A FRAMEWORK FOR ONTOLOGY-BASED LIBRARY DATA GENERATION, ACCESS AND EXPLOITATION

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1 A FRAMEWORK FOR ONTOLOGY-BASED LIBRARY DATA GENERATION, ACCESS AND EXPLOITATION Daniel Vila Suero Advisors: Prof. Dr. Asunción Gómez-Pérez and Dr. Jorge Gracia del Río PhD in Artificial Intelligence, Defense, Madrid, 27 th of July 2016

2 CONTEXT Classify Catalogue! Information resources! Libraries! experts! Digital Catalogues (Limited semantics)! records describing persons, concepts, works, and other entities. MARC 21 international standard describing millions of records. (e.g., European +80 million records) 2

3 CONTEXT CATALOGUE RESOURCES ARE DISCONNECTED FROM THE WEB Online catalogues! WWW! Web forms HTML! Specialized users Applications Search engines 3

4 CONTEXT CATALOGUE RESOURCES ARE DISCONNECTED FROM THE WEB?! Online catalogues! WWW! Web forms HTML! Specialized users Applications Search engines creator of! topic! semantics! reusability! same as! discoverability! Semantic web and Linked Data technologies (Ontologies, RDF, HTTP URIs): Creating and delivering library data while providing a natural extension to the collaborative sharing models historically employed by libraries. My thesis! 4

5 OUTLINE Problem and state of the art Research methodology and hypotheses Contributions Mapping Ontology development applications Conclusion and future directions 5

6 INTRODUCTION RESEARCH PROBLEM Catalogues! ONTOLOGIES RDF HTTP URIS! PRINCIPLED TRANSFORMATION OF LIBRARY CATALOGUES INTO ONTOLOGY-BASED DATA AND THEIR PUBLICATION AND CONSUMPTION ON THE WEB.! WWW! 6

7 INTRODUCTION THE PROBLEM: GLOBAL-AS-VIEW ONTOLOGY-BASED DATA INTEGRATION SOURCE SCHEMA! GLOBAL SCHEMA! creator of! MAPPING! same as! topic! Data sources (MARC 21)! CHALLENGES 1. records present a nested structure (fields, subfields, etc.) 2. data sources lack schema and query mechanisms 3. standards and ontologies are highly specialized Target (RDF Linked Data)! 7

8 INTRODUCTION RESEARCH PROBLEM AND AREAS Catalogues! ONTOLOGIES RDF HTTP URIS! PRINCIPLED TRANSFORMATION OF LIBRARY CATALOGUES INTO ONTOLOGY-BASED DATA AND THEIR PUBLICATION AND CONSUMPTION ON THE WEB.! TRANSFORMATION & MAPPING LANGUAGES! ONTOLOGY DEVELOPMENT! WWW! LIBRARY APPLICATIONS! 8

9 INTRODUCTION STATE OF THE ART FRBR model! Experiments FRBR! Applications of RDF! Linked Data! TRANSFORMATION METHODS! 1998! [Hickey2002] [Bennet2003] [Hegna2003]! [Aalberg2006] [Manguinhas2010] 2012 [Takhirov2012] [Simon2013] [marc2bibframe2015] 9

10 INTRODUCTION STATE OF THE ART FRBR model! Experiments FRBR! Applications of RDF! Linked Data! TRANSFORMATION METHODS! 1998! 2012 MAPPING LANGUAGES! Relational databases into RDF! 2004! [Barrasa04] [Bizer04] R2RML W3C standard! 2014 Extensions of R2RML for non-rdb data sources! RML [Dimou2014] xr2rml [Michel2015] KR2RML [Slepicka2015] 10

11 INTRODUCTION STATE OF THE ART FRBR model! Experiments FRBR! Applications of RDF! Linked Data! TRANSFORMATION METHODS! 1998! 2012 MAPPING LANGUAGES! Relational databases into RDF! 2004! R2RML W3C standard! 2014 Extensions of R2RML for non-rdb data sources! ONTOLOGY DEVELOPMENT! Initial methodologies! 1995! [Grüninger1995] [Fernández-López1997] Ontology lifecycle models! [Staab2001] [Pinto2004] Neon methodology [Suarez-Figueroa2015] Agile approaches! [Auer2006] [Presutti2012]

12 LIMITATION 1: MAPPING LANGUAGE AND METHODS INTRODUCTION TRANSFORMATION MAPPING LANGUAGES ONTOLOGY DEVELOPMENT! LIBRARY LINKED DATA APPLICATIONS! Lack of interoperability and reuse of mapping rules.! 12

13 LIMITATION 1: MAPPING LANGUAGE AND METHODS INTRODUCTION TRANSFORMATION MAPPING LANGUAGES ONTOLOGY DEVELOPMENT! LIBRARY LINKED DATA APPLICATIONS! Lack of interoperability and reuse of mapping rules.! Format-dependent (e.g., JSONPath) [RML] [xr2rml]!! Lack of queries over nested data [KR2RML]! 13

14 LIMITATION 2: FEEDBACK OF LIBRARY EXPERTS INTRODUCTION TRANSFORMATION MAPPING LANGUAGES ONTOLOGY DEVELOPMENT! LIBRARY LINKED DATA APPLICATIONS! Lack of interoperability and reuse of mapping rules.! Format-dependent (e.g., JSONPath)! Feedback of library experts not integrated within the transformation process. [Takhirov2012] Lack of queries over nested data! 14

15 LIMITATION 2: FEEDBACK OF LIBRARY EXPERTS INTRODUCTION TRANSFORMATION MAPPING LANGUAGES ONTOLOGY DEVELOPMENT! LIBRARY LINKED DATA APPLICATIONS! Lack of interoperability and reuse of mapping rules.! Format-dependent (e.g., JSONPath)! Limited technical support for the active participation of domain experts. [NeOn]! Feedback of library experts not integrated within the transformation process. [Takhirov2012] Lack of queries over nested data! Limited methods for understanding similarities among overlapping ontologies. [Vandenbussche2014] 15

16 INTRODUCTION LIMITATION 3: EXPERIMENTAL RESULTS TRANSFORMATION MAPPING LANGUAGES ONTOLOGY DEVELOPMENT! LIBRARY LINKED DATA APPLICATIONS! Lack of interoperability and reuse of mapping rules.! Format-dependent (e.g., JSONPath)! Limited technical support for the active participation of domain experts.! Lack of evaluation and experimental results of impact in end-user library applications [Simon2013] Feedback of library experts not integrated within the transformation process. Lack of queries over nested data! Limited methods for understanding similarities among overlapping ontologies. 16

17 HYPOTHESES Research methodology, and hypotheses 17

18 HYPOTHESES DESIGN-SCIENCE RESEARCH METHODOLOGY RESEARCH PROBLEMS HYPOTHESES EVALUATION CONTRIBUTIONS! P1 Mapping FORMULATION! EVALUATE HYPOTHESES! P2 Ontology development process P3 H1 H2 H3 H4 H5 applications ARTIFACT: MARIMBA FRAMEWORK! REFINEMENT METHODS MODELS INSTANTIATIONS! 18

19 HYPOTHESES MARIMBA FRAMEWORK: PROBLEMS AND CONTRIBUTIONS marimba-mapping marimba-topicmodel marimba-rml BNE ontology Empirical studies marimba-datamodel P1 Mapping data sources! marimba-modelling P2 Ontology development process Ontology-based data (RDF)! datos.bne.es P3 applications online applications! 19

20 P1: DEFINITION OF INTEROPERABLE MAPPING RULES HYPOTHESES marimba-topicmodel marimba-mapping marimba-rml marimba-datamodel P1 Mapping data sources! BNE ontology H1 H2 marimba-modelling Ontology-based data (RDF)! Empirical studies The structure of MARC 21 records can be fully represented using a nested relational model. datos.bne.es P2 Minimal modifications P3 to the W3C R2RML Ontology development language to define mapping rules between process MARC 21 data sources applications into RDF.! online applications! RESTRICTIONS: No query optimization, only operational semantics of mapping language, authority and bibliographic formats, MARC 21 standard 20

21 HYPOTHESES P2: LIBRARY ONTOLOGY DEVELOPMENT ng model es! BNE ontology marimba-topicmodel marimba-modelling P2 Ontology development process Ontology-based data (RDF)! H3marimba-topicmodel H4 Analytical data and the feedback of library experts can be used to develop a library ontology with sufficient quality BNE ontology marimba-modelling Ontology-based data (RDF)! Empirical studies datos.bne.es Probabilistic topic modelling techniques can P2 P3 Ontology produce coherent descriptions of development ontologies and can perform better than process applications existing methods used in ontology search. online applications! ASSUMPTIONS: Participation of library experts, available library ontologies and records 21

22 HYPOTHESES P3: APPLICATION OF SEMANTIC TECHNOLOGIES IN LIBRARY APPLICATIONS model ling ed RDF)! Empirical studies datos.bne.es P3 applications online applications! The application of semantic technologies to end-user library applications can increase user satisfaction and efficiency for finding information H5marimba-topicmodel BNE ontology marimba-modelling P2 Ontology development process Ontology-based data (RDF)! Empirical studies datos.bne.es P3 applications online applications! RESTRICTIONS: Transformation in a batch process 22

23 OUTLINE marimba-mapping marimba-rml marimba-datamodel P1 Mapping data sources! marimba-topicmodel BNE ontology marimba-modelling P2 Ontology development process Ontology-based data (RDF)! Empirical studies datos.bne.es P3 applications online applications! 23

24 marimba-datamodel MAPPING marimba-mapping marimba-rml?! P1 Mapping SOURCE SCHEMA! GLOBAL SCHEMA! creator of! same as! topic! Data source (MARC 21)! Target source (RDF)! 24

25 MAPPING marimba-mapping marimba-rml Schema extraction marimba-datamodel P1 Mapping SOURCE SCHEMA! GLOBAL SCHEMA! creator of! same as! topic! Data source (MARC 21)! Target source (RDF)! 25

26 MAPPING marimba-datamodel marimba-rml marimba-mapping Study of MARC 21 standard in Nested Relational Model (Makinouchi [1977]). Attributes: Atomic: e.g., Field 001 Relation-valued: e.g., Field 100, 008 Complete coverage of MARC 21 standard elements MARC 21 Format Leader Control Field (fixed-length) Control Field (single-valued) Data Field Subfield Indicators marimba-datamodel (NRM) Relation scheme R(S) relation-valued attribute R leader (S leader ) 2 S with S leader =(p00,p01,p02,...,p23) relation-valued attribute R cf (S cf ) 2 S with S cf =(p00,p01,p02,...,pn) for N positions Atomic attribute cf 2 S relation-valued attribute R df (S df ) 2 S with S cf =(i1,i2,sf1,...,sfn) with i1 and i2 indicators and sf1..sfn the N subfields of the data field Atomic attribute sf in a relation scheme of a data field 2 S df Atomic attributes i1 and i2 in a relation scheme of a data field 2 S df H1 26

27 MAPPING marimba-datamodel marimba-rml marimba-mapping Schema extraction Novel algorithm for schema extraction of MARC 21 records. Support the validation of queries to MARC 21 data. Support the generation of mapping templates for library experts. Complete representation of patterns in existing MARC 21 data sources. SCHEMA TABLE bibliographic ITEM f001 UNIQUE NOT NULL /* C.field Unique ID */ ITEM TABLE leader /* Leader Info about language, etc.*/ ITEM p01 ITEM p23 ITEM TABLE f100 /*Data field Author information */ ITEM a /* Subfield */ ITEM i0 /* Indicator */ 27

28 MAPPING marimba-mapping marimba-rml Schema extraction marimba-datamodel P1 Mapping SOURCE SCHEMA! GLOBAL SCHEMA! R2RML MAPPING!?! topic! creator of! same as! Data source (MARC 21)! Target source (RDF)! 28

29 MAPPING marimba-mapping Schema extraction marimba-datamodel P1 Mapping SOURCE SCHEMA! GLOBAL SCHEMA! R2RML MAPPING! marimba-sql topic! creator of! same as! Data source (MARC 21)! marimba-rml Target source (RDF)! 29

MAPPING marimba-datamodel marimba-rml marimba-mapping marimba-sql Minimal query language based on SQL/NF (Roth et al. [1987]): - Conciseness - Orthogonality of expressions! SFW nested expressions.

30 MAPPING marimba-datamodel marimba-rml marimba-mapping marimba-sql Minimal query language based on SQL/NF (Roth et al. [1987]): - Conciseness - Orthogonality of expressions! SFW nested expressions. /* Selects bibliographic records of type Drawing*/ bibliographic / * SELECT FROM * / WHERE EXISTS / * NESTED EXPRESSION* / (leader WHERE p6 = k" AND p7!= "s") AND / * NESTED EXPRESSION * / EXISTS (f007 WHERE p2 = d ) *BNF grammar provided in Annex I! 30

A framework for ontology-based library data generation, access and exploitation

Universidad Politécnica de Madrid Departamento de Inteligencia Artificial DOCTORADO EN INTELIGENCIA ARTIFICIAL A framework for ontology-based library data generation, access and exploitation Doctoral Dissertation