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Transcription:

Version 1.18.2 Package canvasxpress Title Visualization Package for CanvasXpress in R January 19, 2018 Enables creation of visualizations using the CanvasXpress framework in R. CanvasXpress is a standalone JavaScript library for reproducible research with complete tracking of data and end-user modifications stored in a single PNG image that can be played back. See <http://canvasxpress.org> for more information. Type Package License GPL-3 Encoding UTF-8 Author Isaac Neuhaus [aut, cre], Connie Brett [ctb] Maintainer Connie Brett <connie@aggregate-genius.com> URL https://github.com/neuhausi/canvasxpress.git BugReports https://github.com/neuhausi/canvasxpress/issues Depends R (>= 3.3.0) Imports htmlwidgets (>= 0.8) RoxygenNote 6.0.1 Suggests shiny (>= 0.13.2), knitr, rmarkdown, dplyr, testthat, limma, grdevices, covr, magrittr VignetteBuilder knitr NeedsCompilation no Repository CRAN Date/Publication 2018-01-18 23:40:07 UTC R topics documented: canvasxpress-package................................... 2 canvasxpress........................................ 2 1

2 canvasxpress.................................... 3 cxshinyexample...................................... 4.................................... 4 Index 6 canvasxpress-package CanvasXpress Visualization Package A package to assist in creating visualizations in CanvasXpress in R. Details CanvasXpress is a standalone JavaScript library for reproducible research with complete tracking of data and end-user modifications stored in a single PNG image that can be played back for an extensive set of visualizations. More Information http://canvasxpress.org browsevignettes(package = "canvasxpress") Useful links: https://github.com/neuhausi/canvasxpress.git Report bugs at https://github.com/neuhausi/canvasxpress/issues canvasxpress canvasxpress Custom HTML widget creation function based on widget YAML and JavaScript for use in any html-compatible context canvasxpress(data = NULL, smpannot = NULL, varannot = NULL, graphtype = "Scatter2D", events = NULL, afterrender = NULL, pretty = FALSE, digits = 4, width = 600, height = 400, destroy = FALSE,...)

3 data data.frame-, matrix-, or list- classed data object smpannot additional data that applies to samples (columns) varannot additional data that applies to variables (rows) graphtype type of graph to be plotted - default = "Scatter2D" events user-defined events (e.g. mousemove, mouseout, click and dblclick) afterrender event triggered after rendering pretty print tagged code (json/html) nicely - default = FALSE digits display digits - default = 4 width plot width (valid CSS units) - default = 600px height plot height (valid CSS units) - default = 400px destroy used to indicate removal of a plot - default = FALSE... additional parameters passed to canvasxpress htmlwidgets object Output creation function for in Shiny applications and interactive Rmd documents (outputid, width = "100%", height = "400px") outputid shiny unique ID width width of the element - default = 100% height height of the element - default = 400px Output function that enables the use of the widget in applications cxshinyexample

4 cxshinyexample Create Shiny Example Application This function runs one of the available shiny example applications. To see the list of available example applications run the function with no inputs cxshinyexample(example = NULL) example character name of a valid example application. Launches a running shiny example application Render function for in Shiny applications and interactive Rmd documents (expr, env = parent.frame(), quoted = FALSE) expr env quoted expression used to render the environment to use - default = parent.frame() whether the expression is quoted - default = FALSE Render function that enables the use of the widget in applications

5 Destroy When there exists a need to visually remove a plot from a Shiny application when it is not being immediately replaced with a new plot use the destroy option as in: ({canvasxpress(destroy = TRUE)}) cxshinyexample

Index _PACKAGE (canvasxpress-package), 2 canvasxpress, 2 canvasxpress-package, 2, 3, 4, 5 cxshinyexample, 3, 4, 5, 3, 4, 4 6