Laserscanning of plants provides highly accurate spatial resolution information together with noninvasive measurements. The resulting point cloud can be used to extract parameters describing plant state changes in response to i.e. drought stress. Problems resulting from plant motion, dimension of deformation caused by growth and outer influences as well as from insufficient 3D correspondence of scan parts among each other, complicates fusion of different sensors and scan parts and also the comparison of data of different dates. Plant models are solutions to these problems by providing plant-applied coordinate systems that enable spatio-temporal registration. 20

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