Parallel Programming, MPI Lecture 2
|
|
|
- Cecil Hopkins
- 5 years ago
- Views:
Transcription
1 Parallel Programming, MPI Lecture 2 Ehsan Nedaaee Oskoee 1 1 Department of Physics IASBS IPM Grid and HPC workshop IV, 2011
2 Outline 1 Point-to-Point Communication Non Blocking PTP Communication 2 Collective Communication
3 Outline 1 Point-to-Point Communication Non Blocking PTP Communication 2 Collective Communication
4 Point-to-Point Communication Non Blocking Send Operation MPI_ISEND(buf, count, datatype, dest, tag, comm, request) buf initial address of send buffer count number of entries to send datatype datatype of each entry dest rank of destination tag message tag comm communicator OUT request
5 Point-to-Point Communication C Version int MPI_Isend(void* buf, int count, MPI_Datatype datatype, int dest, int tag, MPI_Comm, comm, MPI_Request *request) Fortran Version MPI_ISEND(BUF, COUNT, DATATYPE, DEST, TAG, COMM, REQUEST, IERROR) <type> BUF(*) TEGER COUNT, DATATYPE, DEST, TAG, COMM, REQUEST, IERROR
6 Point-to-Point Communication Non Blocking Receive Operation MPI_IRECV(buf, count, datatype, source, tag, comm, request)â OUT buf count datatype source rank of source tag comm OUT request request handle
7 Point-to-Point Communication C Version int MPI_Irecv(void* buf, int count, MPI_Datatype datatype, int source, int tag, MPI_Comm comm, MPI_Request *request) Fortran Version MPI_IRECV(BUF, COUNT, DATATYPE, SOURCE, TAG, COMM, REQUEST,IERROR) <type> BUF(*) TEGER COUNT, DATATYPE, SOURCE, TAG, COMM, REQUEST, IERROR
8 Point-to-Point Communication Completion Operations MPI_WAIT(request, status) OUT request OUT status C Version int MPI_Wait(MPI_Request *request, MPI_Status *status) Fortran Version MPI_WAIT(REQUEST, STATUS, IERROR) TEGER REQUEST, STATUS(MPI_STATUS_SIZE), IERROR
9 Point-to-Point Communication Completion Operations MPI_TEST(request,flag,status) OUT request OUT flag OUT status C Version int MPI_Test(MPI_Request *request, int *flag, MPI_Status *status) Fortran Version MPI_TEST(REQUEST, FLAG, STATUS, IERROR) LOGICAL FLAG TEGER REQUEST, STATUS(MPI_STATUS_SIZE), IERROR
10 Collective Communication Broadcast
11 Collective Communication Broadcast MPI_BCAST(buffer,count,datatype,root,comm) OUT buffer count datatype root comm C Version int MPI_Bcast(void* buffer, int count, MPI_Datatype datatype int root, MPI_Comm comm) Fortran Version MPI_BCAST(BUFFER,COUNT,DATATYPE,ROOT,COMM,IERROR) <type> BUFFER(*) TEGER COUNT, DATATYPE, ROOT, COMM, IERROR
12 Collective Communication Barrier MPI_BARRIER(comm) comm C Version int MPI_Barrier(MPI_Comm com) Fortran Version MPI_BARRIER(COMM, IERROR) TEGER COMM, IERROR
13 Collective Communication Gather and Scatter
14 Collective Communication MPI_GATHER(sendbuf,sendcount,sendtype,recvbuf,recvcount,recvtyp Gather sendbuf sendcount sendtype OUT recvbuf recvcount recvtype root comm
15 Collective Communication C Version int int MPI_Gather(void* sendbuf, int sendcount, MPI_Datatype senndtype void* recvbuf, int recvcount, MPI_Datatype recvtype, int root, MPI_Comm comm) Fortran Version MPI_GATHER(SENDBUF,SENDCOUNT,SENDTYPE,RECVBUF, RECVCOUNT, RECVTYPE,ROOT,COMM,IERROR) <type> SENDBUF(*), RECVBUF(*) TEGER SENDCOUNT, SENDTYPE,RECVCOUNT, RECVTYPE ROOT, COMM, IERROR
16 Collective Communication Gather
17 Collective Communication GatherV MPI_GATERV(sendbuf,sendcount,sendtype,recvbuf,recvcounts, displs, recvtype,root,comm) OUT sendbuf sendcount sendtype recvbuf recvcount displs recvtype root comm
18 Collective Communication C Version int MPI_Gatherv(void* sendbuf, int sendcount, MPI_Datatype senndtype void* recvbuf, int recvcount, MPI_Datatype recvtype, int *displs, int root, MPI_Comm comm) Fortran Version MPI_GATHER(SENDBUF,SENDCOUNT,SENDTYPE,RECVBUF, RECVCOUNT, DISPLS, RECVTYPE,ROOT,COMM,IERROR) <type> SENDBUF(*), RECVBUF(*) TEGER SENDCOUNT, SENDTYPE,RECVCOUNT(*), DISPLS(*), RECVTYPE ROOT, COMM, IERROR
19 Collective Communication GatherV
20 Collective Communication Scatter MPI_SCATER(sendbuf,sendcount,sendtype,recvbuf,recvcount, recvtype,root,comm) OUT sendbuf sendcount sendtype recvbuf recvcount recvtype root comm
21 Collective Communication C Version int MPI_Scater(void* sendbuf, int sendcount, MPI_Datatype senndtype void* recvbuf, int recvcount, MPI_Datatype recvtype, int root, MPI_Comm comm) Fortran Version MPI_SCATER(SENDBUF,SENDCOUNT,SENDTYPE,RECVBUF, RECVCOUNT, RECVTYPE,ROOT,COMM,IERROR) <type> SENDBUF(*), RECVBUF(*) TEGER SENDCOUNT, SENDTYPE,RECVCOUNT, RECVTYPE ROOT, COMM, IERROR
22 Collective Communication scatter
23 Collective Communication ScatterV MPI_SCATTERV(sendbuf,sendcount,displs,sendtype,recvbuf, recvcounts,recvtype, root,comm) OUT sendbuf sendcount displs sendtype recvbuf recvcount recvtype root comm
24 Collective Communication C Version int MPI_Scatterv(void* sendbuf, int *displs,int sendcount, MPI_Datatype senndtype, void* recvbuf, int recvcount, MPI_Datatype recvtype, int root, MPI_Comm comm) Fortran Version MPI_GATHER(SENDBUF,SENDCOUNT,DISPLS,SENDTYPE, RECVBUF,RECVCOUNT, RECVTYPE,ROOT,COMM,IERROR) <type> SENDBUF(*), RECVBUF(*) TEGER SENDCOUNT, SENDTYPE,RECVCOUNT(*), DISPLS(*), RECVTYPE ROOT, COMM, IERROR
25 Collective Communication VcatterV
26 Collective Communication All Gather
27 Collective Communication All to All
28 For Further Reading I [1] M. Snir, S. Otto, S. Huss-Ledermann, D. Walker & J. Dongarra MPI: The Complete Reference. The MIT Press [2] Message-Passing Interface Forum MPI2: Extensions to the Message-Passing Interface. University of Tennessee, Knoxville, Tennessee, [3] Peter S. Pacheco A User Guide to MPI, tutorial. University of San Francisco, 1998.
29 The End That s All Folks
Non-Blocking Communications
Non-Blocking Communications Deadlock 1 5 2 3 4 Communicator 0 2 Completion The mode of a communication determines when its constituent operations complete. - i.e. synchronous / asynchronous The form of
Non-Blocking Communications
Non-Blocking Communications Reusing this material This work is licensed under a Creative Commons Attribution- NonCommercial-ShareAlike 4.0 International License. http://creativecommons.org/licenses/by-nc-sa/4.0/deed.en_us
Parallel programming MPI
Parallel programming MPI Distributed memory Each unit has its own memory space If a unit needs data in some other memory space, explicit communication (often through network) is required Point-to-point
The MPI Message-passing Standard Practical use and implementation (V) SPD Course 6/03/2017 Massimo Coppola
The MPI Message-passing Standard Practical use and implementation (V) SPD Course 6/03/2017 Massimo Coppola Intracommunicators COLLECTIVE COMMUNICATIONS SPD - MPI Standard Use and Implementation (5) 2 Collectives
MPI. (message passing, MIMD)
MPI (message passing, MIMD) What is MPI? a message-passing library specification extension of C/C++ (and Fortran) message passing for distributed memory parallel programming Features of MPI Point-to-point
Outline. Communication modes MPI Message Passing Interface Standard
MPI THOAI NAM Outline Communication modes MPI Message Passing Interface Standard TERMs (1) Blocking If return from the procedure indicates the user is allowed to reuse resources specified in the call Non-blocking
Collective Communications
Collective Communications Reusing this material This work is licensed under a Creative Commons Attribution- NonCommercial-ShareAlike 4.0 International License. http://creativecommons.org/licenses/by-nc-sa/4.0/deed.en_us
HPC Parallel Programing Multi-node Computation with MPI - I
HPC Parallel Programing Multi-node Computation with MPI - I Parallelization and Optimization Group TATA Consultancy Services, Sahyadri Park Pune, India TCS all rights reserved April 29, 2013 Copyright
Distributed Memory Systems: Part IV
Chapter 5 Distributed Memory Systems: Part IV Max Planck Institute Magdeburg Jens Saak, Scientific Computing II 293/342 The Message Passing Interface is a standard for creation of parallel programs using
Collective Communications II
Collective Communications II Ned Nedialkov McMaster University Canada SE/CS 4F03 January 2014 Outline Scatter Example: parallel A b Distributing a matrix Gather Serial A b Parallel A b Allocating memory
MPI Collective communication
MPI Collective communication CPS343 Parallel and High Performance Computing Spring 2018 CPS343 (Parallel and HPC) MPI Collective communication Spring 2018 1 / 43 Outline 1 MPI Collective communication
Introduction to MPI. HY555 Parallel Systems and Grids Fall 2003
Introduction to MPI HY555 Parallel Systems and Grids Fall 2003 Outline MPI layout Sending and receiving messages Collective communication Datatypes An example Compiling and running Typical layout of an
What s in this talk? Quick Introduction. Programming in Parallel
What s in this talk? Parallel programming methodologies - why MPI? Where can I use MPI? MPI in action Getting MPI to work at Warwick Examples MPI: Parallel Programming for Extreme Machines Si Hammond,
Message Passing Interface
Message Passing Interface DPHPC15 TA: Salvatore Di Girolamo DSM (Distributed Shared Memory) Message Passing MPI (Message Passing Interface) A message passing specification implemented
Cluster Computing MPI. Industrial Standard Message Passing
MPI Industrial Standard Message Passing MPI Features Industrial Standard Highly portable Widely available SPMD programming model Synchronous execution MPI Outer scope int MPI_Init( int *argc, char ** argv)
Message Passing Interface. most of the slides taken from Hanjun Kim
Message Passing Interface most of the slides taken from Hanjun Kim Message Passing Pros Scalable, Flexible Cons Someone says it s more difficult than DSM MPI (Message Passing Interface) A standard message
Introduction to MPI Part II Collective Communications and communicators
Introduction to MPI Part II Collective Communications and communicators Andrew Emerson, Fabio Affinito {a.emerson,f.affinito}@cineca.it SuperComputing Applications and Innovation Department Collective
Introduction to MPI. Ricardo Fonseca. https://sites.google.com/view/rafonseca2017/
Introduction to MPI Ricardo Fonseca https://sites.google.com/view/rafonseca2017/ Outline Distributed Memory Programming (MPI) Message Passing Model Initializing and terminating programs Point to point
MPI: Parallel Programming for Extreme Machines. Si Hammond, High Performance Systems Group
MPI: Parallel Programming for Extreme Machines Si Hammond, High Performance Systems Group Quick Introduction Si Hammond, (sdh@dcs.warwick.ac.uk) WPRF/PhD Research student, High Performance Systems Group,
CSE 613: Parallel Programming. Lecture 21 ( The Message Passing Interface )
CSE 613: Parallel Programming Lecture 21 ( The Message Passing Interface ) Jesmin Jahan Tithi Department of Computer Science SUNY Stony Brook Fall 2013 ( Slides from Rezaul A. Chowdhury ) Principles of
High Performance Computing
High Performance Computing Course Notes 2009-2010 2010 Message Passing Programming II 1 Communications Point-to-point communications: involving exact two processes, one sender and one receiver For example,
Standard MPI - Message Passing Interface
c Ewa Szynkiewicz, 2007 1 Standard MPI - Message Passing Interface The message-passing paradigm is one of the oldest and most widely used approaches for programming parallel machines, especially those
COMP 322: Fundamentals of Parallel Programming
COMP 322: Fundamentals of Parallel Programming https://wiki.rice.edu/confluence/display/parprog/comp322 Lecture 37: Introduction to MPI (contd) Vivek Sarkar Department of Computer Science Rice University
Outline. Communication modes MPI Message Passing Interface Standard. Khoa Coâng Ngheä Thoâng Tin Ñaïi Hoïc Baùch Khoa Tp.HCM
THOAI NAM Outline Communication modes MPI Message Passing Interface Standard TERMs (1) Blocking If return from the procedure indicates the user is allowed to reuse resources specified in the call Non-blocking
Distributed Systems + Middleware Advanced Message Passing with MPI
Distributed Systems + Middleware Advanced Message Passing with MPI Gianpaolo Cugola Dipartimento di Elettronica e Informazione Politecnico, Italy cugola@elet.polimi.it http://home.dei.polimi.it/cugola
Parallel Programming. Using MPI (Message Passing Interface)
Parallel Programming Using MPI (Message Passing Interface) Message Passing Model Simple implementation of the task/channel model Task Process Channel Message Suitable for a multicomputer Number of processes
Programming with MPI Collectives
Programming with MPI Collectives Jan Thorbecke Type to enter text Delft University of Technology Challenge the future Collectives Classes Communication types exercise: BroadcastBarrier Gather Scatter exercise:
Basic MPI Communications. Basic MPI Communications (cont d)
Basic MPI Communications MPI provides two non-blocking routines: MPI_Isend(buf,cnt,type,dst,tag,comm,reqHandle) buf: source of data to be sent cnt: number of data elements to be sent type: type of each
Working with IITJ HPC Environment
Working with IITJ HPC Environment by Training Agenda for 23 Dec 2011 1. Understanding Directory structure of IITJ HPC 2. User vs root 3. What is bash_profile 4. How to install any source code in your user
More about MPI programming. More about MPI programming p. 1
More about MPI programming More about MPI programming p. 1 Some recaps (1) One way of categorizing parallel computers is by looking at the memory configuration: In shared-memory systems, the CPUs share
L15: Putting it together: N-body (Ch. 6)!
Outline L15: Putting it together: N-body (Ch. 6)! October 30, 2012! Review MPI Communication - Blocking - Non-Blocking - One-Sided - Point-to-Point vs. Collective Chapter 6 shows two algorithms (N-body
Introduction to MPI: Part II
Introduction to MPI: Part II Pawel Pomorski, University of Waterloo, SHARCNET ppomorsk@sharcnetca November 25, 2015 Summary of Part I: To write working MPI (Message Passing Interface) parallel programs
High-Performance Computing: MPI (ctd)
High-Performance Computing: MPI (ctd) Adrian F. Clark: alien@essex.ac.uk 2015 16 Adrian F. Clark: alien@essex.ac.uk High-Performance Computing: MPI (ctd) 2015 16 1 / 22 A reminder Last time, we started
Topics. Lecture 7. Review. Other MPI collective functions. Collective Communication (cont d) MPI Programming (III)
Topics Lecture 7 MPI Programming (III) Collective communication (cont d) Point-to-point communication Basic point-to-point communication Non-blocking point-to-point communication Four modes of blocking
Today's agenda. Parallel Programming for Multicore Machines Using OpenMP and MPI
Today's agenda Homework discussion Bandwidth and latency in theory and in practice Paired and Nonblocking Pt2Pt Communications Other Point to Point routines Collective Communications: One-with-All Collective
Lecture 7: More about MPI programming. Lecture 7: More about MPI programming p. 1
Lecture 7: More about MPI programming Lecture 7: More about MPI programming p. 1 Some recaps (1) One way of categorizing parallel computers is by looking at the memory configuration: In shared-memory systems
Recap of Parallelism & MPI
Recap of Parallelism & MPI Chris Brady Heather Ratcliffe The Angry Penguin, used under creative commons licence from Swantje Hess and Jannis Pohlmann. Warwick RSE 13/12/2017 Parallel programming Break
MPI point-to-point communication
MPI point-to-point communication Slides Sebastian von Alfthan CSC Tieteen tietotekniikan keskus Oy CSC IT Center for Science Ltd. Introduction MPI processes are independent, they communicate to coordinate
Introduction to MPI. SuperComputing Applications and Innovation Department 1 / 143
Introduction to MPI Isabella Baccarelli - i.baccarelli@cineca.it Mariella Ippolito - m.ippolito@cineca.it Cristiano Padrin - c.padrin@cineca.it Vittorio Ruggiero - v.ruggiero@cineca.it SuperComputing Applications
CS 179: GPU Programming. Lecture 14: Inter-process Communication
CS 179: GPU Programming Lecture 14: Inter-process Communication The Problem What if we want to use GPUs across a distributed system? GPU cluster, CSIRO Distributed System A collection of computers Each
CDP. MPI Derived Data Types and Collective Communication
CDP MPI Derived Data Types and Collective Communication Why Derived Data Types? Elements in an MPI message are of the same type. Complex data, requires two separate messages. Bad example: typedef struct
Part - II. Message Passing Interface. Dheeraj Bhardwaj
Part - II Dheeraj Bhardwaj Department of Computer Science & Engineering Indian Institute of Technology, Delhi 110016 India http://www.cse.iitd.ac.in/~dheerajb 1 Outlines Basics of MPI How to compile and
Distributed Memory Programming with MPI
Distributed Memory Programming with MPI Moreno Marzolla Dip. di Informatica Scienza e Ingegneria (DISI) Università di Bologna moreno.marzolla@unibo.it Algoritmi Avanzati--modulo 2 2 Credits Peter Pacheco,
In the simplest sense, parallel computing is the simultaneous use of multiple computing resources to solve a problem.
1. Introduction to Parallel Processing In the simplest sense, parallel computing is the simultaneous use of multiple computing resources to solve a problem. a) Types of machines and computation. A conventional
MPI Message Passing Interface. Source:
MPI Message Passing Interface Source: http://www.netlib.org/utk/papers/mpi-book/mpi-book.html Message Passing Principles Explicit communication and synchronization Programming complexity is high But widely
Collective Communication: Gatherv. MPI v Operations. root
Collective Communication: Gather MPI v Operations A Gather operation has data from all processes collected, or gathered, at a central process, referred to as the root Even the root process contributes
NUMERICAL PARALLEL COMPUTING
Lecture 5, March 23, 2012: The Message Passing Interface http://people.inf.ethz.ch/iyves/pnc12/ Peter Arbenz, Andreas Adelmann Computer Science Dept, ETH Zürich E-mail: arbenz@inf.ethz.ch Paul Scherrer
Data parallelism. [ any app performing the *same* operation across a data stream ]
![Data parallelism. [ any app performing the *same* operation across a data stream ]](/thumbs/88/115717710.jpg "Data parallelism. [ any app performing the *same* operation across a data stream ]")
Data parallelism [ any app performing the *same* operation across a data stream ] Contrast stretching: Version Cores Time (secs) Speedup while (step < NumSteps &&!converged) { step++; diffs = 0; foreach
MPI - The Message Passing Interface
MPI - The Message Passing Interface The Message Passing Interface (MPI) was first standardized in 1994. De facto standard for distributed memory machines. All Top500 machines (http://www.top500.org) are
Review of MPI Part 2
Review of MPI Part Russian-German School on High Performance Computer Systems, June, 7 th until July, 6 th 005, Novosibirsk 3. Day, 9 th of June, 005 HLRS, University of Stuttgart Slide Chap. 5 Virtual
Topics. Lecture 6. Point-to-point Communication. Point-to-point Communication. Broadcast. Basic Point-to-point communication. MPI Programming (III)
Topics Lecture 6 MPI Programming (III) Point-to-point communication Basic point-to-point communication Non-blocking point-to-point communication Four modes of blocking communication Manager-Worker Programming
Advanced Parallel Programming
Advanced Parallel Programming Networks and All-to-All communication David Henty, Joachim Hein EPCC The University of Edinburgh Overview of this Lecture All-to-All communications MPI_Alltoall MPI_Alltoallv
Programming SoHPC Course June-July 2015 Vladimir Subotic MPI - Message Passing Interface
www.bsc.es Programming with Message-Passing Libraries SoHPC Course June-July 2015 Vladimir Subotic 1 Data Transfer Blocking: Function does not return, before message can be accessed again Process is blocked
CME 194 Introduc0on to MPI
CME 194 Introduc0on to MPI Essen0a Callidus h8p://cme194.stanford.edu Recap Last class: Communicators & Derived Datatypes Communica0on between arbitrary subsets of processes Grid style communica0on Communicate
Masterpraktikum - Scientific Computing, High Performance Computing
Masterpraktikum - Scientific Computing, High Performance Computing Message Passing Interface (MPI) Thomas Auckenthaler Wolfgang Eckhardt Technische Universität München, Germany Outline Hello World P2P
For developers. If you do need to have all processes write e.g. debug messages, you d then use channel 12 (see below).
For developers A. I/O channels in SELFE You need to exercise caution when dealing with parallel I/O especially for writing. For writing outputs, you d generally let only 1 process do the job, e.g. if(myrank==0)
Parallel Programming, MPI Lecture 2
Parallel Programming, MPI Lecture 2 Ehsan Nedaaee Oskoee 1 1 Department of Physics IASBS IPM Grid and HPC workshop IV, 2011 Outline 1 Introduction and Review The Von Neumann Computer Kinds of Parallel
Introduzione al Message Passing Interface (MPI) Andrea Clematis IMATI CNR
Introduzione al Message Passing Interface (MPI) Andrea Clematis IMATI CNR clematis@ge.imati.cnr.it Ack. & riferimenti An Introduction to MPI Parallel Programming with the Message Passing InterfaceWilliam
Message Passing Interface - MPI
Message Passing Interface - MPI Parallel and Distributed Computing Department of Computer Science and Engineering (DEI) Instituto Superior Técnico October 24, 2011 Many slides adapted from lectures by
UNIVERSITY OF MORATUWA
UNIVERSITY OF MORATUWA FACULTY OF ENGINEERING DEPARTMENT OF COMPUTER SCIENCE & ENGINEERING B.Sc. Engineering 2012 Intake Semester 8 Examination CS4532 CONCURRENT PROGRAMMING Time allowed: 2 Hours March
O.I. Streltsova, D.V. Podgainy, M.V. Bashashin, M.I.Zuev
High Performance Computing Technologies Lecture, Practical training 9 Parallel Computing with MPI: parallel algorithm for linear algebra https://indico-hlit.jinr.ru/event/120/ O.I. Streltsova, D.V. Podgainy,
AgentTeamwork Programming Manual
AgentTeamwork Programming Manual Munehiro Fukuda Miriam Wallace Computing and Software Systems, University of Washington, Bothell AgentTeamwork Programming Manual Table of Contents Table of Contents..2
Collective Communication: Gather. MPI - v Operations. Collective Communication: Gather. MPI_Gather. root WORKS A OK
Collective Communication: Gather MPI - v Operations A Gather operation has data from all processes collected, or gathered, at a central process, referred to as the root Even the root process contributes
MPI. What to Learn This Week? MPI Program Structure. What is MPI? This week, we will learn the basics of MPI programming.
What to Learn This Week? This week, we will learn the basics of MPI programming. MPI This will give you a taste of MPI, but it is far from comprehensive discussion. Again, the focus will be on MPI communications.
L19: Putting it together: N-body (Ch. 6)!
Administrative L19: Putting it together: N-body (Ch. 6)! November 22, 2011! Project sign off due today, about a third of you are done (will accept it tomorrow, otherwise 5% loss on project grade) Next
MPI - v Operations. Collective Communication: Gather
MPI - v Operations Based on notes by Dr. David Cronk Innovative Computing Lab University of Tennessee Cluster Computing 1 Collective Communication: Gather A Gather operation has data from all processes
Last Time. Intro to Parallel Algorithms. Parallel Search Parallel Sorting. Merge sort Sample sort
Intro to MPI Last Time Intro to Parallel Algorithms Parallel Search Parallel Sorting Merge sort Sample sort Today Network Topology Communication Primitives Message Passing Interface (MPI) Randomized Algorithms
Intermediate MPI features
Intermediate MPI features Advanced message passing Collective communication Topologies Group communication Forms of message passing (1) Communication modes: Standard: system decides whether message is
IPM Workshop on High Performance Computing (HPC08) IPM School of Physics Workshop on High Perfomance Computing/HPC08
IPM School of Physics Workshop on High Perfomance Computing/HPC08 16-21 February 2008 MPI tutorial Luca Heltai Stefano Cozzini Democritos/INFM + SISSA 1 When
MPI Programming. Henrik R. Nagel Scientific Computing IT Division
1 MPI Programming Henrik R. Nagel Scientific Computing IT Division 2 Outline Introduction Basic MPI programming Examples Finite Difference Method Finite Element Method LU Factorization Monte Carlo Method
Scientific Computing
Lecture on Scientific Computing Dr. Kersten Schmidt Lecture 21 Technische Universität Berlin Institut für Mathematik Wintersemester 2014/2015 Syllabus Linear Regression, Fast Fourier transform Modelling
MA471. Lecture 5. Collective MPI Communication
MA471 Lecture 5 Collective MPI Communication Today: When all the processes want to send, receive or both Excellent website for MPI command syntax available at: http://www-unix.mcs.anl.gov/mpi/www/ 9/10/2003
Programming Using the Message Passing Paradigm
Programming Using the Message Passing Paradigm Ananth Grama, Anshul Gupta, George Karypis, and Vipin Kumar To accompany the text ``Introduction to Parallel Computing'', Addison Wesley, 2003. Topic Overview
Intermediate MPI. M. D. Jones, Ph.D. Center for Computational Research University at Buffalo State University of New York
Intermediate MPI M. D. Jones, Ph.D. Center for Computational Research University at Buffalo State University of New York High Performance Computing I, 2008 M. D. Jones, Ph.D. (CCR/UB) Intermediate MPI
MPI 5. CSCI 4850/5850 High-Performance Computing Spring 2018
MPI 5 CSCI 4850/5850 High-Performance Computing Spring 2018 Tae-Hyuk (Ted) Ahn Department of Computer Science Program of Bioinformatics and Computational Biology Saint Louis University Learning Objectives
An Introduction to Parallel Programming
Guide 48 Version 2 An Introduction to Parallel Programming Document code: Guide 48 Title: An Introduction to Parallel Programming Version: 2 Date: 31/01/2011 Produced by: University of Durham Information
Lecture Topic: Multi-Core Processors: MPI 1.0 Overview (Part-II)
Multi-Core Processors : MPI 1.0 Overview Part-II 1 C-DAC Four Days Technology Workshop ON Hybrid Computing Coprocessors/Accelerators Power-Aware Computing Performance of Applications Kernels hypack-2013
Introduction to Parallel. Programming
University of Nizhni Novgorod Faculty of Computational Mathematics & Cybernetics Introduction to Parallel Section 4. Part 2. Programming Parallel Programming with MPI Gergel V.P., Professor, D.Sc., Software
Introduction to MPI, the Message Passing Library
Chapter 3, p. 1/57 Basics of Basic Messages -To-? Introduction to, the Message Passing Library School of Engineering Sciences Computations for Large-Scale Problems I Chapter 3, p. 2/57 Outline Basics of
The MPI Message-passing Standard Practical use and implementation (III) SPD Course 03/10/2010 Massimo Coppola
The MPI Message-passing Standard Practical use and implementation (III) SPD Course 03/10/2010 Massimo Coppola POINT-TO-POINT COMMUNICATION MODES SPD - MPI Standard Use and Implementation (3) 2 Buffered
Masterpraktikum - Scientific Computing, High Performance Computing
Masterpraktikum - Scientific Computing, High Performance Computing Message Passing Interface (MPI) and CG-method Michael Bader Alexander Heinecke Technische Universität München, Germany Outline MPI Hello
Parallel Processing WS 2017/18. Universität Siegen Tel.: 0271/ , Büro: H-B Stand: January 15, 2018
Parallel Processing WS 2017/18 Universität Siegen rolanda.dwismuellera@duni-siegena.de Tel.: 0271/740-4050, Büro: H-B 8404 Stand: January 15, 2018 Betriebssysteme / verteilte Systeme Parallel Processing
PROGRAMMING WITH MESSAGE PASSING INTERFACE. J. Keller Feb 26, 2018
PROGRAMMING WITH MESSAGE PASSING INTERFACE J. Keller Feb 26, 2018 Structure Message Passing Programs Basic Operations for Communication Message Passing Interface Standard First Examples Collective Communication
Lecture 7. Revisiting MPI performance & semantics Strategies for parallelizing an application Word Problems
Lecture 7 Revisiting MPI performance & semantics Strategies for parallelizing an application Word Problems Announcements Quiz #1 in section on Friday Midterm Room: SSB 106 Monday 10/30, 7:00 to 8:20 PM
Advanced MPI. Andrew Emerson
Advanced MPI Andrew Emerson (a.emerson@cineca.it) Agenda 1. One sided Communications (MPI-2) 2. Dynamic processes (MPI-2) 3. Profiling MPI and tracing 4. MPI-I/O 5. MPI-3 11/12/2015 Advanced MPI 2 One
CS 470 Spring Mike Lam, Professor. Distributed Programming & MPI
CS 470 Spring 2017 Mike Lam, Professor Distributed Programming & MPI MPI paradigm Single program, multiple data (SPMD) One program, multiple processes (ranks) Processes communicate via messages An MPI
Message Passing Programming with MPI. Message Passing Programming with MPI 1
Message Passing Programming with MPI Message Passing Programming with MPI 1 What is MPI? Message Passing Programming with MPI 2 MPI Forum First message-passing interface standard. Sixty people from forty
Message Passing with MPI Christian Iwainsky HiPerCH
Message Passing with MPI Christian Iwainsky HiPerCH 05.08.2013 FB. Computer Science Scientific Computing Christian Iwainsky 1 Agenda Recap MPI Part 1 Concepts Point-to-Point Basic Datatypes MPI Part 2
MPI Workshop - III. Research Staff Cartesian Topologies in MPI and Passing Structures in MPI Week 3 of 3
MPI Workshop - III Research Staff Cartesian Topologies in MPI and Passing Structures in MPI Week 3 of 3 Schedule 4Course Map 4Fix environments to run MPI codes 4CartesianTopology! MPI_Cart_create! MPI_
CS 470 Spring Mike Lam, Professor. Distributed Programming & MPI
CS 470 Spring 2018 Mike Lam, Professor Distributed Programming & MPI MPI paradigm Single program, multiple data (SPMD) One program, multiple processes (ranks) Processes communicate via messages An MPI
A message contains a number of elements of some particular datatype. MPI datatypes:
Messages Messages A message contains a number of elements of some particular datatype. MPI datatypes: Basic types. Derived types. Derived types can be built up from basic types. C types are different from
CEE 618 Scientific Parallel Computing (Lecture 5): Message-Passing Interface (MPI) advanced
1 / 32 CEE 618 Scientific Parallel Computing (Lecture 5): Message-Passing Interface (MPI) advanced Albert S. Kim Department of Civil and Environmental Engineering University of Hawai i at Manoa 2540 Dole
Intermediate MPI (Message-Passing Interface) 1/11
Intermediate MPI (Message-Passing Interface) 1/11 What happens when a process sends a message? Suppose process 0 wants to send a message to process 1. Three possibilities: Process 0 can stop and wait until
MPI MESSAGE PASSING INTERFACE
MPI MESSAGE PASSING INTERFACE David COLIGNON CÉCI - Consortium des Équipements de Calcul Intensif http://hpc.montefiore.ulg.ac.be Outline Introduction From serial source code to parallel execution MPI
Message Passing Interface
MPSoC Architectures MPI Alberto Bosio, Associate Professor UM Microelectronic Departement bosio@lirmm.fr Message Passing Interface API for distributed-memory programming parallel code that runs across
Intermediate MPI (Message-Passing Interface) 1/11
Intermediate MPI (Message-Passing Interface) 1/11 What happens when a process sends a message? Suppose process 0 wants to send a message to process 1. Three possibilities: Process 0 can stop and wait until
CSE 160 Lecture 23. Matrix Multiplication Continued Managing communicators Gather and Scatter (Collectives)
CS 160 Lecture 23 Matrix Multiplication Continued Managing communicators Gather and Scatter (Collectives) Today s lecture All to all communication Application to Parallel Sorting Blocking for cache 2013
Reusing this material
Messages Reusing this material This work is licensed under a Creative Commons Attribution- NonCommercial-ShareAlike 4.0 International License. http://creativecommons.org/licenses/by-nc-sa/4.0/deed.en_us
PARALLEL AND DISTRIBUTED COMPUTING
PARALLEL AND DISTRIBUTED COMPUTING 2013/2014 1 st Semester 1 st Exam January 7, 2014 Duration: 2h00 - No extra material allowed. This includes notes, scratch paper, calculator, etc. - Give your answers
Capstone Project. Project: Middleware for Cluster Computing
Capstone Project Project: Middleware for Cluster Computing Middleware is computer software that connects software components or applications. The software consists of a set of enabling services that allow