MegaGauss (MGs) Cluster Design Overview
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1 MegaGauss (MGs) Cluster Design Overview NVIDIA Tesla (Fermi) S2070 Modules Based Solution Version 6 (Apr 27, 2010) Alexander S. Zaytsev <Alexander.S.Zaytsev@gmail.com> p. 1 of 15: "Title"
2 Front view: planar or 4x6 2D-torus layouts (air blanking panels are shown) Open frame rack based layout (final configuration) Rear view: data and power cable organizers Planar (switched fabric based) layout is shown IB switches are not needed for 2D torus layout (KVM switches are moved to their place) QDR IB cables localization A B C D Rack (UPS) IDs 16x PDU 16A 132 power cables: 32x 16A + 100x 10A 110 Ethernet cables (Cat.5, RJ45): 44x 3m + 66x 1.8m (data: 56, aux: 6, console: 28, hw.ctrl.: 24) 64 or 36 QDR IB copper cables 16 FC optical cables (8 Gbps FC each) 4 CX4 copper cables (10 Gbps each) 4 SMF uplinks (10 Gbps each) [ 330 internal cable connections in total ] D C Rack (UPS) IDs B A p. 2 of 15: "MGs overview"
3 Front view: 3x8 2D-torus layout (air blanking panels are shown) Open frame rack based layout (final configuration) Rear view: data and power cable organizers Planar (switched fabric based) layout is shown QDR IB cables localization A B C D Rack (UPS) IDs 16x PDU 16A D C B A Rack (UPS) IDs p. 3 of 15: "MGs (2D-torus: 3x8)"
4 Front view: plain layout Open frame rack based layout (step 1: building 17% testbed) Rear view: data and power cable organizers Planar (switched fabric based) layout A B C D Rack (UPS) IDs 4 x 4 Tesla C2070 GPUs: TFlops (double precision) 18 TFlops (single precision) [ 35 TB of storage in total ] D C B A Hardware overall cost estimate: 349 k$ (10.1 MRub) Rack (UPS) IDs p. 4 of 15: "MGs (step 1)"
5 Annotated rack layout: front view (no blanking panels and cable organizers shown here) Cisco RPS 24x Tesla S2070 Computing Module 2x SATA FC RAID Array (50 TB) 4x APC 20 kva (N+1) 4x L3 Ethernet switch (24 GbE + 2x 10GbE ports each) 2x QDR IB switch (36 ports each) 2x APC KVM (32 RJ45 ports each) 24x 2U TYAN S7025 (S7025WAGM2NR) based server 2x LGA1366 ( Xeon 56xx support: 6 physical / 12 logical cores each), 48 GB DDR3 RAM, 4x PCIe2.0 (x16), 1x PCIe2.0 (x8), 1x PCIe2.0 (x4) 2x Aux. 100 Mbps L2 Ethernet switch 8x APC 5 kva ATS APC Env. Monitoring 4x Storage / UI Server 2x SAS FC RAID Array (12 TB) Specs summary: 24 x 2 x 12 = 576 logical CPU cores (Xeon W5680, 3.3 GHz, 3.8 TFlops) 24 x 4 x 448 = CUDA cores 24 x 24 GB = 0.56 TB of GDDR5 VRAM 24 x 48 GB = 1.13 TB of DDR3 RAM 24 x 80 GB = 1.88 TB on SSD drives (80 mks latency for reading) 4 x 5 x 146 GB = 2.9 TB on 15000rpm SAS drives in RAID6 24 x 146 GB = 3.4 TB on 15000rpm SAS drives in RAID10 12 TB on 10000rpm SAS drives in RAID6 50 TB on 7200rpm SATA drives in RAID6 [ 70 TB of storage in total ] 24 x 4 Tesla C2070 GPUs: TFlops (double precision) 107 TFlops (single precision) Hardware overall cost estimate: Total: 1.23 M$ (35.7 MRub) $ / ( 1 Gflops TB ) for GPU based design (double precision) Compare to $ / GFlops (double precision) for the general purpose CPU based design p. 5 of 15: "Details"
6 TYAN S7025 (S7025WAGM2NR) Layout & Block Diagram p. 6 of 15: "MB generic"
7 24x Computing Nodes 4x Storage / UI Nodes 3x 8 GB DDR x 4 GB DDR XEON X5680 XEON X5650 XEON X5680 XEON X5650 NVIDIA Tesla Uplink 1 3x 8 GB DDR XEON X5650 Mellanox 10GbE HBA (*2) 3x 4 GB DDR IO-Fusion ioextreme Mellanox QDR IB HBA 1 (*1) XEON X5650 Emulex 8 Gbps FC HBA 1 (*2) NVIDIA Tesla Uplink 2 Mellanox QDR IB HBA (*2) Supermicro SAS RAID Controller (*8) Mellanox QDR IB HBA 2 (*1) Supermicro SAS RAID Controller (*8) Emulex 8 Gbps FC HBA 2 (*2) Planar schema 2x single port QDR IB HBA per host p. 7 of 15: "MB (planar)"
8 24x Computing Nodes 4x Storage / UI Nodes 3x 8 GB DDR x 4 GB DDR XEON X5680 XEON X5650 XEON X5680 XEON X5650 NVIDIA Tesla Uplink 1 3x 8 GB DDR Mellanox 10GbE HBA (*2) 3x 4 GB DDR IO-Fusion ioextreme Mellanox QDR IB HBA 1 (*2) Emulex 8 Gbps FC HBA 1 (*2) NVIDIA Tesla Uplink 2 Supermicro SAS RAID Controller (*8) Mellanox QDR IB HBA 2 (*2) Supermicro SAS RAID Controller (*8) Emulex 8 Gbps FC HBA 2 (*2) Custom 2D-torus based schema 2x dual port QDR IB HBA per host p. 8 of 15: "MB (2D-torus)"
9 11.4 kw (70%) 11.5 kw (70%) 11.5 kw (70%) 11.4 kw (70%) 4x APC 20 kva (N+1) 4x 16A 16x PDU 16A 4x 16A 0.4 kw 48 kw heat emission by the load 7 kw heat emission by UPS system (eff. 85%) 55 kw heat emission in total 28 power link paths available for 38 dual PSU devices 2N 0.7 kw each Cisco RPS 2x 10A (2N) 2x Main Ethernet switch (48 GbE + 2x 10GbE ports) 10A 0.6 kw 0.2 kw each 10A 0.1 kw each 0.5 kw each 0.5 kw each 2x 16A (2N) 10.8 kw 10.8 kw 8x APC 5 kva ATS (N) 3x 10A N N N N N N N N 0.8 kw 2.7 kw each 10A 10A 10A Aux 100 Mbps Ethernet switch APC Env. Monitoring Unit Aux 100 Mbps Ethernet switch 0.3 kw p. 9 of 15: "PDU"
10 2.9 kw 2.9 kw 11.5 kw 11.5 kw 2.8 kw 2.8 kw 3.0 kw 2.8 kw 2.9 kw 2.8 kw 2.8 kw 2.9 kw 2.9 kw 3.0 kw 2.8 kw 2.8 kw 11.4 kw 11.4 kw 2.8 kw 2.8 kw p. 10 of 15: "PDU (N+1)"
11 2.9 kw One of the UPSes goes down 2.8 kw 3.0 kw 2.8 kw 2.9 kw 2.8 kw 2.8 kw 2.9 kw 2.9 kw 3.0 kw +36% 15.7 kw (98%) 2.8 kw 2.8 kw 15.2 kw (95%) 15.2 kw (95%) +32% +32% 2.8 kw 2.8 kw p. 11 of 15: "PDU (N)"
12 4x 10G uplinks 12 TB (SAS) 50 TB (SATA) Planar schema 2x single port QDR IB HBA per host 2x 8G FC 2x 8G FC Storage / UI Servers 4x 40G 8x 1G + 4x 10G No free ports 8x 40G 32G 36 ports free 2G 48x 40G 48x 1G 16 ports free Hw.Ctrl. Switches (Ethernet)... 2x PCIe 2.0 (x16) TYAN S x PCIe 2.0 (x16) NVIDIA S G QDR IB links topology 560 G 320 G 12 subsystems 12 subsystems 560 G 560 G p. 12 of 15: "Network (planar)"
13 4x 10G uplinks 12 TB (SAS) 50 TB (SATA) Custom 2D-torus based schema 2x dual port QDR IB HBA per host Storage / UI Servers 2x 8G FC 2x 8G FC 4x6 (optimal) layout 32G 36 ports free 8x 1G + 4x 10G 2G Hw.Ctrl. Switches (Ethernet) 48x 1G 16 ports free 48 links for 24 hosts (4 QDR QSFP ports per host) 3x8 (alternative) layout 48 links for 24 hosts (4 QDR QSFP ports per host) p. 13 of 15: "Network (2D-torus)"
14 Rear view: QDR IB cable routes 1m (x48) copper QSFP cables are used Custom 2D-torus schema QDR IB (copper) cabling layout 4x6 (optimal) torus layout QDR IB cables localization 600 mm Custom routing solution must be implemented in order to operate the fabric p. 14 of 15: "IB cabling (2D-torus: 4x6)"
15 Rear view: QDR IB cable routes 0.5m (x19), 1m (x19), 2m (x7), 3m (x3) copper QSFP cables are used Custom 2D-torus schema QDR IB (copper) cabling layout 3x8 (alternative) torus layout QDR IB cables localization 600 mm Custom routing solution must be implemented in order to operate the fabric p. 15 of 15: "IB cabling (2D-torus: 3x8)"
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