Installation of OpenFOAM into MAC

Size: px
Start display at page:

Download "Installation of OpenFOAM into MAC"

Transcription

1 Installation of OpenFOAM into MAC This tutorial explains how to install OpenFOAM into MacOS operating system. It is already tested under Mac OS Yosemite version and completed successfully. If you are running the Yosemite beta or DP, you cannot use the MacPorts DMG file, or the "sudo port -v selfupdate" command in the terminal. Therefore, you must first install a fresh copy of Xcode and MacPorts under Yosemite. It will then also allow you to update your ports as well. You can download Xcode and Macport easily by taking Apple Developer ID. NOTE: If you installed Xcode and Macports tools before you upgraded your MAC version, you have to uninstall and clean all dependencies and then install the new versions of Xcode and Macports again according to your new upgraded MAC version. To uninstall the Macports, and port functions, first uninstall all the installed ports by running this command in the Terminal: sudo port -fp uninstall installed To remove all remaining traces of MacPorts, run the following command in the Terminal. If you have changed prefix, applications_dir or frameworks_dir from their default values, then replace /opt/local with your prefix, replace /Applications/MacPorts with your applications_dir, and/or add your frameworks_dir to the list, respectively. sudo rm -rf \ /opt/local \ /Applications/DarwinPorts \ /Applications/MacPorts \ /Library/LaunchDaemons/org.macports.* \ /Library/Receipts/DarwinPorts*.pkg \ /Library/Receipts/MacPorts*.pkg \ /Library/StartupItems/DarwinPortsStartup \ /Library/Tcl/darwinports1.0 \ /Library/Tcl/macports1.0 \ ~/.macports Prepared by Baris BICER - SoftFlow Co., Ltd. 1

2 1. Then, go to following page and install last version of Xcode and Macport again: After the installation of Xcode you will use the license of the software. 2. Open the a new terminal window and run sudo xcodebuild license After this, you will be asked the administrator password input I agree with the input in view license the (English). 2.1 To check first whether you installed Xcode or not: xcode-select -p You should get reply such as: /Application/Xcode.app/Contents/Developer 2.2 Which version of Xcode do you use? To check it cd /usr/bin xcodebuild -version You should get reply such as: Xcode Build version 7A To check the CommandLineTools whether you installed or not xcode-select install ls /Library/Developer/ You should get reply such as: xcode-select: error: command line tools are already installed, use software Update to install updates CommandLineTools 3. After installation the Macports and Third Parties to update the information of the port. Open a terminal window sudo port selfupdate Prepared by Baris BICER - SoftFlow Co., Ltd. 2

3 You should get following message: ---> Updating MacPorts base sources using rsync MacPorts base version installed, MacPorts base version downloaded. ---> Updating the ports tree ---> MacPorts base is already the latest version The ports tree has been updated. To upgrade your installed ports, you should run port upgrade outdated 4. To upgrade already installed ports sudo port upgrade outdated You should get at the end such a reply: ----> No broken files found. 5. Install dependencies one by one 5.1.A: To install gcc49 version sudo port install gcc49 If you correctly installed the gcc49, you should get at the end such a reply: Password: ---> Computing dependencies for gcc49 ---> Cleaning gcc49 ---> Scanning binaries for linking errors ---> No broken files found 5.1.B: To set the gcc49 active you can run one of the following commands: sudo port select --set gcc mp-gcc49 (or) sudo port select gcc mp-gcc-49 You should get at the end such a reply: Selecting 'mp-gcc49' for 'gcc' succeeded. 'mp-gcc49' is now active. To check the gcc version (optional): gcc --version 5.2 Then install the OpenMPI Prepared by Baris BICER - SoftFlow Co., Ltd. 3

4 sudo port install openmpi-gcc49 If you correctly installed the openmpi-gcc49, you should get at the end such a reply: ---> Computing dependencies for openmpi-gcc49 ---> Cleaning openmpi-gcc49 ---> Scanning binaries for linking errors ---> No broken files found. sudo port select --set mpi openmpi-gcc49-fortran (to set the openmpi like mpi) You should get at the end such a reply: Selecting'openmpi-gcc49-fortran' for 'mpi' succeeded. 'openmpi-gcc49-fortran' is now active. 5.3 Also other dependencies can be installed one by one sudo port install cgal sudo port install ccache sudo port install flex sudo port install scotch sudo port install boost +openmpi sudo port install scotch -mpich +gcc49 +openmpi sudo port install metis +gcc For completeness sudo port select --set llvm mp-llvm-3.5 sudo port select --set python python27 sudo port select --set db db Before installing to check the dependencies run: port select --summary Prepared by Baris BICER - SoftFlow Co., Ltd. 4

5 6. To create a volume and mount it: hdiutil create -size 8.3g -type SPARSEBUNDLE -fs HFSX -volname OpenFOAM -fsargs -s OpenFOAM.sparsebundle mkdir -p OpenFOAM hdiutil attach -mountpoint $HOME/OpenFOAM OpenFOAM.sparsebundle cd OpenFOAM git clone cd OpenFOAM-2.3.x 6.1 To get the patch: M-2.3.x-Mac.patch Download the above file and place it in the OpenFOAM-2.3.x directory. 6.2 To apply patch: patch -p1<openfoam-2.3.x-mac.patch 6.3 To update the OpenFOAM-2.3.x/etc/bashrc (Append these lines to the /path/to/openfoam-2.3.x/etc/bashrc (change the "/path/to" to whatever your fully qualified path would be) echo "WM_CC=mpicc" >> /path/to/openfoam-2.3.x/etc/bashrc echo "WM_CXX=mpicxx" >> /path/to/openfoam-2.3.x/etc/bashrc 7. To install OpenFOAM run: source etc/bashrc && WM_NCOMPPROCS=$(sysctl -n hw.ncpu) =>if this doesn t work just run: source etc/bashrc Prepared by Baris BICER - SoftFlow Co., Ltd. 5

6 ./Allwmake > log.allwmake 2>&1 7.1 To update the bash profile (open a terminal window) and enter open ~/.bash_profile This will open the.bash_profile file in TextEdit(the default text editor included on your Mac). This file allows you to customize the environment your user runs in. 7.2 And add following lines into.bash_profile file: if [ -f $HOME/OpenFOAM/OpenFOAM-2.3.x/etc/bashrc ]; then. $HOME/OpenFOAM/OpenFOAM-2.3.x/etc/bashrc fi Force the.bash_profile to execute. This loads the values immediately without having to reboot. 7.3 To execute the bash_profile run the following command. source ~/.bash_profile This will load the openfoam bashrc file and setup your environment 7.4 You can confirm the new path by executing the following command: echo $PATH Now you will see the changes which you have made. 8. To install ParaView follow the following steps: 8.1 First install the Paraview for the Mac operation system from this page: Prepared by Baris BICER - SoftFlow Co., Ltd. 6

7 8.2 Then install it in a normal way. Then, the the resulting installation will provide the paraview binary at: /Applications/paraview.app/Contents/MacOS/paraview 8.3 Create a symbolic link to ParaView into your OpenFOAM installation, by running this command (adjust accordingly to your ParaView version): ln s /Applications/paraview.app/Contents/MacOS/paraview $WM_PROJECT_DIR/bin/paraview Note: $WM_PROJECT_DIR is where OpenFOAM is installed. 9. Edit the file ~/.alias (e. g. Text Wrangler, pico or nano); for example: nano ~/.alias If this requires root entry and gives error use (sudo s nano ~/.alias) 10. And add the following lines into alias file: alias parax="touch case.foam && paraview --data=case.foam &" alias parafoam="parafoam -builtin" 11. After that open new terminal and run:. ~/.alias 12. After that it is ready to use it. Whenever you need to run parafoam, you can run either one of the following commands parax parafoam It is ready to try it in your case Good luck!!! Prepared by Baris BICER - SoftFlow Co., Ltd. 7

Software Installations

Software Installations Software Installations Command-line Method Tuesday, August 09, 2011 Command-line Installation of Applications It is possible to install a.app,.dmg or.pkg file from the command line in a terminal window.

More information

Source pack installa0on of OpenFOAM. 4.0 into RHL. Open CAE Local Study Mee0ng Y. Takagi July 2, 2016

Source pack installa0on of OpenFOAM. 4.0 into RHL. Open CAE Local Study Mee0ng Y. Takagi July 2, 2016 Source pack installa0on of OpenFOAM. 4.0 into RHL Open CAE Local Study Mee0ng Y. Takagi July 2, 2016 Download the packages from the official website Where should we install? If you have a machine only

More information

Introductory OpenFOAM Course From 2 nd to 6 th July, Joel Guerrero University of Genoa, DICAT

Introductory OpenFOAM Course From 2 nd to 6 th July, Joel Guerrero University of Genoa, DICAT Introductory OpenFOAM Course From 2 nd to 6 th July, 2012 Joel Guerrero University of Genoa, DICAT Dipartimento di Ingegneria delle Costruzioni, dell'ambiente e del Territorio Your Lecturer Joel GUERRERO

More information

PL-2303 USB-to-Serial Bridge Controller Mac OS X Universal Binary Driver Installation Guide

PL-2303 USB-to-Serial Bridge Controller Mac OS X Universal Binary Driver Installation Guide PL-2303 USB-to-Serial Bridge Controller Mac OS X Universal Binary Driver Installation Guide Introduction This installation guide document shows the procedure for installing the MacOS X driver for Prolific

More information

How to get started with OpenFOAM at SHARCNET

How to get started with OpenFOAM at SHARCNET How to get started with OpenFOAM at SHARCNET, High Performance Technical Consultant SHARCNET, York University isaac@sharcnet.ca Outlines Introduction to OpenFOAM Compilation in SHARCNET Pre/Post-Processing

More information

swiftenv Documentation

swiftenv Documentation swiftenv Documentation Release 1.3.0 Kyle Fuller Sep 27, 2017 Contents 1 The User Guide 3 1.1 Installation................................................ 3 1.2 Getting Started..............................................

More information

Porting OpenFOAM to Mac OS X

Porting OpenFOAM to Mac OS X Bernhard F.W. Gschaider 1 Hrvoje Jasak 2 1 ICE Strömungsforschung 2 Wikki Ltd June 9, 2007 Outline Basics 1 Basics It s only UNIX (but I like it) Vendor provided software 2 Preparing the port Additional

More information

PL-2303 USB-to-Serial Bridge Controller Mac OS X Universal Binary Driver Installation Guide (for Mac OS X 10.9, 10.10, 10.11, 10.

PL-2303 USB-to-Serial Bridge Controller Mac OS X Universal Binary Driver Installation Guide (for Mac OS X 10.9, 10.10, 10.11, 10. PL-2303 USB-to-Serial Bridge Controller Mac OS X Universal Binary Driver Installation Guide (for Mac OS X 10.9, 10.10, 10.11, 10.12) Introduction This installation guide document shows the procedure for

More information

SortMeRNA User Manual

SortMeRNA User Manual SortMeRNA User Manual Evguenia Kopylova evguenia.kopylova@lifl.fr January 2013 1 Contents 1 Introduction 3 2 Installation 3 2.1 Required g++ compiler version............................... 3 2.1.1 Ubuntu

More information

Installing CEA on an Intel Mac

Installing CEA on an Intel Mac Installing CEA on an Intel Mac Jonah Zimmerman April 20, 2012 1 Introduction Chemical Equilibrium with Applications (CEA) is a computer program published by NASA Glenn with the purpose of calculating chemical

More information

Open Source Computational Fluid Dynamics

Open Source Computational Fluid Dynamics Open Source Computational Fluid Dynamics An MSc course to gain extended knowledge in Computational Fluid Dynamics (CFD) using open source software. Teachers: Miklós Balogh and Zoltán Hernádi Department

More information

OpenFOAM structure: Linux environment, user environment variables, directory and file structure, units, etc.

OpenFOAM structure: Linux environment, user environment variables, directory and file structure, units, etc. OpenFOAM structure: Linux environment, user environment variables, directory and file structure, units, etc. Eric Paterson egp@vt.edu Kevin T. Crofton Department of Aerospace and Ocean Engineering Virginia

More information

Environment Variables

Environment Variables Environment Variables 1 A shell is simply a program that supplies certain services to users. As such, a shell may take parameters whose values modify or define certain behaviors. These parameters (or shell

More information

COPYRIGHTED MATERIAL. Installing Xcode. The Xcode Installer

COPYRIGHTED MATERIAL. Installing Xcode. The Xcode Installer 1 Installing Xcode Xcode is part of the Xcode Developer Tools suite developed and distributed by Apple Computer. If you haven t installed it already, read this chapter to find out how to do so. If the

More information

LetItB Installation Manual. Okinawa Institute of Science and Technology Neural Computation Unit

LetItB Installation Manual. Okinawa Institute of Science and Technology Neural Computation Unit Okinawa Institute of Science and Technology Neural Computation Unit Version 1 Dated April 21, 2008 Contents 1. Introduction...3 2. Installation Instructions for Linux and Mac OS...4 3. Xerces-C Library

More information

Git Command Line Tool Is Not Installed

Git Command Line Tool Is Not Installed Git Command Line Tool Is Not Installed Make Sure It Is Accessible On Y Error: "git" command line tool is not installed: make sure it is accessible on y I have installed git tool. even in git bash its showing

More information

Installing CEA on an Intel Mac

Installing CEA on an Intel Mac Installing CEA on an Intel Mac Jonah Zimmerman April 20, 2012 1 Introduction Chemical Equilibrium with Applications (CEA) is a computer program published by NASA Glenn with the purpose of calculating chemical

More information

Chapter 4. Unix Tutorial. Unix Shell

Chapter 4. Unix Tutorial. Unix Shell Chapter 4 Unix Tutorial Users and applications interact with hardware through an operating system (OS). Unix is a very basic operating system in that it has just the essentials. Many operating systems,

More information

LING 408/508: Computational Techniques for Linguists. Lecture 5

LING 408/508: Computational Techniques for Linguists. Lecture 5 LING 408/508: Computational Techniques for Linguists Lecture 5 Last Time Installing Ubuntu 18.04 LTS on top of VirtualBox Your Homework 2: did everyone succeed? Ubuntu VirtualBox Host OS: MacOS or Windows

More information

Manual Update Java Mac Os X Developer Package

Manual Update Java Mac Os X Developer Package Manual Update Java Mac Os X 10.7 5 Developer Package The OS X Lion v10.7.5 Update is recommended for all OS X Lion users and includes general operating system fixes that improve the stability, compatibility,

More information

Linux Command Line Primer. By: Scott Marshall

Linux Command Line Primer. By: Scott Marshall Linux Command Line Primer By: Scott Marshall Draft: 10/21/2007 Table of Contents Topic Page(s) Preface 1 General Filesystem Background Information 2 General Filesystem Commands 2 Working with Files and

More information

manifold Documentation

manifold Documentation manifold Documentation Release 0.0.1 Open Source Robotics Foundation Mar 04, 2017 Contents 1 What is Manifold? 3 2 Installation 5 2.1 Ubuntu Linux............................................... 5 2.2

More information

Linux Kung Fu. Ross Ventresca UBNetDef, Fall 2017

Linux Kung Fu. Ross Ventresca UBNetDef, Fall 2017 Linux Kung Fu Ross Ventresca UBNetDef, Fall 2017 GOTO: https://apps.ubnetdef.org/ What is Linux? Linux generally refers to a group of Unix-like free and open source operating system distributions built

More information

Environment Variables

Environment Variables Environment Variables 1 A shell is simply a program that supplies certain services to users. As such, a shell may take parameters whose values modify or define certain behaviors. These parameters (or shell

More information

CS 261 Recitation 1 Compiling C on UNIX

CS 261 Recitation 1 Compiling C on UNIX Oregon State University School of Electrical Engineering and Computer Science CS 261 Recitation 1 Compiling C on UNIX Winter 2017 Outline Secure Shell Basic UNIX commands Editing text The GNU Compiler

More information

How To Uninstall Programs On Mac Os X Snow Leopard Without Disc

How To Uninstall Programs On Mac Os X Snow Leopard Without Disc How To Uninstall Programs On Mac Os X Snow Leopard Without Disc Install Snow Leopard while keeping files, applications, and settings. If you follow When the Mac OS X installation finishes with the disc,

More information

Zephyr Kernel Installation & Setup Manual

Zephyr Kernel Installation & Setup Manual Zephyr Kernel Installation & Setup Manual Zephyr kernel is a small footprint Single address space OS, i.e, it combines application specific code with a custom kernel to create a monolithic image that gets

More information

Salesforce DX Setup Guide

Salesforce DX Setup Guide Salesforce DX Setup Guide Version 42.0, Spring 18 @salesforcedocs Last updated: April 24, 2018 Copyright 2000 2018 salesforce.com, inc. All rights reserved. Salesforce is a registered trademark of salesforce.com,

More information

R Mac Setup. Chong Xing 1,2 & Paul Johnson 1,3

R Mac Setup. Chong Xing 1,2 & Paul Johnson 1,3 R Mac Setup Chong Xing 1,2 & Paul Johnson 1,3 1 Center for Research Methods and Data Analysis 2 Department of Communication Studies 3 Department of Political Science 2018 Chong Xing & Paul Johnson (CRMDA)

More information

Supercomputing environment TMA4280 Introduction to Supercomputing

Supercomputing environment TMA4280 Introduction to Supercomputing Supercomputing environment TMA4280 Introduction to Supercomputing NTNU, IMF February 21. 2018 1 Supercomputing environment Supercomputers use UNIX-type operating systems. Predominantly Linux. Using a shell

More information

USB to Serial Adapter Driver Installation Manual

USB to Serial Adapter Driver Installation Manual USB to Serial Adapter Driver Installation Manual For Windows 98 / ME / 2000 / XP / Vista / 7/ 8 / Mac Contents Introduction Features & Specifications System Requirements Installing the Device Uninstalling

More information

ATSC595 Air Pollution Modelling HYSPLIT Model Quick Guide- OSX, Linux Feb M. Fung

ATSC595 Air Pollution Modelling HYSPLIT Model Quick Guide- OSX, Linux Feb M. Fung ATSC595 Air Pollution Modelling HYSPLIT Model Quick Guide- OSX, Linux Feb. 2016 M. Fung The NOAA Air research lab HYSPLIT model comes both in executable form, as well as source code form depending on the

More information

Introduction to Linux

Introduction to Linux Introduction to Linux January 2011 Don Bahls User Consultant (Group Leader) bahls@arsc.edu (907) 450-8674 Overview The shell Common Commands File System Organization Permissions Environment Variables I/O

More information

Mac Os X Single User Mode Mount Usb Drive

Mac Os X Single User Mode Mount Usb Drive Mac Os X Single User Mode Mount Usb Drive Changing Hard Drive Name in Single User Mode - Mac OSX Mavericks. No problem. How do I change my hard drives names through the single user mode? I've never used

More information

OpenFOAM directory organization

OpenFOAM directory organization OpenFOAM directory organization Håkan Nilsson, Chalmers / Mechanics and Maritime Sciences / Fluid Dynamics 1 Prerequisites OpenFOAM directory organization You know how to use OpenFOAM, and how to find

More information

CS 143A. Principles of Operating Systems. Instructor : Prof. Anton Burtsev

CS 143A. Principles of Operating Systems. Instructor : Prof. Anton Burtsev CS 143A Principles of Operating Systems Instructor : Prof. Anton Burtsev (aburtsev@uci.edu) Assistants : Junjie Shen junjies1@uci.edu Vikram Narayanan narayav1@uci.edu Biswadip Maity (Deep) Email : maityb@uci.edu

More information

1 of 5 3/28/2010 8:04 AM XCode Notes Home Class Info Links Lectures Newsgroup Assignmen Xcode is a free integrated development environment (IDE) for C, C++, Java and other languages on MacOS X. It comes

More information

Definition Center Installation for Linux

Definition Center Installation for Linux Definition Center 10.2.0 - Installation for Linux These are instructions to install, configure, upgrade, start, stop and uninstall Definition Center 10.2.0 (DC) on a Linux system. In this installation,

More information

More Raspian. An editor Configuration files Shell scripts Shell variables System admin

More Raspian. An editor Configuration files Shell scripts Shell variables System admin More Raspian An editor Configuration files Shell scripts Shell variables System admin Nano, a simple editor Nano does not require the mouse. You must use your keyboard to move around the file and make

More information

Scanner Driver for Ubuntu

Scanner Driver for Ubuntu Scanner Driver for Ubuntu If you install this scanner driver, you can scan with SANE (Scanner Access Now Easy) compliant applications (Pull Scan) and scan by using the operation panel of the device (Push

More information

INSTALLATION GUIDE. CalculiX Graphical Pre- and Postprocessor cgx 2.9 on Mac OS X El Capitan. 1 B. Graf

INSTALLATION GUIDE. CalculiX Graphical Pre- and Postprocessor cgx 2.9 on Mac OS X El Capitan. 1 B. Graf CalculiX cgx INSTALLATION GUIDE CalculiX Graphical Pre- and Postprocessor cgx 2.9 on Mac OS X El Capitan 1 B. Graf Abstract. CalculiX comprises the graphical pre- and postprocessor cgx (CalculiX GraphiX)

More information

Php Scripts If Then Else Linux Bash Shell

Php Scripts If Then Else Linux Bash Shell Php Scripts If Then Else Linux Bash Shell I am using awk as part of and if then else statement. KSH, CSH, SH, BASH, PERL, PHP, SED, AWK and shell scripts and shell scripting languages here. I just wrote

More information

Linux Training. for New Users of Cluster. Georgia Advanced Computing Resource Center University of Georgia Suchitra Pakala

Linux Training. for New Users of Cluster. Georgia Advanced Computing Resource Center University of Georgia Suchitra Pakala Linux Training for New Users of Cluster Georgia Advanced Computing Resource Center University of Georgia Suchitra Pakala pakala@uga.edu 1 Overview GACRC Linux Operating System Shell, Filesystem, and Common

More information

Linux Software Installation Exercises 2 Part 1. Install PYTHON software with PIP

Linux Software Installation Exercises 2 Part 1. Install PYTHON software with PIP Linux Software Installation Exercises 2 Part 1. Install PYTHON software with PIP 1.1 Login to the BioHPC machine and install deeptools; Login (ssh) to the machine that you are assigned for this workshop

More information

The distcc Utility for Remote Compiling

The distcc Utility for Remote Compiling The distcc Utility for Remote Compiling Fall 2017 Department of Mechanical Engineering, CSAIL MIT, Cambridge MA 02139 1 The distcc Utility for Remote Compiling 1 1.1 Raspberry Pi Setup.........................................

More information

Zend Server Community Edition 5.1. Installation Guide. By Zend Technologies.

Zend Server Community Edition 5.1. Installation Guide. By Zend Technologies. Zend Server Community Edition 5.1 Installation Guide By Zend Technologies www.zend.com Abstract This is the Install Guide for Zend Server Community Edition Version 5.1. The information in this document

More information

Install your scientific software stack easily with Spack

Install your scientific software stack easily with Spack Install your scientific software stack easily with Spack Les mardis du développement technologique Florent Pruvost (SED) Outline 1. Context 2. Features overview 3. In practice 4. Some feedback Florent

More information

Printing using the wireless network macos

Printing using the wireless network macos Wireless network instructions Printing using the wireless network macos Note: This guide is for Mac OS X wireless printing on the UoA-WiFi network using built-in Airport card and Safari. Connecting to

More information

Using the computational resources at the GACRC

Using the computational resources at the GACRC An introduction to zcluster Georgia Advanced Computing Resource Center (GACRC) University of Georgia Dr. Landau s PHYS4601/6601 course - Spring 2017 What is GACRC? Georgia Advanced Computing Resource Center

More information

ENCM 339 Fall 2017: Editing and Running Programs in the Lab

ENCM 339 Fall 2017: Editing and Running Programs in the Lab page 1 of 8 ENCM 339 Fall 2017: Editing and Running Programs in the Lab Steve Norman Department of Electrical & Computer Engineering University of Calgary September 2017 Introduction This document is a

More information

Installation Guide for Macintosh August 2018

Installation Guide for Macintosh August 2018 Installation Guide for Macintosh August 2018 Welcome to Kite Student Portal Software for Macintosh Computers Note: The Kite Student Portal software is supported for 64-bit Macintosh computers. If your

More information

Future Technology Devices International Ltd. Mac OS X Installation Guide

Future Technology Devices International Ltd. Mac OS X Installation Guide Future Technology Devices International Ltd. Mac OS X Installation Guide I Mac OS X Installation Guide Table of Contents Part I Welcome to the Mac OS X Installation Guide 2 Part II Installing FTDIUSBSerialDriver

More information

Using Doxygen to Create Xcode Documentation Sets

Using Doxygen to Create Xcode Documentation Sets Using Doxygen to Create Xcode Documentation Sets Documentation sets (doc sets) provide a convenient way for an Xcode developer to search API and conceptual documentation (including guides, tutorials, TechNotes,

More information

Unix. Examples: OS X and Ubuntu

Unix. Examples: OS X and Ubuntu The Command Line A terminal is at the end of an electric wire, a shell is the home of a turtle, tty is a strange abbreviation, and a console is a kind of cabinet. - Some person on SO Learning Resources

More information

If you had a freshly generated image from an LCI instructor, make sure to set the hostnames again:

If you had a freshly generated image from an LCI instructor, make sure to set the hostnames again: Storage Node Setup A storage node (or system as your scale) is a very important unit for an HPC cluster. The computation is often about the data it produces and keeping that data safe is important. Safe

More information

FOR518 Laptop Setup (Pre-class)

FOR518 Laptop Setup (Pre-class) FOR518 Laptop Setup (Pre-class) Objectives Install required software for FOR518 Mac and ios Forensic Analysis and Incident Response Class Preparation Please ensure you are running macos 10.13 or newer.

More information

CSE 391 Lecture 3. bash shell continued: processes; multi-user systems; remote login; editors

CSE 391 Lecture 3. bash shell continued: processes; multi-user systems; remote login; editors CSE 391 Lecture 3 bash shell continued: processes; multi-user systems; remote login; editors slides created by Marty Stepp, modified by Jessica Miller and Ruth Anderson http://www.cs.washington.edu/391/

More information

Building MPI so we can run code on multiple nodes

Building MPI so we can run code on multiple nodes 1 of 8 22.02.2013 13:16 Return to h p://www.soton.ac.uk/~sjc/raspberrypi View video at: h p://www.youtube.com/watch?v=jq5nrhz9i94 Steps to make Raspberry Pi Supercomputer Prof Simon Cox Computa onal Engineering

More information

Introduction to UNIX I: Command Line 1 / 21

Introduction to UNIX I: Command Line 1 / 21 Introduction to UNIX I: Command Line 1 / 21 UNIX Command line The UNIX Shell: command line interface Navigating Directories and Files Running applications Reminder about helpful tutorial: http://korflab.ucdavis.edu/unix_and_perl/current.html

More information

Database Backup Restore

Database Backup Restore The following describes how to restore the controller database after a failed upgrade, and reinstall the upgrade., page 1 If a controller upgrade fails, you can uninstall the upgrade, restore the controller

More information

Linux Bootcamp Fall 2015

Linux Bootcamp Fall 2015 Linux Bootcamp Fall 2015 UWB CSS Based on: http://swcarpentry.github.io/shell-novice "Software Carpentry" and the Software Carpentry logo are registered trademarks of NumFOCUS. What this bootcamp is: A

More information

UNIX COMMANDS AND SHELLS. UNIX Programming 2015 Fall by Euiseong Seo

UNIX COMMANDS AND SHELLS. UNIX Programming 2015 Fall by Euiseong Seo UNIX COMMANDS AND SHELLS UNIX Programming 2015 Fall by Euiseong Seo What is a Shell? A system program that allows a user to execute Shell functions (internal commands) Other programs (external commands)

More information

Introduction to the SHARCNET Environment May-25 Pre-(summer)school webinar Speaker: Alex Razoumov University of Ontario Institute of Technology

Introduction to the SHARCNET Environment May-25 Pre-(summer)school webinar Speaker: Alex Razoumov University of Ontario Institute of Technology Introduction to the SHARCNET Environment 2010-May-25 Pre-(summer)school webinar Speaker: Alex Razoumov University of Ontario Institute of Technology available hardware and software resources our web portal

More information

Jabra Suite for Mac - Mass Deployment guide Revision 1 /

Jabra Suite for Mac - Mass Deployment guide Revision 1 / Jabra Suite for Mac - Mass Deployment guide Revision 1 / 2012-12-11 Introduction This guide explains how to customize the Jabra Suite for Mac package and deploy it in an enterprise environment. Some sections

More information

A Brief Introduction to Unix

A Brief Introduction to Unix A Brief Introduction to Unix Sean Barag Drexel University March 30, 2011 Sean Barag (Drexel University) CS 265 - A Brief Introduction to Unix March 30, 2011 1 / 17 Outline 1 Directories

More information

coxtactoe Documentation

coxtactoe Documentation coxtactoe Documentation Release 0.1.0 Brett Anderson July 13, 2014 Contents 1 Contents 1 1.1 Pre-requisites............................................... 1 1.2 Installation & Configuration.......................................

More information

Notes for installing a local blast+ instance of NCBI BLAST F. J. Pineda 09/25/2017

Notes for installing a local blast+ instance of NCBI BLAST F. J. Pineda 09/25/2017 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 31 32 33 34 35 36 37 38 39 40 41 42 43 44 45 Notes for installing a local blast+ instance of NCBI BLAST F. J. Pineda 09/25/2017

More information

Mac Os X Manually Mount Usb Drive Command Line

Mac Os X Manually Mount Usb Drive Command Line Mac Os X Manually Mount Usb Drive Command Line Connect the USB drive to the Mac and launch Disk Utility, then select that USB drive behavior for the command line), then hit the RETURN key to start making

More information

Parallel Programming Pre-Assignment. Setting up the Software Environment

Parallel Programming Pre-Assignment. Setting up the Software Environment Parallel Programming Pre-Assignment Setting up the Software Environment Authors: B. Wilkinson and C. Ferner. Modification date: Aug 21, 2014 (Minor correction Aug 27, 2014.) Software The purpose of this

More information

Quick tutorial for almabte

Quick tutorial for almabte Quick tutorial for almabte almabte consists of a library and a collection of executables allowing the user to calculate thermal transport properties of heterogeneous structures, using only ab-initio data,

More information

How to Dual-Boot OS X and Ubuntu

How to Dual-Boot OS X and Ubuntu How to Dual-Boot OS X and Ubuntu Nailen Matschke - nailen@caltech.edu 10/3/2015 What you need: 1. A USB drive with at least 2 GB of space, that you don t mind wiping 2. A copy of Ubuntu (available here),

More information

Version Control with Git

Version Control with Git Version Control with Git Methods & Tools for Software Engineering (MTSE) Fall 2017 Prof. Arie Gurfinkel based on https://git-scm.com/book What is Version (Revision) Control A system for managing changes

More information

Platform Migrator Technical Report TR

Platform Migrator Technical Report TR Platform Migrator Technical Report TR2018-990 Munir Contractor mmc691@nyu.edu Christophe Pradal christophe.pradal@inria.fr Dennis Shasha shasha@cs.nyu.edu May 12, 2018 CONTENTS: 1 Abstract 4 2 Platform

More information

SGI OpenFOAM TM Quick Start Guide

SGI OpenFOAM TM Quick Start Guide SGI OpenFOAM TM Quick Start Guide 007 5817 001 COPYRIGHT 2012, SGI. All rights reserved; provided portions may be copyright in third parties, as indicated elsewhere herein. No permission is granted to

More information

Manual Java Install Mac Os X Mountain Lion From Usb On Pc

Manual Java Install Mac Os X Mountain Lion From Usb On Pc Manual Java Install Mac Os X Mountain Lion From Usb On Pc Java is outdated in terms of security in Mac OS X 10.6. unless you have the USB Flash drive for it, and Mountain Lion and Mavericks requires a

More information

Modules and Software. Daniel Caunt Harvard FAS Research Computing

Modules and Software. Daniel Caunt Harvard FAS Research Computing Modules and Software Daniel Caunt Harvard FAS Research Computing 1 What is Research Computing? Faculty of Arts and Sciences (FAS) department that handles non-enterprise IT requests from researchers. (Contact

More information

Tizen TCT User Guide

Tizen TCT User Guide Tizen 2.3.1 TCT User Guide Table of Contents 1. Environment setup... 3 1.1. Symbols and abbreviations... 3 1.2. Hardware Requirements... 3 1.3. Software Requirements... 3 2. Getting TCT-source and TCT-manager...

More information

About Xcode and iphone SDK

About Xcode and iphone SDK apple About Xcode and iphone SDK iphone SDK and Xcode 3.1.2 developer tools for iphone OS 2.2 Contents Introduction Compatibility with Mac OS X Versions What's New Installation Deprecation Notice Introduction

More information

Precursor Steps & Storage Node

Precursor Steps & Storage Node Precursor Steps & Storage Node In a basic HPC cluster, the head node is the orchestration unit and possibly the login portal for your end users. It s one of the most essential pieces to get working appropriately.

More information

Getting Started With Cpsc (Advanced) Hosted by Jarrett Spiker

Getting Started With Cpsc (Advanced) Hosted by Jarrett Spiker Getting Started With Cpsc (Advanced) Hosted by Jarrett Spiker Advanced? - Assuming that everyone has done at least a year of CPSC already, or has a strong base knowledge. - If not, there is a Beginners

More information

a. puppet should point to master (i.e., append puppet to line with master in it. Use a text editor like Vim.

a. puppet should point to master (i.e., append puppet to line with master in it. Use a text editor like Vim. Head Node Make sure that you have completed the section on Precursor Steps and Storage. Key parts of that are necessary for you to continue on this. If you have issues, please let an instructor know to

More information

Engineering Robust Server Software

Engineering Robust Server Software Engineering Robust Server Software Containers Isolation Isolation: keep different programs separate Good for security Might also consider performance isolation Also has security implications (side channel

More information

Software Preparation for Modelling Workshop

Software Preparation for Modelling Workshop Software Preparation for Modelling Workshop Daniel Brown, Andreas Freise University of Birmingham Issue: Date: July 27, 2017 School of Physics and Astronomy University of Birmingham Birmingham, B15 2TT

More information

Configure Error No Acceptable C Compiler Found In Xcode Installed

Configure Error No Acceptable C Compiler Found In Xcode Installed Configure Error No Acceptable C Compiler Found In Xcode Installed Xcode and command line tool are installed. It was created by Sage configure 6.6.rc3, which was generated by GNU Autoconf 2.69. Why do I

More information

E. Annex. Rules and conventions used for the project. v The µkos package

E. Annex. Rules and conventions used for the project. v The µkos package v 13.28 E.1. Rules and conventions used for the project E. Annex In order to have and to maintain a coherency along all the µkos project, the following rules for writing software have been used. NULL =

More information

Working with Basic Linux. Daniel Balagué

Working with Basic Linux. Daniel Balagué Working with Basic Linux Daniel Balagué How Linux Works? Everything in Linux is either a file or a process. A process is an executing program identified with a PID number. It runs in short or long duration

More information

Salesforce DX Setup Guide

Salesforce DX Setup Guide Salesforce DX Setup Guide Version 44.0, Winter 19 @salesforcedocs Last updated: September 6, 2018 Copyright 2000 2018 salesforce.com, inc. All rights reserved. Salesforce is a registered trademark of salesforce.com,

More information

Linux for Beginners. Windows users should download putty or bitvise:

Linux for Beginners. Windows users should download putty or bitvise: Linux for Beginners Windows users should download putty or bitvise: https://putty.org/ Brief History UNIX (1969) written in PDP-7 assembly, not portable, and designed for programmers as a reaction by Bell

More information

EECS Software Tools. Lab 2 Tutorial: Introduction to UNIX/Linux. Tilemachos Pechlivanoglou

EECS Software Tools. Lab 2 Tutorial: Introduction to UNIX/Linux. Tilemachos Pechlivanoglou EECS 2031 - Software Tools Lab 2 Tutorial: Introduction to UNIX/Linux Tilemachos Pechlivanoglou (tipech@eecs.yorku.ca) Sep 22 & 25, 2017 Material marked with will be in your exams Sep 22 & 25, 2017 Introduction

More information

Basic UNIX commands. HORT Lab 2 Instructor: Kranthi Varala

Basic UNIX commands. HORT Lab 2 Instructor: Kranthi Varala Basic UNIX commands HORT 59000 Lab 2 Instructor: Kranthi Varala Client/Server architecture User1 User2 User3 Server (UNIX/ Web/ Database etc..) User4 High Performance Compute (HPC) cluster User1 Compute

More information

Setting up Python 3.5, numpy, and matplotlib on your Macintosh or Linux computer

Setting up Python 3.5, numpy, and matplotlib on your Macintosh or Linux computer CS-1004, Introduction to Programming for Non-Majors, C-Term 2017 Setting up Python 3.5, numpy, and matplotlib on your Macintosh or Linux computer Hugh C. Lauer Adjunct Professor Worcester Polytechnic Institute

More information

IoT with Intel Galileo Gerardo Carmona. makerobots.tk

IoT with Intel Galileo Gerardo Carmona. makerobots.tk IoT with Intel Galileo Gerardo Carmona Outline What is Intel Galileo? Hello world! In Arduino Arduino and Linux Linux via SSH Playing around in Linux Programming flexibility How GPIOs works Challenge 1:

More information

Oracle Communication Policy Controller. Lab Environment Preparation

Oracle Communication Policy Controller. Lab Environment Preparation Oracle Communication Policy Controller Edition 1.0 April 2013 Copyright 2013, Oracle and/or its affiliates. All rights reserved. Disclaimer This document contains proprietary information and is protected

More information

CSE 303 Lecture 4. users/groups; permissions; intro to shell scripting. read Linux Pocket Guide pp , 25-27, 61-65, , 176

CSE 303 Lecture 4. users/groups; permissions; intro to shell scripting. read Linux Pocket Guide pp , 25-27, 61-65, , 176 CSE 303 Lecture 4 users/groups; permissions; intro to shell scripting read Linux Pocket Guide pp. 19-20, 25-27, 61-65, 118-119, 176 slides created by Marty Stepp http://www.cs.washington.edu/303/ 1 Lecture

More information

Logging In to Mac OS X Using a HyperFIDO U2F Security Key

Logging In to Mac OS X Using a HyperFIDO U2F Security Key Logging In to Mac OS X Using a HyperFIDO U2F Security Key 9/27/2017 HSTE-NB0033.5-RV 1.0 HYPERSECU INFORMATION SYSTEMS INC #200-6191 Westminster Hwy, Richmond, BC V7C 4V4 Canada 1 (604) 297-2000 hypersecu.com

More information

Installing Mac OS printer driver for myprint

Installing Mac OS printer driver for myprint Installing Mac OS printer driver for myprint Table of Contents 1 Introduction...1 2 Downloading the MP C3502 Postscript driver for Mac...2 3 Configuring CUPS...6 4 Adding an IPP printer...8 5 Configuring

More information

Unix Workshop Aug 2014

Unix Workshop Aug 2014 Unix Workshop 2014 5 Aug 2014 What is Unix Multitasking, multiuser operating system Often the OS of choice for large servers, large clusters Unix Around You You re probably familiar with these: Linux Solaris

More information

Mac Os X Terminal User Guide

Mac Os X Terminal User Guide Mac Os X Terminal User Guide 10.7.4 First Mac OS X is Unix based so any book on the bash shell will be helpful. There are some differences between the Mac and older Unix systems. One I know is the default

More information

EE516: Embedded Software Project 1. Setting Up Environment for Projects

EE516: Embedded Software Project 1. Setting Up Environment for Projects EE516: Embedded Software Project 1. Setting Up Environment for Projects By Dong Jae Shin 2015. 09. 01. Contents Introduction to Projects of EE516 Tasks Setting Up Environment Virtual Machine Environment

More information

The build2 Toolchain Installation and Upgrade

The build2 Toolchain Installation and Upgrade The build2 Toolchain Installation and Upgrade Copyright 2014-2019 Code Synthesis Ltd Permission is granted to copy, distribute and/or modify this document under the terms of the MIT License This revision

More information