Markov Random Fields
|
|
- Jared Lloyd
- 5 years ago
- Views:
Transcription
1 3750 Machine earning ecture 4 Markov Random ields Milos auskrecht milos@cs.pitt.edu 5329 ennott quare 3750 dvanced Machine earning Markov random fields Probabilistic models with symmetric dependences. Typically models spatially varying quantities - potential function (defined over factors) - f is strictly positive we can rewrite the definition as: - nergy function - ibbs (oltzman) distribution - partition function 3750 dvanced Machine earning 1
2 raphical representation of MRs n undirected network (also called independence graph) = (, ) =1, 2,.. N correspond to random variables xample: or x i and x j appear within the same factor c variables,.. ssume the full joint of MR 3750 dvanced Machine earning Markov random fields regular lattice (sing model) rbitrary graph 3750 dvanced Machine earning 2
3 Markov random fields regular lattice (sing model) rbitrary graph 3750 dvanced Machine earning Markov random fields Pairwise Markov property Two nodes in the network that are not directly connected can be made independent given all other nodes 3750 dvanced Machine earning 3
4 Markov random fields Pairwise Markov property Two nodes in the network that are not directly connected can be made independent given all other nodes ocal Markov property set of nodes (variables) can be made independent from the rest of nodes variables given its immediate neighbors lobal Markov property vertex set is independent of the vertex set ( and are disjoint) given set if all chains in between elements in and intersect 3750 dvanced Machine earning Types of Markov random fields MRs with discrete random variables lique potentials can be defined by mapping all cliquevariable instances to R xample: ssume two binary variables, with values {a1,a2,a3} and {b1,b2} are in the same clique c. Then: a1 b1 0.5 a1 b2 0.2 a2 b1 0.1 a2 b2 0.3 a3 b1 0.2 a3 b dvanced Machine earning 4
5 Types of Markov random fields aussian Markov Random ield Precision matrix Variables in x are connected in the network only if they have a nonzero entry in the precision matrix ll zero entries are not directly connected Why? 3750 dvanced Machine earning MR variable elimination inference xample: liminate 3750 dvanced Machine earning 5
6 actors actor: is a function that maps value assignments for a subset of random variables to R (reals) The scope of the factor: a set of variables defining the factor xample: ssume discrete random variables x (with values a1,a2, a3) and y (with values b1 and b2) actor: a1 b1 0.5 a1 b2 0.2 cope of the factor: a2 b1 0.1 a2 b2 0.3 a3 b1 0.2 a3 b dvanced Machine earning Variables:,, actor Product a1 b1 c1 0.5*0.1 a1 b1 c2 0.5*0.6 b1 c1 0.1 b1 c2 0.6 b2 c1 0.3 b2 c2 0.4 a1 b1 0.5 a1 b2 0.2 a2 b1 0.1 a2 b2 0.3 a3 b1 0.2 a3 b2 0.4 a1 b2 c1 0.2*0.3 a1 b2 c2 0.2*0.4 a2 b1 c1 0.1*0.1 a2 b1 c2 0.1*0.6 a2 b2 c1 0.3*0.3 a2 b2 c2 0.3*0.4 a3 b1 c1 0.2*0.1 a3 b1 c2 0.2*0.6 a3 b2 c1 0.4*0.3 a3 b2 c2 0.4* dvanced Machine earning 6
7 Variables:,, actor Marginalization a1 b1 c1 0.2 a1 b1 c a1 b2 c1 0.4 a1 b2 c a2 b1 c1 0.5 a2 b1 c2 0.1 a2 b2 c1 0.3 a2 b2 c2 0.2 a3 b1 c a1 c =0.6 a1 c =0.5 a2 c1 0.8 a2 c2 0.3 a3 c1 0.4 a3 c2 0.7 a3 b1 c a3 b2 c a3 b2 c dvanced Machine earning MR variable elimination inference xample (cont): liminate 3750 dvanced Machine earning 7
8 dvanced Machine earning MR variable elimination inference xample (cont): liminate 3750 dvanced Machine earning MR variable elimination inference xample (cont): liminate
9 dvanced Machine earning MR variable elimination inference xample (cont): liminate 3750 dvanced Machine earning MR variable elimination inference xample (cont): liminate
10 MR variable elimination inference xample (cont): liminate 3750 dvanced Machine earning nduced graph graph induced by a specific variable elimination order: a graph extended by links that represent intermediate factors dvanced Machine earning 10
11 Tree decomposition of the graph tree decomposition of a graph : tree T with a vertex set associated to every node. or all edges {v,w} : there is a set containing both v and w in T. or every v : the nodes in T that contain v form a connected subtree dvanced Machine earning Tree decomposition of the graph tree decomposition of a graph : tree T with a vertex set associated to every node. or all edges {v,w} : there is a set containing both v and w in T. or every v : the nodes in T that contain v form a connected subtree. liques in the graph 3750 dvanced Machine earning 11
12 Tree decomposition of the graph tree decomposition of a graph : tree T with a vertex set associated to every node. or all edges {v,w} : there is a set containing both v and w in T. or every v : the nodes in T that contain v form a connected subtree dvanced Machine earning Tree decomposition of the graph nother tree decomposition of a graph : tree T with a vertex set associated to every node. or all edges {v,w} : there is a set containing both v and w in T. or every v : the nodes in T that contain v form a connected subtree dvanced Machine earning 12
13 Tree decomposition of the graph nother tree decomposition of a graph : tree T with a vertex set associated to every node. or all edges {v,w} : there is a set containing both v and w in T. or every v : the nodes in T that contain v form a connected subtree dvanced Machine earning Treewidth of the graph Width of the tree decomposition: Treewidth of a graph : tw()= minimum width over all tree decompositions of dvanced Machine earning 13
14 Treewidth of the graph Treewidth of a graph : tw()= minimum width over all tree decompositions of Why is it important? The calculations can take advantage of the structure and be performed more efficiently treewidth gives the best case complexity vs 3750 dvanced Machine earning Trees Why do we like trees? nference in trees structures can be done in time linear in the number of nodes in the tree 3750 dvanced Machine earning 14
15 onverting Ns to MRs Moral-graph []: of a bayesian network over X is an undirected graph over X that contains an edge between x and y if: There exists a directed edge between them in. They are both parents of the same node in dvanced Machine earning Moral raphs Why moralization? 3750 dvanced Machine earning 15
16 hordal graphs hordal raph: an undirected graph whose minimum cycle contains 3 verticies. hordal. Not hordal dvanced Machine earning hordal raphs Properties: There exists an elimination ordering that adds no edges. The minimal induced treewidth of the graph is equal to the size of the largest clique dvanced Machine earning 16
17 Triangulation The process of converting a graph into a chordal graph is called Triangulation. new graph obtained via triangulation is: 1) uaranteed to be chordal. 2) Not guaranteed to be (treewidth) optimal. There exist exact algorithms for minimal chordal graphs, and heuristic methods with a guaranteed upper bound dvanced Machine earning hordal raphs iven a minimum triangulation for a graph, we can carry out the variable-elimination algorithm in the minimum possible time. omplexity of the optimal triangulation: inding the minimal triangulation is NP-ard. The inference limit: nference time is exponential in terms of the largest clique (factor) in dvanced Machine earning 17
18 nference: conclusions We cannot escape exponential costs in the treewidth. ut in many graphs the treewidth is much smaller than the total number of variables till a problem: inding the optimal decomposition is hard ut, paying the cost up front may be worth it. Triangulate once, query many times. Real cost savings if not a bounded one dvanced Machine earning 18
Probabilistic Graphical Models
Probabilistic Graphical Models Raquel Urtasun and Tamir Hazan TTI Chicago April 22, 2011 Raquel Urtasun and Tamir Hazan (TTI-C) Graphical Models April 22, 2011 1 / 22 If the graph is non-chordal, then
More informationSTAT 598L Probabilistic Graphical Models. Instructor: Sergey Kirshner. Exact Inference
STAT 598L Probabilistic Graphical Models Instructor: Sergey Kirshner Exact Inference What To Do With Bayesian/Markov Network? Compact representation of a complex model, but Goal: efficient extraction of
More informationMachine Learning Lecture 16
ourse Outline Machine Learning Lecture 16 undamentals (2 weeks) ayes ecision Theory Probability ensity stimation Undirected raphical Models & Inference 28.06.2016 iscriminative pproaches (5 weeks) Linear
More informationLecture 5: Exact inference. Queries. Complexity of inference. Queries (continued) Bayesian networks can answer questions about the underlying
given that Maximum a posteriori (MAP query: given evidence 2 which has the highest probability: instantiation of all other variables in the network,, Most probable evidence (MPE: given evidence, find an
More informationCS242: Probabilistic Graphical Models Lecture 3: Factor Graphs & Variable Elimination
CS242: Probabilistic Graphical Models Lecture 3: Factor Graphs & Variable Elimination Instructor: Erik Sudderth Brown University Computer Science September 11, 2014 Some figures and materials courtesy
More informationLecture 5: Exact inference
Lecture 5: Exact inference Queries Inference in chains Variable elimination Without evidence With evidence Complexity of variable elimination which has the highest probability: instantiation of all other
More informationALGORITHMS FOR DECISION SUPPORT
GORIHM FOR IION UOR ayesian networks Guest ecturer: ilja Renooij hanks to hor Whalen or kindly contributing to these slides robabilistic Independence onditional Independence onditional Independence hain
More informationProbabilistic Graphical Models
Probabilistic Graphical Models Raquel Urtasun and Tamir Hazan TTI Chicago April 8, 2011 Raquel Urtasun and Tamir Hazan (TTI-C) Graphical Models April 8, 2011 1 / 19 Factor Graphs H does not reveal the
More informationThese notes present some properties of chordal graphs, a set of undirected graphs that are important for undirected graphical models.
Undirected Graphical Models: Chordal Graphs, Decomposable Graphs, Junction Trees, and Factorizations Peter Bartlett. October 2003. These notes present some properties of chordal graphs, a set of undirected
More informationAn Effective Upperbound on Treewidth Using Partial Fill-in of Separators
An Effective Upperbound on Treewidth Using Partial Fill-in of Separators Boi Faltings Martin Charles Golumbic June 28, 2009 Abstract Partitioning a graph using graph separators, and particularly clique
More informationCh9: Exact Inference: Variable Elimination. Shimi Salant, Barak Sternberg
Ch9: Exact Inference: Variable Elimination Shimi Salant Barak Sternberg Part 1 Reminder introduction (1/3) We saw two ways to represent (finite discrete) distributions via graphical data structures: Bayesian
More informationBayesian Networks and Decision Graphs
ayesian Networks and ecision raphs hapter 7 hapter 7 p. 1/27 Learning the structure of a ayesian network We have: complete database of cases over a set of variables. We want: ayesian network structure
More information6 : Factor Graphs, Message Passing and Junction Trees
10-708: Probabilistic Graphical Models 10-708, Spring 2018 6 : Factor Graphs, Message Passing and Junction Trees Lecturer: Kayhan Batmanghelich Scribes: Sarthak Garg 1 Factor Graphs Factor Graphs are graphical
More informationLecture 4: Undirected Graphical Models
Lecture 4: Undirected Graphical Models Department of Biostatistics University of Michigan zhenkewu@umich.edu http://zhenkewu.com/teaching/graphical_model 15 September, 2016 Zhenke Wu BIOSTAT830 Graphical
More informationCS242: Probabilistic Graphical Models Lecture 2B: Loopy Belief Propagation & Junction Trees
CS242: Probabilistic Graphical Models Lecture 2B: Loopy Belief Propagation & Junction Trees Professor Erik Sudderth Brown University Computer Science September 22, 2016 Some figures and materials courtesy
More informationJunction tree propagation - BNDG 4-4.6
Junction tree propagation - BNDG 4-4. Finn V. Jensen and Thomas D. Nielsen Junction tree propagation p. 1/2 Exact Inference Message Passing in Join Trees More sophisticated inference technique; used in
More informationBayesian Networks Inference
Bayesian Networks Inference Machine Learning 10701/15781 Carlos Guestrin Carnegie Mellon University November 5 th, 2007 2005-2007 Carlos Guestrin 1 General probabilistic inference Flu Allergy Query: Sinus
More informationMassachusetts Institute of Technology Department of Electrical Engineering and Computer Science Algorithms For Inference Fall 2014
Suggested Reading: Massachusetts Institute of Technology Department of Electrical Engineering and Computer Science 6.438 Algorithms For Inference Fall 2014 Probabilistic Modelling and Reasoning: The Junction
More informationPart II. C. M. Bishop PATTERN RECOGNITION AND MACHINE LEARNING CHAPTER 8: GRAPHICAL MODELS
Part II C. M. Bishop PATTERN RECOGNITION AND MACHINE LEARNING CHAPTER 8: GRAPHICAL MODELS Converting Directed to Undirected Graphs (1) Converting Directed to Undirected Graphs (2) Add extra links between
More informationChapter 8 of Bishop's Book: Graphical Models
Chapter 8 of Bishop's Book: Graphical Models Review of Probability Probability density over possible values of x Used to find probability of x falling in some range For continuous variables, the probability
More informationLearning decomposable models with a bounded clique size
Learning decomposable models with a bounded clique size Achievements 2014-2016 Aritz Pérez Basque Center for Applied Mathematics Bilbao, March, 2016 Outline 1 Motivation and background 2 The problem 3
More informationLecture 9: Undirected Graphical Models Machine Learning
Lecture 9: Undirected Graphical Models Machine Learning Andrew Rosenberg March 5, 2010 1/1 Today Graphical Models Probabilities in Undirected Graphs 2/1 Undirected Graphs What if we allow undirected graphs?
More informationLearning Bounded Treewidth Bayesian Networks
Journal of Machine Learning Research 9 (2008) 2287-2319 Submitted 5/08; Published 10/08 Learning Bounded Treewidth Bayesian Networks Gal Elidan Department of Statistics Hebrew University Jerusalem, 91905,
More informationComputer Vision Group Prof. Daniel Cremers. 4. Probabilistic Graphical Models Directed Models
Prof. Daniel Cremers 4. Probabilistic Graphical Models Directed Models The Bayes Filter (Rep.) (Bayes) (Markov) (Tot. prob.) (Markov) (Markov) 2 Graphical Representation (Rep.) We can describe the overall
More informationProbabilistic Graphical Models
Probabilistic Graphical Models Lecture 8 Junction Trees CS/CNS/EE 155 Andreas Krause Announcements Homework 2 due next Wednesday (Nov 4) in class Start early!!! Project milestones due Monday (Nov 9) 4
More informationECE 6504: Advanced Topics in Machine Learning Probabilistic Graphical Models and Large-Scale Learning
ECE 6504: Advanced Topics in Machine Learning Probabilistic Graphical Models and Large-Scale Learning Topics Bayes Nets: Inference (Finish) Variable Elimination Graph-view of VE: Fill-edges, induced width
More informationComputer Vision Group Prof. Daniel Cremers. 4. Probabilistic Graphical Models Directed Models
Prof. Daniel Cremers 4. Probabilistic Graphical Models Directed Models The Bayes Filter (Rep.) (Bayes) (Markov) (Tot. prob.) (Markov) (Markov) 2 Graphical Representation (Rep.) We can describe the overall
More informationTreewidth: Preprocessing and Kernelization
Treewidth: Preprocessing and Kernelization Hans L. Bodlaender Joint work with Arie Koster, Frank van den Eijkhof, Bart Jansen, Stefan Kratsch, Vincent Kreuzen 1 This talk Survey of work on preprocessing
More informationComputer Vision Group Prof. Daniel Cremers. 4a. Inference in Graphical Models
Group Prof. Daniel Cremers 4a. Inference in Graphical Models Inference on a Chain (Rep.) The first values of µ α and µ β are: The partition function can be computed at any node: Overall, we have O(NK 2
More informationSearch Algorithms for Solving Queries on Graphical Models & the Importance of Pseudo-trees in their Complexity.
Search Algorithms for Solving Queries on Graphical Models & the Importance of Pseudo-trees in their Complexity. University of California, Irvine CS199: Individual Study with Rina Dechter Héctor Otero Mediero
More informationBelief propagation in a bucket-tree. Handouts, 275B Fall Rina Dechter. November 1, 2000
Belief propagation in a bucket-tree Handouts, 275B Fall-2000 Rina Dechter November 1, 2000 1 From bucket-elimination to tree-propagation The bucket-elimination algorithm, elim-bel, for belief updating
More informationSTA 4273H: Statistical Machine Learning
STA 4273H: Statistical Machine Learning Russ Salakhutdinov Department of Statistics! rsalakhu@utstat.toronto.edu! http://www.utstat.utoronto.ca/~rsalakhu/ Sidney Smith Hall, Room 6002 Lecture 5 Inference
More informationEE512 Graphical Models Fall 2009
EE512 Graphical Models Fall 2009 Prof. Jeff Bilmes University of Washington, Seattle Department of Electrical Engineering Fall Quarter, 2009 http://ssli.ee.washington.edu/~bilmes/ee512fa09 Lecture 11 -
More information2. Graphical Models. Undirected graphical models. Factor graphs. Bayesian networks. Conversion between graphical models. Graphical Models 2-1
Graphical Models 2-1 2. Graphical Models Undirected graphical models Factor graphs Bayesian networks Conversion between graphical models Graphical Models 2-2 Graphical models There are three families of
More informationMachine Learning. Sourangshu Bhattacharya
Machine Learning Sourangshu Bhattacharya Bayesian Networks Directed Acyclic Graph (DAG) Bayesian Networks General Factorization Curve Fitting Re-visited Maximum Likelihood Determine by minimizing sum-of-squares
More informationPart I: Sum Product Algorithm and (Loopy) Belief Propagation. What s wrong with VarElim. Forwards algorithm (filtering) Forwards-backwards algorithm
OU 56 Probabilistic Graphical Models Loopy Belief Propagation and lique Trees / Join Trees lides from Kevin Murphy s Graphical Model Tutorial (with minor changes) eading: Koller and Friedman h 0 Part I:
More informationPATTERN RECOGNITION AND MACHINE LEARNING CHAPTER 8: GRAPHICAL MODELS
PATTERN RECOGNITION AND MACHINE LEARNING CHAPTER 8: GRAPHICAL MODELS Bayesian Networks Directed Acyclic Graph (DAG) Bayesian Networks General Factorization Bayesian Curve Fitting (1) Polynomial Bayesian
More informationProbabilistic Graphical Models
Probabilistic Graphical Models Raquel Urtasun and Tamir Hazan TTI Chicago April 25, 2011 Raquel Urtasun and Tamir Hazan (TTI-C) Graphical Models April 25, 2011 1 / 17 Clique Trees Today we are going to
More informationOur Graphs Become Larger
Our Graphs Become Larger Simple algorithms do not scale O(n k ) for size k graphlets Two approaches: Find clever algorithms for counting small graphlets Approximate count for larger graphlets Graph Induced
More informationFinding Non-overlapping Clusters for Generalized Inference Over Graphical Models
1 Finding Non-overlapping Clusters for Generalized Inference Over Graphical Models Divyanshu Vats and José M. F. Moura arxiv:1107.4067v2 [stat.ml] 18 Mar 2012 Abstract Graphical models use graphs to compactly
More informationTreewidth and graph minors
Treewidth and graph minors Lectures 9 and 10, December 29, 2011, January 5, 2012 We shall touch upon the theory of Graph Minors by Robertson and Seymour. This theory gives a very general condition under
More informationTreewidth. Kai Wang, Zheng Lu, and John Hicks. April 1 st, 2015
Treewidth Kai Wang, Zheng Lu, and John Hicks April 1 st, 2015 Outline Introduction Definitions Examples History Algorithms and Implementations Theorems Pseudocode Heuristics Implementations Results Regression
More informationIntroduction to Triangulated Graphs. Tandy Warnow
Introduction to Triangulated Graphs Tandy Warnow Topics for today Triangulated graphs: theorems and algorithms (Chapters 11.3 and 11.9) Examples of triangulated graphs in phylogeny estimation (Chapters
More informationLoopy Belief Propagation
Loopy Belief Propagation Research Exam Kristin Branson September 29, 2003 Loopy Belief Propagation p.1/73 Problem Formalization Reasoning about any real-world problem requires assumptions about the structure
More information3 : Representation of Undirected GMs
0-708: Probabilistic Graphical Models 0-708, Spring 202 3 : Representation of Undirected GMs Lecturer: Eric P. Xing Scribes: Nicole Rafidi, Kirstin Early Last Time In the last lecture, we discussed directed
More informationFMA901F: Machine Learning Lecture 6: Graphical Models. Cristian Sminchisescu
FMA901F: Machine Learning Lecture 6: Graphical Models Cristian Sminchisescu Graphical Models Provide a simple way to visualize the structure of a probabilistic model and can be used to design and motivate
More informationECE 6504: Advanced Topics in Machine Learning Probabilistic Graphical Models and Large-Scale Learning
ECE 6504: Advanced Topics in Machine Learning Probabilistic Graphical Models and Large-Scale Learning Topics Markov Random Fields: Inference Exact: VE Exact+Approximate: BP Readings: Barber 5 Dhruv Batra
More informationRecitation 4: Elimination algorithm, reconstituted graph, triangulation
Massachusetts Institute of Technology Department of Electrical Engineering and Computer Science 6.438 Algorithms For Inference Fall 2014 Recitation 4: Elimination algorithm, reconstituted graph, triangulation
More informationSemi-Independent Partitioning: A Method for Bounding the Solution to COP s
Semi-Independent Partitioning: A Method for Bounding the Solution to COP s David Larkin University of California, Irvine Abstract. In this paper we introduce a new method for bounding the solution to constraint
More informationNecessary edges in k-chordalizations of graphs
Necessary edges in k-chordalizations of graphs Hans L. Bodlaender Abstract In this note, we look at which edges must always be added to a given graph G = (V, E), when we want to make it a chordal graph
More informationCOS 513: Foundations of Probabilistic Modeling. Lecture 5
COS 513: Foundations of Probabilistic Modeling Young-suk Lee 1 Administrative Midterm report is due Oct. 29 th. Recitation is at 4:26pm in Friend 108. Lecture 5 R is a computer language for statistical
More informationD-Separation. b) the arrows meet head-to-head at the node, and neither the node, nor any of its descendants, are in the set C.
D-Separation Say: A, B, and C are non-intersecting subsets of nodes in a directed graph. A path from A to B is blocked by C if it contains a node such that either a) the arrows on the path meet either
More informationCS 441 Discrete Mathematics for CS Lecture 26. Graphs. CS 441 Discrete mathematics for CS. Final exam
CS 441 Discrete Mathematics for CS Lecture 26 Graphs Milos Hauskrecht milos@cs.pitt.edu 5329 Sennott Square Final exam Saturday, April 26, 2014 at 10:00-11:50am The same classroom as lectures The exam
More informationGraphical Models. Pradeep Ravikumar Department of Computer Science The University of Texas at Austin
Graphical Models Pradeep Ravikumar Department of Computer Science The University of Texas at Austin Useful References Graphical models, exponential families, and variational inference. M. J. Wainwright
More information2. Graphical Models. Undirected pairwise graphical models. Factor graphs. Bayesian networks. Conversion between graphical models. Graphical Models 2-1
Graphical Models 2-1 2. Graphical Models Undirected pairwise graphical models Factor graphs Bayesian networks Conversion between graphical models Graphical Models 2-2 Graphical models Families of graphical
More informationWeighted Treewidth: Algorithmic Techniques and Results
Weighted Treewidth: Algorithmic Techniques and Results Emgad Bachoore Hans L. Bodlaender Department of Information and Computing Sciences, Utrecht University Technical Report UU-CS-2006-013 www.cs.uu.nl
More informationGraphs and Discrete Structures
Graphs and Discrete Structures Nicolas Bousquet Louis Esperet Fall 2018 Abstract Brief summary of the first and second course. É 1 Chromatic number, independence number and clique number The chromatic
More informationProbabilistic Graphical Models
Overview of Part One Probabilistic Graphical Models Part One: Graphs and Markov Properties Christopher M. Bishop Graphs and probabilities Directed graphs Markov properties Undirected graphs Examples Microsoft
More informationJunction Trees and Chordal Graphs
Graphical Models, Lecture 6, Michaelmas Term 2011 October 24, 2011 Decomposability Factorization of Markov distributions Explicit formula for MLE Consider an undirected graph G = (V, E). A partitioning
More informationColouring graphs with no odd holes
Colouring graphs with no odd holes Paul Seymour (Princeton) joint with Alex Scott (Oxford) 1 / 17 Chromatic number χ(g): minimum number of colours needed to colour G. 2 / 17 Chromatic number χ(g): minimum
More informationExact Algorithms Lecture 7: FPT Hardness and the ETH
Exact Algorithms Lecture 7: FPT Hardness and the ETH February 12, 2016 Lecturer: Michael Lampis 1 Reminder: FPT algorithms Definition 1. A parameterized problem is a function from (χ, k) {0, 1} N to {0,
More informationExact Inference: Elimination and Sum Product (and hidden Markov models)
Exact Inference: Elimination and Sum Product (and hidden Markov models) David M. Blei Columbia University October 13, 2015 The first sections of these lecture notes follow the ideas in Chapters 3 and 4
More informationMinimal Dominating Sets in Graphs: Enumeration, Combinatorial Bounds and Graph Classes
Minimal Dominating Sets in Graphs: Enumeration, Combinatorial Bounds and Graph Classes J.-F. Couturier 1 P. Heggernes 2 D. Kratsch 1 P. van t Hof 2 1 LITA Université de Lorraine F-57045 Metz France 2 University
More informationHonour Thy Neighbour Clique Maintenance in Dynamic Graphs
Honour Thy Neighbour Clique Maintenance in Dynamic Graphs Thorsten J. Ottosen Department of Computer Science, Aalborg University, Denmark nesotto@cs.aau.dk Jiří Vomlel Institute of Information Theory and
More informationOn 2-Subcolourings of Chordal Graphs
On 2-Subcolourings of Chordal Graphs Juraj Stacho School of Computing Science, Simon Fraser University 8888 University Drive, Burnaby, B.C., Canada V5A 1S6 jstacho@cs.sfu.ca Abstract. A 2-subcolouring
More informationExact algorithm for the Maximum Induced Planar Subgraph Problem
Exact algorithm for the Maximum Induced Planar Subgraph Problem Fedor Fomin Ioan Todinca Yngve Villanger University of Bergen, Université d Orléans Workshop on Graph Decompositions, CIRM, October 19th,
More informationAND/OR Cutset Conditioning
ND/OR utset onditioning Robert Mateescu and Rina Dechter School of Information and omputer Science University of alifornia, Irvine, 92697 {mateescu, dechter}@ics.uci.edu bstract utset conditioning is one
More informationVariational Methods for Graphical Models
Chapter 2 Variational Methods for Graphical Models 2.1 Introduction The problem of probabb1istic inference in graphical models is the problem of computing a conditional probability distribution over the
More information5 Minimal I-Maps, Chordal Graphs, Trees, and Markov Chains
Massachusetts Institute of Technology Department of Electrical Engineering and Computer Science 6.438 Algorithms for Inference Fall 2014 5 Minimal I-Maps, Chordal Graphs, Trees, and Markov Chains Recall
More informationGraph Theory. Probabilistic Graphical Models. L. Enrique Sucar, INAOE. Definitions. Types of Graphs. Trajectories and Circuits.
Theory Probabilistic ical Models L. Enrique Sucar, INAOE and (INAOE) 1 / 32 Outline and 1 2 3 4 5 6 7 8 and 9 (INAOE) 2 / 32 A graph provides a compact way to represent binary relations between a set of
More informationCS 343: Artificial Intelligence
CS 343: Artificial Intelligence Bayes Nets: Inference Prof. Scott Niekum The University of Texas at Austin [These slides based on those of Dan Klein and Pieter Abbeel for CS188 Intro to AI at UC Berkeley.
More informationLecture 3: Conditional Independence - Undirected
CS598: Graphical Models, Fall 2016 Lecture 3: Conditional Independence - Undirected Lecturer: Sanmi Koyejo Scribe: Nate Bowman and Erin Carrier, Aug. 30, 2016 1 Review for the Bayes-Ball Algorithm Recall
More informationExpectation Propagation
Expectation Propagation Erik Sudderth 6.975 Week 11 Presentation November 20, 2002 Introduction Goal: Efficiently approximate intractable distributions Features of Expectation Propagation (EP): Deterministic,
More informationGraphical Models as Block-Tree Graphs
Graphical Models as Block-Tree Graphs 1 Divyanshu Vats and José M. F. Moura arxiv:1007.0563v2 [stat.ml] 13 Nov 2010 Abstract We introduce block-tree graphs as a framework for deriving efficient algorithms
More informationFaster parameterized algorithms for Minimum Fill-In
Faster parameterized algorithms for Minimum Fill-In Hans L. Bodlaender Pinar Heggernes Yngve Villanger Technical Report UU-CS-2008-042 December 2008 Department of Information and Computing Sciences Utrecht
More informationExponential time algorithms for the minimum dominating set problem on some graph classes
Exponential time algorithms for the minimum dominating set problem on some graph classes Serge Gaspers University of Bergen Department of Informatics N-500 Bergen, Norway. gaspers@ii.uib.no Dieter Kratsch
More informationConflict Graphs for Combinatorial Optimization Problems
Conflict Graphs for Combinatorial Optimization Problems Ulrich Pferschy joint work with Andreas Darmann and Joachim Schauer University of Graz, Austria Introduction Combinatorial Optimization Problem CO
More informationFaster parameterized algorithms for Minimum Fill-In
Faster parameterized algorithms for Minimum Fill-In Hans L. Bodlaender Pinar Heggernes Yngve Villanger Abstract We present two parameterized algorithms for the Minimum Fill-In problem, also known as Chordal
More informationInformation Processing Letters
Information Processing Letters 112 (2012) 449 456 Contents lists available at SciVerse ScienceDirect Information Processing Letters www.elsevier.com/locate/ipl Recursive sum product algorithm for generalized
More informationProbabilistic Graphical Models
Overview of Part Two Probabilistic Graphical Models Part Two: Inference and Learning Christopher M. Bishop Exact inference and the junction tree MCMC Variational methods and EM Example General variational
More informationApplied Mathematics Letters. Graph triangulations and the compatibility of unrooted phylogenetic trees
Applied Mathematics Letters 24 (2011) 719 723 Contents lists available at ScienceDirect Applied Mathematics Letters journal homepage: www.elsevier.com/locate/aml Graph triangulations and the compatibility
More informationarxiv: v1 [cs.dm] 21 Dec 2015
The Maximum Cardinality Cut Problem is Polynomial in Proper Interval Graphs Arman Boyacı 1, Tinaz Ekim 1, and Mordechai Shalom 1 Department of Industrial Engineering, Boğaziçi University, Istanbul, Turkey
More informationFEDOR V. FOMIN. Lectures on treewidth. The Parameterized Complexity Summer School 1-3 September 2017 Vienna, Austria
FEDOR V. FOMIN Lectures on treewidth The Parameterized Complexity Summer School 1-3 September 2017 Vienna, Austria Why treewidth? Very general idea in science: large structures can be understood by breaking
More informationLearning the Structure of Sum-Product Networks. Robert Gens Pedro Domingos
Learning the Structure of Sum-Product Networks Robert Gens Pedro Domingos w 20 10x O(n) X Y LL PLL CLL CMLL Motivation SPN Structure Experiments Review Learning Graphical Models Representation Inference
More informationBayesian Networks, Winter Yoav Haimovitch & Ariel Raviv
Bayesian Networks, Winter 2009-2010 Yoav Haimovitch & Ariel Raviv 1 Chordal Graph Warm up Theorem 7 Perfect Vertex Elimination Scheme Maximal cliques Tree Bibliography M.C.Golumbic Algorithmic Graph Theory
More informationHomework 1: Belief Propagation & Factor Graphs
Homework 1: Belief Propagation & Factor Graphs Brown University CS 242: Probabilistic Graphical Models Homework due at 11:59pm on October 5, 2016 We examine the problem of computing marginal distributions
More informationOSU CS 536 Probabilistic Graphical Models. Loopy Belief Propagation and Clique Trees / Join Trees
OSU CS 536 Probabilistic Graphical Models Loopy Belief Propagation and Clique Trees / Join Trees Slides from Kevin Murphy s Graphical Model Tutorial (with minor changes) Reading: Koller and Friedman Ch
More informationMassachusetts Institute of Technology Department of Electrical Engineering and Computer Science Algorithms For Inference Fall 2014
Massachusetts Institute of Technology Department of Electrical Engineering and Computer Science 6.438 Algorithms For Inference Fall 2014 Recitation-6: Hardness of Inference Contents 1 NP-Hardness Part-II
More informationGraph Isomorphism. Algorithms and networks
Graph Isomorphism Algorithms and networks Today Graph isomorphism: definition Complexity: isomorphism completeness The refinement heuristic Isomorphism for trees Rooted trees Unrooted trees Graph Isomorphism
More informationIterative Algorithms for Graphical Models 1
Iterative Algorithms for Graphical Models Robert Mateescu School of Information and Computer Science University of California, Irvine mateescu@ics.uci.edu http://www.ics.uci.edu/ mateescu June 30, 2003
More informationGraphs Representable by Caterpillars. Nancy Eaton
Graphs Representable by Caterpillars Nancy Eaton Definition 1. A caterpillar is a tree in which a single path (the spine) is incident to (or contains) every edge. 1 2 Graphs Representable by Caterpillars
More informationEE512A Advanced Inference in Graphical Models
EE512A Advanced Inference in Graphical Models Fall Quarter, Lecture 6 http://j.ee.washington.edu/~bilmes/classes/ee512a_fall_2014/ Prof. Jeff Bilmes University of Washington, Seattle Department of Electrical
More informationComputing Largest Correcting Codes and Their Estimates Using Optimization on Specially Constructed Graphs p.1/30
Computing Largest Correcting Codes and Their Estimates Using Optimization on Specially Constructed Graphs Sergiy Butenko Department of Industrial Engineering Texas A&M University College Station, TX 77843
More informationModels for grids. Computer vision: models, learning and inference. Multi label Denoising. Binary Denoising. Denoising Goal.
Models for grids Computer vision: models, learning and inference Chapter 9 Graphical Models Consider models where one unknown world state at each pixel in the image takes the form of a grid. Loops in the
More informationModeling and Reasoning with Bayesian Networks. Adnan Darwiche University of California Los Angeles, CA
Modeling and Reasoning with Bayesian Networks Adnan Darwiche University of California Los Angeles, CA darwiche@cs.ucla.edu June 24, 2008 Contents Preface 1 1 Introduction 1 1.1 Automated Reasoning........................
More informationEE512 Graphical Models Fall 2009
EE512 Graphical Models Fall 2009 Prof. Jeff Bilmes University of Washington, Seattle Department of Electrical Engineering Fall Quarter, 2009 http://ssli.ee.washington.edu/~bilmes/ee512fa09 Lecture 13 -
More informationChordal graphs MPRI
Chordal graphs MPRI 2017 2018 Michel Habib habib@irif.fr http://www.irif.fr/~habib Sophie Germain, septembre 2017 Schedule Chordal graphs Representation of chordal graphs LBFS and chordal graphs More structural
More informationChordal deletion is fixed-parameter tractable
Chordal deletion is fixed-parameter tractable Dániel Marx Institut für Informatik, Humboldt-Universität zu Berlin, Unter den Linden 6, 10099 Berlin, Germany. dmarx@informatik.hu-berlin.de Abstract. It
More informationLecture 11: May 1, 2000
/ EE596 Pat. Recog. II: Introduction to Graphical Models Spring 2000 Lecturer: Jeff Bilmes Lecture 11: May 1, 2000 University of Washington Dept. of Electrical Engineering Scribe: David Palmer 11.1 Graph
More information4 Factor graphs and Comparing Graphical Model Types
Massachusetts Institute of Technology Department of Electrical Engineering and Computer Science 6.438 Algorithms for Inference Fall 2014 4 Factor graphs and Comparing Graphical Model Types We now introduce
More information