Monte Carlo Methods and Applications

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de Gruyter Proceedings in Mathematics Monte Carlo Methods and Applications Proceedings of the 8th IMACS Seminar on Monte Carlo Methods, August 29 September 2, 2011, Borovets, Bulgaria Bearbeitet von Enrique Alba, Donka Angelova, Maria Angelova, Sergey Artemchuk, Emanouil Atanassov, Krassimir Atanassov, Lilija Atanassova, Vassia Atanassova, Fabian Bastin, Oskar Baumgartner, Aleksandr Burmistrov, Avishy Carmi, Panagiotis Chountas, Carlos Cotta, Dimitar Dimitrov, Ivan Dimov, Nina Dobrinkova, Rami El Haddad, Rana Fakhreddine, Antonio J. Fernández-Leiva, Stefka Fidanova, Lado Filipovic, Amadou Gning, Oleg Iliev, Sofiya Ivanovska, Dimitri Kanevsky, Mariya Korotchenko, Hans Kosina, Christian Lécot, Jan Mandel, Pencho Marinov, Mikhail Mayorov, Ilya N. Medvedev, Lyudmila Mihaylova, Tigran Nagapetyan, Mihail Nedjalkov, Florian Pausinger, Tania Pencheva, Nikolay Petrov, Ivan Popchev, Klaus Ritter, David Rodríguez Rueda, Olympia Roeva, Wolfgang Ch. Schmid, Philipp Schwaha, Siegfried Selberherr, Zlatan Stanojevic, Hidemaro Suwa, Synge Todo, Mario Ullrich, Paula A. Whitlock, Karl K. Sabelfeld 1. Auflage 2013. Buch. XIII, 246 S. Hardcover ISBN 978 3 11 029347 0 Format (B x L): 17 x 24 cm Gewicht: 558 g Weitere Fachgebiete > Technik > Technik Allgemein > Modellierung & Simulation schnell und portofrei erhältlich bei Die Online-Fachbuchhandlung beck-shop.de ist spezialisiert auf Fachbücher, insbesondere Recht, Steuern und Wirtschaft. Im Sortiment finden Sie alle Medien (Bücher, Zeitschriften, CDs, ebooks, etc.) aller Verlage. Ergänzt wird das Programm durch Services wie Neuerscheinungsdienst oder Zusammenstellungen von Büchern zu Sonderpreisen. Der Shop führt mehr als 8 Millionen Produkte.

Contents Preface v 1 Maria Angelova and Tania Pencheva Improvement of Multi-population Genetic Algorithms Convergence Time 1 1.1 Introduction..... 1 1.2 Short Overview of MpGA Modifications... 2 1.3 Parameter Identification of S. cerevisiae Fed-Batch Cultivation Using Different Kinds of MpGA... 4 1.4 Analysis and Conclusions... 7 2 Sergey Artemchuk and Paula A. Whitlock Parallelization and Optimization of 4D Binary Mixture Monte Carlo Simulations Using Open MPI and CUDA 11 2.1 Introduction..... 11 2.2 The Metropolis Monte Carlo Method...... 12 2.3 Decomposition into Subdomains and the Virtual Topology Using OpenMPI... 13 2.4 Management of Hypersphere Coordinate Migration Between Domains 14 2.4.1 Communication between the CPU and the GPU... 15 2.5 Pseudorandom Number Generation.... 15 2.6 Results of Running the Modified Code..... 15 2.7 Conclusions..... 18 3 Emanouil Atanassov, Dimitar Dimitrov, and Sofiya Ivanovska Efficient Implementation of the Heston Model Using GPGPU 21 3.1 Introduction..... 21 3.2 Our GPGPU-Based Algorithm for Option Pricing.... 23 3.3 Numerical Results.... 25 3.4 Conclusions and Future Work.... 27

viii Contents 4 Lilija Atanassova and Krassimir Atanassov On a Game-Method for Modeling with Intuitionistic Fuzzy Estimations. Part 2 29 4.1 Introduction... 29 4.2 Short Remarks on the Game-Method for Modeling from Crisp Point of View... 29 4.3 On the Game-Method for Modeling with Intuitionistic Fuzzy Estimations... 31 4.4 Main Results... 34 4.5 Conclusion... 36 5 Vassia Atanassova, Stefka Fidanova, Ivan Popchev, and Panagiotis Chountas Generalized Nets, ACO Algorithms, and Genetic Algorithms 39 5.1 Introduction... 39 5.2 ACOandGA... 40 5.3 GN for Hybrid ACO-GA Algorithm..... 42 5.4 Conclusion... 44 6 Fabian Bastin Bias Evaluation and Reduction for Sample-Path Optimization 47 6.1 Introduction... 47 6.2 Problem Formulation..... 49 6.3 Taylor-Based Bias Correction...... 51 6.4 Impact on the Optimization Bias.... 52 6.5 NumericalExperiments... 53 6.6 Conclusions... 55 7 Oskar Baumgartner, Zlatan Stanojević, and Hans Kosina Monte Carlo Simulation of Electron Transport in Quantum Cascade Lasers 59 7.1 Introduction... 59 7.2 QCLTransportModel... 59 7.2.1 Pauli Master Equation...... 60 7.2.2 Calculation of Basis States...... 61 7.2.3 Monte Carlo Solver.... 62 7.3 Results and Discussion... 64 7.4 Conclusion... 65

Contents ix 8 Avishy Carmi and Lyudmila Mihaylova Markov Chain Monte Carlo Particle Algorithms for Discrete-Time Nonlinear Filtering 69 8.1 Introduction..... 69 8.2 General Particle Filtering Framework...... 70 8.3 High Dimensional Particle Schemes... 71 8.3.1 Sequential MCMC Filtering... 71 8.3.2 Efficient Sampling in High Dimensions...... 72 8.3.3 Setting Proposal and Steering Distributions... 73 8.4 Illustrative Examples...... 73 8.5 Conclusions..... 76 9 Nina Dobrinkova, Stefka Fidanova, Krassimir Atanassov, and Jan Mandel Game-Method for Modeling and WRF-Fire Model Working Together 79 9.1 Introduction..... 79 9.2 Description of the Game-Method for Modeling...... 80 9.3 General Description of the Coupled Atmosphere Fire Modeling and WRF-Fire... 81 9.4 Wind Simulation Approach...... 83 9.5 Conclusion... 84 10 Stefka Fidanova, Pencho Marinov, and Enrique Alba Wireless Sensor Network Layout 87 10.1 Introduction..... 87 10.2 Wireless Sensor Network Layout Problem...... 88 10.3 ACO for WSN Layout Problem...... 90 10.4 Experimental Results...... 92 10.5Conclusion... 93 11 Lado Filipovic and Siegfried Selberherr A Two-Dimensional Lorentzian Distribution for an Atomic Force Microscopy Simulator 97 11.1 Introduction..... 97 11.2 Modeling Oxidation Kinetics.... 98 11.3 Development of the Lorentzian Model..... 100 11.3.1 Algorithm for the Gaussian Model...... 100 11.3.2 Development of the Lorentzian Model... 101 11.4Conclusion... 103

x Contents 12 Rami El Haddad, Rana Fakhreddine, and Christian Lécot Stratified Monte Carlo Integration 105 12.1 Introduction... 105 12.2 Numerical Integration.... 106 12.3Conclusion... 112 13 Oleg Iliev, Tigran Nagapetyan, and Klaus Ritter Monte Carlo Simulation of Asymmetric Flow Field Flow Fractionation 115 13.1 Motivation.... 115 13.2 AFFFF... 116 13.3 Mathematical Model and Numerical Algorithm.... 117 13.3.1 MathematicalModel... 117 13.3.2 The MLMC Algorithm..... 118 13.4 Numerical Results... 119 14 Dimitri Kanevsky and Avishy Carmi Convexization in Markov Chain Monte Carlo 125 14.1 Introduction... 125 14.2 Auxiliary Functions...... 126 14.2.1 Definition of Auxiliary Functions..... 126 14.2.2 Optimization Process for Auxiliary Functions... 126 14.2.3 Auxiliary Functions for Convex Functions...... 128 14.2.4 Objective Function Which Is the Sum of Convex and Concave Functions.... 128 14.3 Stochastic Auxiliary Functions..... 129 14.3.1 Stochastic Convex Learning (Summary)... 129 14.3.2 Auxiliary Stochastic Functions... 130 14.4 Metropolis Hastings Auxiliary Algorithm.... 130 14.5NumericalExperiments... 131 14.6Conclusion... 132 15 Mariya Korotchenko and Aleksandr Burmistrov Value Simulation of the Interacting Pair Number for Solution of the Monodisperse Coagulation Equation 135 15.1 Introduction... 135 15.2 Value Simulation for Integral Equations...... 137 15.2.1 Value Simulation of the Time Interval Between Interactions.. 138 15.2.2 VSIPN to Estimate the Monomer Concentration J H1... 139

Contents xi 15.2.3 VSIPN to Estimate the Monomer and Dimer Concentration J H12... 140 15.3 Results of the Numerical Experiments..... 141 15.4Conclusion... 143 16 Mikhail Mayorov and Paula A. Whitlock Parallelization of Algorithms for Solving a Three-Dimensional Sudoku Puzzle 145 16.1 Introduction..... 145 16.2 The Simulated Annealing Method..... 146 16.3 Successful Algorithms for Solving the Three-Dimensional Puzzle UsingMPI... 147 16.3.1 An Embarrassingly Parallel Algorithm... 148 16.3.2 Distributed Simulated Annealing Using a Master/Worker Organization...... 149 16.4 Results..... 149 16.5 Conclusions..... 152 17 Ilya N. Medvedev The Efficiency Study of Splitting and Branching in the Monte Carlo Method 155 17.1 Introduction..... 155 17.2 Randomized Branching.... 156 17.3 Splitting.... 159 18 Florian Pausinger and Wolfgang Ch. Schmid On the Asymptotics of a Lower Bound for the Diaphony of Generalized van der Corput Sequences 163 18.1 Introduction and Main Result.... 163 18.2 Definitions and Previous Results...... 165 18.3ProofofTheorem18.1... 166 19 Nikolay Petrov, Lyudmila Mihaylova, Amadou Gning, and Donka Angelova Group Object Tracking with a Sequential Monte Carlo Method Based on a Parameterized Likelihood Function 171 19.1 Motivation...... 171 19.2 Group Object Tracking within the Sequential Monte Carlo Framework 172

xii Contents 19.3 Measurement Likelihood for Group Object Tracking.... 173 19.3.1 Introduction of the Notion of the Visible Surface..... 174 19.3.2 Parametrization of the Visible Surface..... 175 19.4 Performance Evaluation...... 175 19.5 Conclusions... 177 20 David Rodríguez Rueda, Carlos Cotta, and Antonio J. Fernández-Leiva The Template Design Problem: A Perspective with Metaheuristics 181 20.1 Introduction... 181 20.2 The Template Design Problem..... 182 20.3 Solving the TDP under Deterministic Demand..... 183 20.3.1 Representation and Evaluation... 183 20.3.2 MetaheuristicApproaches... 185 20.4 Experimental Results..... 186 20.5 Conclusions and Future Work...... 190 21 Olympia Roeva A Comparison of Simulated Annealing and Genetic Algorithm Approaches for Cultivation Model Identification 193 21.1 Introduction... 193 21.2 Genetic Algorithm... 194 21.3 Simulated Annealing..... 195 21.4 E. coli MC4110 Fed-Batch Cultivation Process Model...... 196 21.5 Numerical Results and Discussion...... 197 21.6Conclusion... 198 22 Philipp Schwaha, Mihail Nedjalkov, Siegfried Selberherr, and Ivan Dimov Monte Carlo Investigations of Electron Decoherence due to Phonons 203 22.1 Introduction... 203 22.2 The Algorithms..... 205 22.2.1 Algorithm A..... 206 22.2.2 Algorithm B..... 207 22.2.3 Algorithm C..... 207

Contents xiii 23 Hidemaro Suwa and Synge Todo Geometric Allocation Approach for the Transition Kernel of a Markov Chain 213 23.1 Introduction..... 213 23.2 Geometric Approach...... 214 23.2.1 Reversible Kernel... 216 23.2.2 Irreversible Kernel...... 217 23.3BenchmarkTest... 217 23.4Conclusion... 219 24 Mario Ullrich Exact Sampling for the Ising Model at All Temperatures 223 24.1 Introduction..... 223 24.2TheIsingModel... 224 24.3 Exact Sampling...... 227 24.4 The Random Cluster Model..... 228 24.5 Exact Sampling for the Ising Model... 230