Big Data Processing Technologies. Chentao Wu Associate Professor Dept. of Computer Science and Engineering

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Big Data Processing Technologies Chentao Wu Associate Professor Dept. of Computer Science and Engineering wuct@cs.sjtu.edu.cn

Schedule (1) Storage system part (first eight weeks) lec1: Introduction on big data and cloud computing Iec2: Introduction on data storage lec3: Data reliability (Replication/Archive/EC) lec4: Data consistency problem lec5: Block storage and file storage lec6: Object-based storage lec7: Distributed file system lec8: Metadata management

Schedule (2) Reading & Project part (middle two/three weeks) Database part (last five weeks) lec8: Introduction on database lec10: Relational database (SQL) lec11: Relational database (NoSQL) lec12: Distributed database lec13: Main memory database

Collaborators

Contents 1 Interfaces of Storage Devices

ATA/IDE Interface AT Attachment (ATA), is an interface standard for the connection of storage devices such as hard disk drives, floppy disk drives, and optical disc drives in computers. The standard is maintained by the X3/INCITS committee. Parallel ATA developed by Western Digital Also called IDE Integrated Device Electronics

ATA I/O Connector The ATA interface connector is normally a 40-pin header-type connector with pins spaced 0.1 inches apart and generally keyed to prevent the possibility of installing it upside down. Plugging in an IDE cable backward usually won t cause any permanent damage, however, it can lock up the system and prevent it from running at all.

Dual Drive Configurations Most IDE drives can be configured with three settings. The diagram illustrates the settings of master, slave, and cable select

Small Computer System Interface (SCSI) SCSI refers to the types of cables and ports used to connect certain types of hard drives, optical drives, scanners, and other peripheral devices to a computer. Fast SCSI: 10 MBps; connects 8 devices Fast Wide SCSI: 20 MBps; connects 16 devices Ultra Wide SCSI: 40 MBps; connects 16 devices Ultra3 SCSI: 160 MBps; connects 16 devices Ultra-640 SCSI: 640 MBps; connects 16 devices

Serial ATA (SATA) Serial ATA (SATA) is a computer bus interface that connects host bus adapters to mass storage devices such as hard disk drives, optical drives, and solid-state drives. Compared to PATA/IDE reduced cable size and cost seven conductors instead of 40 or 80 native hot swapping faster data transfer through higher signaling rates through an I/O queuing protocol

Serial Attached SCSI (SAS) Serial Attached SCSI (SAS) is a point-to-point serial protocol that moves data to and from computer storage devices such as hard drives and tape drives. SAS replaces the older Parallel SCSI bus technology.

USB Universal Serial Bus (USB), is an industry standard initially developed in the mid-1990s that defines the cables, connectors and communications protocols used in a bus for connection, communication, and power supply between computers and electronic devices.

PCI Express (PCIe) PCI Express (Peripheral Component Interconnect Express) is a high-speed serial computer expansion bus standard, designed to replace the older PCI, PCI-X, and AGP bus standards. Intel NVMe SSD with PCIe PCI Express 4/16/1/16 Typical PCI

Infiniband (IB) InfiniBand (IB) is a computer-networking communications standard used in high-performance computing that features very high throughput and very low latency. Support RDMA

iscsi (Internet SCSI)(1) Why iscsi? Storage Area Networks (SANs) based on serial gigabit transports overcome the distance, performance, scalability and availability restrictions of parallel SCSI implementations. What is iscsi? Internet SCSI (iscsi) protocol Defined by the IP Storage work group of the IETF IETF RFC 3720

iscsi (Internet SCSI) (2) iscsi Protocol Layering Model

iscsi (Internet SCSI) (3) Encapsulates SCSI Command Descriptor Blocks (CDBs)

iscsi (Internet SCSI) (4) iscsi Protocol Highest Level

iscsi (Internet SCSI) (5) Data Encapsulation

iscsi (Internet SCSI) (6) iscsi Protocol Data Unit (PDU)

iscsi Command Flow From application to Logical Unit (LU)

FC (Fiber Channel) Fiber Channel, or FC, is a high-speed network technology (commonly running at 1, 2, 4, 8, 16, 32, and 128 gigabit per second rates) primarily used to connect computer data storage to servers. Fibre Channel is mainly used in Storage Area Networks (SAN) in commercial data centers.

FC Node Ports Provide physical interface for communicating with other nodes Exist on HBA (Host Bus Adapter) in server Front-end adapters in storage Each port has a transmit (Tx) link and a receive (Rx) link Node Port 0 Port 0 Tx Rx Link Port 1 Port n

FC Cables Implementation uses Copper cables for short distance Optical fiber cables for long distance Two types of optical cables: single-mode and multimode Single-mode Cladding Multimode Core Cladding Core Light In Carries single beam of light Can carry multiple beams of light (a) simultaneously Multi-mode Fiber Light In Single-mode Fiber (b) Single-mode Fiber Distance up to 10km Used for short distance (Modal dispersion weakens signal strength after certain distance ) Light In Cladding Core (a) Multimode Multi-mode Fiber

FC Connectors Attached at the end of a cable Enable swift connection and disconnection of the cable to and from a port Standard Connector Commonly used connectors for fiber optic cables are: Standard Connector (SC) Lucent Connector Duplex connectors Lucent Connector (LC) Duplex connectors Straight Tip (ST) Patch panel connectors Simplex connectors Straight Tip Connector

Fibre Channel Protocol Stack Upper Layer Protocol Example: SCSI, HIPPI, ESCON, ATM, IP FC-4 FC-2 FC-1 Upper Layer Protocol Mapping Framing/Flow Control Encode/Decode FC-0 1 Gb/s 2 Gb/s 4 Gb/s 8 Gb/s 16 Gb/s FC Layer Function Features Specified by FC Layer FC-4 Mapping interface FC-3 Common services Not implemented Mapping upper layer protocol (e.g. SCSI) to lower FC layers FC-2 Routing, flow control Frame structure, FC addressing, flow control FC-1 Encode/decode 8b/10b or 64b/66b encoding, bit and frame synchronization FC-0 Physical layer Media, cables, connector

FC Addressing in Switched Fabric FC Address is assigned to nodes during fabric login Used for communication between nodes within FC SAN Address format Domain ID is a unique number provided to each switch in the fabric 239 addresses are available for domain ID Maximum possible number of node ports in a switched fabric: 239 domains X 256 areas X 256 ports = 15,663,104

FCIP (IP SAN Protocol) IP-based protocol that is used to connect distributed FC SAN islands Creates virtual FC links over existing IP network that is used to transport FC data between different FC SANs Encapsulates FC frames onto IP packet Provides disaster recovery solution

FCIP Topology Servers Servers Server Server FC SAN FCIP Gateway FCIP Gateway FC SAN IP Storage Array Storage Array

FCIP Protocol Stack Application SCSI Commands, Data, and Status FC Frame FCP (SCSI over FC) FCIP TCP FC to IP Encapsulation IP Physical Media FC Frame SOF FC Header SCSI Data CRC EOF FCIP Encapsulation IP Packet IP Header TCP Header FCIP Header IP Payload

Contents 2 Block Storage

The SNIA shared storage model (1) Application File/record layer Database (dbms) File system (FS) Host Block aggregation Network Device Storage devices (disks, ) Block layer

The SNIA shared storage model (2)

Typical Block Devices Hard Disk Drives (HDDs) Solid State Drives (SSDs) Storage Arrays (RAID) Storage Area Network (SAN) Dedicated high speed network of servers and shared storage devices

Storage Area Network (SAN)

Features of a SAN Provide block level data access Resource Consolidation Centralized storage and management Scalability Theoretical limit: Appx. 15 million devices Secure Access Servers FC SAN Storage Array Storage Array

Types of SANs in Data Center Storage Area Network (SAN) IP SAN FC SAN FCoE SAN Infiniband SAN??

Drivers for FCoE FCoE is a protocol that transports FC data over Ethernet network (Converged Enhanced Ethernet) FCoE is being positioned as a storage networking option because: Enables consolidation of FC SAN traffic and Ethernet traffic onto a common Ethernet infrastructure Reduces the number of adapters, switch ports, and cables Reduces cost and eases data center management Reduces power and cooling cost, and floor space

Data Center Infrastructure Before Using FCoE Servers Servers Server Server FC Switches IP Switches FC Switches LAN Storage Array Storage Array

Data Center Infrastructure After Using FCoE Servers Servers Server Server FCoE Switches FC Switches LAN Storage Array Storage Array

Components of an FCoE Network Converged Network Adapter (CNA) Cable FCoE switch

Converged Network Adapter (CNA) Provides functionality of both a standard NIC and an FC HBA Eliminates the need to deploy separate adapters and cables for FC and Ethernet communications Contains separate modules for 10 Gigabit Ethernet, FC, and FCoE ASICs FCoE ASIC encapsulates FC frames into Ethernet frames

Cable Two options are available for FCoE cabling Copper based Twinax cable Standard fiber optical cable Twinax Cable Suitable for shorter distances (up to 10 meters) Requires less power and are less expensive than fiber optical cable Uses Small Form Factor Pluggable Plus (SFP+) connector Fiber Optical Cable Can run over longer distances Relatively more expensive than Twinax cables Uses Small Form Factor Pluggable Plus (SFP+) connector

FCoE Switch Provides both Ethernet and FC switch functionalities Consists of FCF, Ethernet bridge, and set of CEE ports and FC ports (optional) FCF encapsulates and deencapsulates FC frames Forwards frames based on Ethertype FC Port Ethernet Port FC Port FC Port FC Port Fibre Channel Forwarder (FCF) Ethernet Bridge Ethernet Port Ethernet Port Ethernet Port

FCoE Frame Mapping OSI Stack 7 - Application FCoE Protocol Stack FC Protocol Stack 6 - Presentation FC - 4 FC - 4 Protocol map 5 - Session FC Layers FC - 3 FC - 3 Services 4 - Transport FC - 2 FC - 2 Framing 3 - Network FCoE Mapping FC - 1 Data enc/dec 2 - Data Link 1 - Physical IEEE 802.1q Layers 2 - MAC 1 - Physical Ethernet FC - 0 Physical

Converged Enhanced Ethernet Provides lossless Ethernet Lossless Ethernet requires following functionalities: Priority-based flow control (PFC) Enhanced transmission selection (ETS) Congestion notification (CN) Data center bridging exchange protocol(dcbx)

Priority-Based Flow Control (PFC) Creates eight virtual links on a single physical link Uses PAUSE capability of Ethernet for each virtual link A virtual link can be paused and restarted independently PAUSE mechanism is based on user priorities or classes of service

Enhanced Transmission Selection (ETS) Allocates bandwidth to different traffic classes such as LAN, SAN, and Inter Process Communication (IPC) Provides available bandwidth to other classes of traffic when a particular class of traffic does not use its allocated bandwidth

Congestion Notification (CN) Provides a mechanism for detecting congestion and notifying the source Enables a switch to send a signal to other ports that need to stop or slow down their transmissions Rate limiting to avoid packet loss Host (Node A) FCoE Switch FCoE Switch FCoE Switch Congestion Notification Message Congestion Storage Array (Node B)

Data Center Bridging Exchange Protocol (DCBX) Enables Convergence Enhanced Ethernet (CEE) devices to convey and configure their features with other CEE devices in the network Allows a switch to distribute configuration values to attached adapters Ensures consistent configuration across network

Contents 3 File Storage

File Sharing Environment File sharing enables users to share files with other users Creator or owner of a file determines the type of access to be given to other users File sharing environment ensures data integrity when multiple users access a shared file at the same time Examples of file sharing methods: File Transfer Protocol (FTP) Distributed File System (DFS) Network File System (NFS) and Common Internet File System (CIFS) Peer-to-Peer (P2P)

File Sharing Technology Evolution Stand Alone PC Portable Media for File Sharing Networked PCs File Sharing using File Servers File Servers File Sharing using NAS NAS Device

What is NAS (Network-Attached Storage)? NAS It is an IP-based, dedicated, high-performance file sharing and storage device. Enables NAS clients to share files over IP network Uses specialized operating system that is optimized for file I/O Enables both UNIX and Windows users to share data Clients Application Servers LAN NAS Device Print Server

General Purpose Servers Vs. NAS Devices Applications Print Drivers File System File System Operating System Network Interface Operating System Network Interface Single Purpose NAS Device General Purpose Servers (Windows or UNIX)

Benefits of NAS Improved efficiency Improved flexibility Centralized storage Simplified management Scalability High availability through native clustering and replication Security authentication, authorization, and file locking in conjunction with industry-standard security Low cost Ease of deployment

Components of NAS UNIX Client NFS IP NAS Head Network Interface NFS CIFS NAS Device OS CIFS Storage Interface Windows Client Storage Array NAS Device

NAS File Sharing Protocols Two common NAS file sharing protocols are: Common Internet File System (CIFS) Network File System (NFS)

Common Internet File System (CIFS) Client-server application protocol An open variation of the Server Message Block (SMB) protocol Enables clients to access files that are on a server over TCP/IP Stateful Protocol Maintains connection information regarding every connected client Can automatically restore connections and reopen files that were open prior to interruption

Network File System (NFS) Client-server application protocol Enables clients to access files that are on a server Uses Remote Procedure Call (RPC) mechanism to provide access to remote file system Currently, three versions of NFS are in use: NFS v2 is stateless and uses UDP as transport layer protocol NFS v3 is stateless and uses UDP or optionally TCP as transport layer protocol NFS v4 is stateful and uses TCP as transport layer protocol

NAS I/O Operation Application Operating System NFS or CIFS Storage Interface NAS Operating System NFS and CIFS 3 2 Block I/O TCP/IP Stack Network Interface 1 TCP/IP Stack Network Interface Storage Array Client File I/O 4 NAS Head

NAS Implementation Unified NAS Consolidates NAS-based (file-level) and SAN-based (block-level) access on a single storage platform Supports both CIFS and NFS protocols for file access and iscsi and FC protocols for block level access Provides unified management for both NAS head and storage

Unified NAS Connectivity FC SAN Block Data Access FC Hosts iscsi SAN Block Data Access FC Port iscsi Port iscsi Hosts Ethernet Port Unified NAS Ethernet File Access NAS Clients

NAS Implementation Gateway NAS Uses external and independently-managed storage NAS heads access SAN-attached or direct-attached storage arrays NAS heads share storage with other application servers that perform block I/O Requires separate management of NAS head and storage

Gateway NAS Connectivity Application Servers Client Client IP FC SAN Application Server Storage Array Client Gateway NAS

NAS Implementation Scale-out NAS Pools multiple nodes together in a cluster that works as a single NAS device Pool is managed centrally Scales performance and/or capacity with addition of nodes to the pool non-disruptively Creates a single file system that runs on all nodes in the cluster Clients, connected to any node, can access entire file system File system grows dynamically as nodes are added Stripes data across all nodes in a pool along with mirror or parity protection

Scale-out NAS Connectivity External Switch Node 1 Node 2 Node 3 Internal Switch 1 Internal Switch 2 InfiniBand Switches

NAS Use Case 1 Server Consolidation with NAS Traditional File Server Environment NAS Environment NAS Device UNIX File Server Windows File Server IP IP UNIX Client Windows Client UNIX Client Windows Client

NAS Use Case 2 Storage Consolidation with NAS Traditional File Server Environment Internal Users NAS Environment Internal Users Business Clients Surfers, Shoppers Business Clients Surfers, Shoppers IP IP Web and Database Servers NAS Head Web and Database Servers Windows File Server FC SAN UNIX File Server FC SAN Storage Storage

File-level Virtualization Eliminates dependency between data accessed at the file-level and the location where the files are physically stored Enables users to use a logical path, rather than a physical path, to access files Uses global namespace that maps logical path of file resources to their physical path Provides non-disruptive file mobility across file servers or NAS devices

Comparison: Before and After File-level Virtualization Before File-level Virtualization Clients Clients Clients After File-level Virtualization Clients Virtualization Appliance NAS Head NAS Head NAS Head NAS Head Storage Array File Sharing Environment Dependency between client access and file location Underutilized storage resources Downtime is caused by data migrations Storage Array File Sharing Environment Break dependencies between client access and file location Storage utilization is optimized Non-disruptive migrations

Contents 4 SAN vs. NAS

FC vs TCP/IP (FC SAN vs. IP SAN)

Application Protocol Support

Transporting Application Data

Contents 5 Cloud NAS & SAN

Cloud Storage Clients Characteristics Hybrid: Web+Local (App) RESTful HTTP Disconnected Operations Local Caching Data Synchronization Data as Objects with Metadata Examples Mac & iphone: Apple idisk/icloud Windows: Microsoft Live Sync Linux: Ubuntu One Google Docs Social apps

Cloud block Storage Unified Storage

Cloud NAS Architecture Azure StorSimple Nasuni Panzura Global management on namespace Lock management Privilege management Cache Optimization Deduplication

Cloud NAS Architecture Distributed FS

Microsoft Azure File Storage (1) Support SMB/RESTful Protocols File share for a VM region

Microsoft Azure File Storage (2) Cloud Service VM Web Site SMB 2.1 REST SMB 2.1 REST REST Azure Files

EMC Isilon

EMC Isilon Scale Out NAS

Ali NAS Support Multiple Protocols NFS/CIFS Accesses are in a Region Support Virtual Private Cloud (VPC) One file can be shared via multiple Protocols High Scalability High Reliability High Availability

Thank you!