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1 Niclas Andersson
2 National Supercomputer entre NS is provider of leading edge supercomputing resources to NS partners SMHI and SAAB and to members of academic institution throughout Sweden. Independent organisation within Linköping University Staff: 17 people reated 1989 when LiU purchased a ray XMP Saab purchased a ray 1A The national science council bought 2000 PUhours/year for academic use.
3 Swedish National Infrastructure for omputing UPPMAX NS PD SUNET 10 Gb Backbone HP2N 3SE LUNAR
4 HP computing NS National Academic Resources Neolith, cluster w. IB (HP) Mozart, SMP Smokerings, cluster Weather Forecast Production (SMHI*) Bore (soon) cluster w. IB (HP) Blixt, cluster w. IB Bris, cluster w. SI Local Academic Resources Tornado, cluster w. IB Green, cluster Dayhoff. cluster Weather Model Development (SMHI*) Gimle (soon) cluster w. IB (HP) Dunder. cluster w. IB SAAB AB Darkstar, Maxwell, Hyperion, cluster Navier, Hooke, SMP *) SMHI = Swedish Meteorological and Hydrological Institute
5 HP storage resources Dedicated Disk Storage High Energy Physics Serenity (LH Tier-1), 56 TiB dache Tank (Iceube), 25 TiB dache limate Research D&T storage SMHI Tape Storage ommon for all resources Backup Hierarchical Storage IBM 3584 TSM/HSM urrently: 85 Mfiles, 240 TiB Research Projects XFS Archive
6 Network Infrastructure urrent: Only gigabit switches. LiU backbone is routing all NS traffic oming: Redundant router structure LAN connections to NS resources at SMHI. Direct connection from NS to LiU border router. Enable buildup of 10 Gb infrastructure
7 Neolith Largest academic HP resource in Sweden 60 TFlops peak, 44,5 TFlops Linpack, #23 on top500 omputing: 6440 cores in 805 D40g3 Intel Xeon lovertown, 2.33 GHz 725 with 16 GiB, 80 with 32 GiB, total 14 TiB Admin: 2 x DL380 Access: 3 x DL380 Network: Infiniband DDR, Full bisection + GigE + ILO Disk Storage: 8 x DL380 5 x Nexsan SataBeast (SATA) + 1 x IBM DS4700 (F) GPFS
8 Neolith onfiguration I/O, system and access servers ompute IPMI GigE I/O System Access 1 Gb 100 Mb 8 Gb 1 Gb Infiniband 16 Tb 20 Gb 805 compute servers D D D D D D D D SAN Switch 105 TB SATA + 7 TB F S S A A A
9 Neolith onfiguration Double Data Rate Infiniband Fat tree topology Full bisection bandwidth 3 ore switches (288 ports) Edge Edge swiches (24 ports) ore switch ore switch ore switch Gbit/s channel bandwidth 68 nodes Edge Edge Edge Switch 12 nodes
10 Bore / Gimle (to be installed soon) For national weather forecast production (Bore) and weather model development (Gimle) omputing: 1120 cores in 140 D60g5 Intel Xeon Harpertown, E5462 (2.8 GHz) 2.3 TiB memory Admin: 2 x DL380 Access: 2 x DL380 Network: Infiniband DDR, Full bisection + GigE + ILO Disk Storage (Bore): 3 x DL380 1 x Nexsan SataBeast XFS
11 Neolith onfiguration 2 x Intel Xeon lovertown Quadcore 64-bit architecture ompute server PIe DDR IB HA GigE IPMI GigE BM 2.33 GHz 4Flop/clock/core (using SSE3) 250 GB SATA 1333 Mhz MH Memory 16 GB (90%) 32 GB (10%) L2 cache Socket L2 cache Socke L2 cache t L2 cache ore ore ore ore ore ore ore ore
12 Neolith onfiguration System Software OS: Linux Distribution: entos File system: GPFS MPI: Scali MPI, OpenMPI, HPMPI with some ISVs ompilers: Intel, G, PGI Math lib: Intel MKL Job Mgmt/Scheduler: Slurm/Moab onf Mgmt: Systemimager, BitTorrent Full installation with each boot. Homegrown job start & compiler wrappers
13 Neolith current status Not entirely accepted yet Issues: Memory E errors Not all memory seen during POST MOS battery drainage Lacking tools to update BIOS settings remotely Users on half of the system
14
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