Is deformable image registration a solved problem?
|
|
- Roger Flowers
- 5 years ago
- Views:
Transcription
1 Is deformable image registration a solved problem? Marcel van Herk On behalf of the imaging group of the RT department of NKI/AVL Amsterdam, the Netherlands DIR 1
2 Image registration Find translation.deformation to align two 2D..4D data sets ( degrees of freedom) Allows combination of scans on a point by point basis Applications: Complementary data Motion tracking and compensation (imaging) Image guidance Adaptive radiotherapy Response monitoring Dose accumulation Data mining easy difficult Delineation: CT versus CT + PET reduce observer variations Marcel van Herk / NKI CT 10 mm 10 mm CT + PET 11 observers from 5 institutions delineated 22 patients (stage I to IIIB) 2
3 Free from any failure Estimate pattern of spread from response to incidental dose in clinical trial data (high risk prostate patients) Average dose no failures average dose failures - = 7 Gy p = 0.02 PSA controls PSA failures Witte et al, IJROBP2009; Chen et al, ICCR % % % % % 0.0 0% 0 12 median < median (53.1 Gy) Treatment group IV, Hospital A (n=67) Time (months) p = Y Deformable image registration is considered a cornerstone of 4D and adaptive RT 3
4 But, does it actually work? Christian Graeff used forced breath-hold and contrast to correctly deform inside of a pig heart CT - CT Totally different DVF with and without contrast Plastimatch Mayyas et al (Med Phys 2014) claim that they can precisely register the inside of the prostate between CT and CBCT Velocity Christian Graeff - GSI Cardiac-gated 4DCTs - native and contrast enhanced Native for treatment planning Contrast needed for motion maps GSI Helmholtzzentrum für Schwerionenforschung GmbH 8 4
5 Imaging motion maps 9 Overconfidence in commercial systems 5
6 Under the hood General Framework for Image Registration Fixed image Metric Similarity Optimizer Mapped Image Adjusted Parameters Floating image Interpolator Geometric Transformation Transformer 6
7 Grey Value / Intensity matching Uses all pixel values in ROI: e.g., sum of squared differences Somewhat slower to process all voxels: depends on the size of the ROI Root Mean Square Difference H(I MRI ) H(II CT ) H(I MRI-CT ) I MRI-CT 7
8 Mutual Information p(i 1,I 2 ) H(I MI(I MRI-CT 1,I 2 )=Sp(I )=H(I 1 MRI,I 2 )log) + H(I 2 CT ) - MI(I MRI,I CT ) p(i 1 )P(I 2 ) The Mutual Information of 2 images is the information maximized when that is the common are registered to both images H(I MRI-CT ) Mutual Information Marc Kessler / UM Aligned! p(i CT, I MR ) MI =.99 reformatted CT original MR 2D joint intensity histogram 8
9 Mutual Information Marc Kessler / UM Not so Aligned! p(i CT, I MR ) MI =.62 reformatted CT original MR 2D joint intensity histogram General Framework for Image Registration Fixed image Metric Similarity Optimizer Mapped Image Adjusted Parameters Floating image Interpolator Geometric Transformation Transformer 9
10 Degrees of Freedom PET/CT MR - CT 4D CT Marc Kessler / UM 0? 3 to 6 3 x N None? Few Many By enforcing smoothness the optimization becomes tractable Example thin-plate spline deformations (manual) 10
11 General Framework for Image Registration Fixed image Metric Similarity Optimizer Mapped Image Adjusted Parameters Floating image Interpolator Geometric Transformation Transformer Simon van Kranen/ NKI Deformable Registration Movie 11
12 Visual verification Checker Subtract sliding window Overlay The power of 4D animation 12
13 Deformable registration classes Different DVF provide same visual registration result Descriptive: it must look good e.g. contour propagation Quantitative: it must be an anatomically correct, also inside homogeneous organ e.g. dose accumulation DIR of the bladder? 13
14 The bladder is a balloon in a box with stuff it expands isotropically constrained in by the organs around it You get the contours right, but not the tissue cells danger for dose accumulation Penalty terms Several penalty terms can be implemented 1 : Smoothness penalty Rigidity penalty Volume penalty 1 (Rueckert, 1999), (Rohlfing, 2003), (Loeckx, 2006), (Staring, 2007) There is a great need for biomechanical penalties 14
15 General Framework for Image Registration Fixed image Metric Similarity Optimizer Constraint Mapped Image Adjusted Parameters Floating image Interpolator Geometric Transformation Transformer Prostate MRI w/wo Endo Rectal Coil Global smoothness penalty 15
16 CBCT Planning CT Registration Planning CT CBCT Constraint Deformable b-spline Deformable b-spline Registration Registration Validation 16
17 Analysis of variance O1 O2 O3 Analysis of variance O 1 O 2 O 3 O1 O2 O3 Accuracy of the observers,, : First human observer : Second human observer : Registration method Analysis of variance σ ( σ σ σ ) / σ ( σ σ σ ) / σ ( σ σ σ ) / o 1 μ o 2 o 3 17
18 Analysis of variance Landmark validation 7 patients, 7-8 fractions 23 landmarks per CBCT, two human observers B-spline deformable registration for landmark propagation Use of ANOVA method to correct for observer variation Results Method Rigid registration B-spline No penalties B-spline + penalties Accuracy (1SD mm) SD LR SD CC SD AP
19 Applications Image Enhancement 4DCT Full 3D DVF Motion corrected mean pos. Average frames Mid-position CT 19
20 Mid-ventilation method versus mid-position reconstruction (motion compensated 4DCT) using deformable registration 39 Mid-ventilation (one bin) Median of all bins deformed pixel by pixel to mid-position Motion compensated CBCT 20
21 PET-CT motion compensation 2.5 cm motion Compensated Lung DIR easy? 21
22 Repetitive 4D CT: treatment response Modes of Tumor Regression elastic erosion 22
23 Generate intermediate contours for plan selection approaches ESTRO IGRT 2012 Interpolation of cervix motion ESTRO IGRT
24 Adaptive replanning on average anatomy daily CBCTs deformation vector fields N Planning CT Average anatomy systematic deformations Kranen et al, IJROBP 2013 Summary Deformable image registration plays an important role in target definition, advanced treatment planning and image guidance Validation of registration accuracy is essential for each clinical problem Visual verification remain essential as automatic algorithms are never perfect Work towards faster and more robust deformable images registration continues In our clinic, rigid registration is still a cornerstone, e.g. for tumor contour propagation 24
25 Summary 2 Image registration does not know about biology and biomechanics Sliding tissue Tumor growth and regression Weight loss This is OK to make pretty pictures and propagate HU and OAR contours The best deformable registration between image A and B: copy A B In strongly believe DIR is not a solved problem! 25
Good Morning! Thank you for joining us
Good Morning! Thank you for joining us Deformable Registration, Contour Propagation and Dose Mapping: 101 and 201 Marc Kessler, PhD, FAAPM The University of Michigan Conflict of Interest I receive direct
More informationTG 132: Use of Image Registration and Fusion in RT
TG 132: Use of Image Registration and Fusion in RT Kristy K Brock, PhD, DABR, FAAPM Associate Professor Department of Radiation Oncology, University of Michigan Chair, AAPM TG 132: Image Registration and
More informationDeformable Image Registration, Contour Propagation and Dose Mapping: 101 and 201. Please do not (re)redistribute
Deformable Registration, Contour Deformable Registration, Contour Propagation and Dose Mapping: 101 and 201 Marc Kessler, PhD The University of Michigan Jean Pouliot, PhD University of California Learning
More informationOverview of Proposed TG-132 Recommendations
Overview of Proposed TG-132 Recommendations Kristy K Brock, Ph.D., DABR Associate Professor Department of Radiation Oncology, University of Michigan Chair, AAPM TG 132: Image Registration and Fusion Conflict
More informationVALIDATION OF DIR. Raj Varadhan, PhD, DABMP Minneapolis Radiation Oncology
VALIDATION OF DIR Raj Varadhan, PhD, DABMP Minneapolis Radiation Oncology Overview Basics: Registration Framework, Theory Discuss Validation techniques Using Synthetic CT data & Phantoms What metrics to
More informationImage Co-Registration II: TG132 Quality Assurance for Image Registration. Image Co-Registration II: TG132 Quality Assurance for Image Registration
Image Co-Registration II: TG132 Quality Assurance for Image Registration Preliminary Recommendations from TG 132* Kristy Brock, Sasa Mutic, Todd McNutt, Hua Li, and Marc Kessler *Recommendations are NOT
More informationREAL-TIME ADAPTIVITY IN HEAD-AND-NECK AND LUNG CANCER RADIOTHERAPY IN A GPU ENVIRONMENT
REAL-TIME ADAPTIVITY IN HEAD-AND-NECK AND LUNG CANCER RADIOTHERAPY IN A GPU ENVIRONMENT Anand P Santhanam Assistant Professor, Department of Radiation Oncology OUTLINE Adaptive radiotherapy for head and
More informationClinical Prospects and Technological Challenges for Multimodality Imaging Applications in Radiotherapy Treatment Planning
Clinical Prospects and Technological Challenges for Multimodality Imaging Applications in Radiotherapy Treatment Planning Issam El Naqa, PhD Assistant Professor Department of Radiation Oncology Washington
More informationImplementation of Advanced Image Guided Radiation Therapy
Image Acquisition Course Outline Principles, characteristics& applications of the available modalities Image Processing in the T x room Image guided treatment delivery What can / can t we do in the room
More informationImage Guidance and Beam Level Imaging in Digital Linacs
Image Guidance and Beam Level Imaging in Digital Linacs Ruijiang Li, Ph.D. Department of Radiation Oncology Stanford University School of Medicine 2014 AAPM Therapy Educational Course Disclosure Research
More informationCoverage based treatment planning to accommodate organ deformable motions and contouring uncertainties for prostate treatment. Huijun Xu, Ph.D.
Coverage based treatment planning to accommodate organ deformable motions and contouring uncertainties for prostate treatment Huijun Xu, Ph.D. Acknowledgement and Disclosure Dr. Jeffrey Siebers Dr. DJ
More informationUsing Pinnacle 16 Deformable Image registration in a re-treat scenario
Introduction Using Pinnacle 16 Deformable Image registration in a re-treat scenario This short Hands On exercise will introduce how the Deformable Image Registration (DIR) tools in Pinnacle can be used
More informationUse of Deformable Image Registration in Radiation Therapy. Colin Sims, M.Sc. Accuray Incorporated 1
Use of Deformable Image Registration in Radiation Therapy Colin Sims, M.Sc. Accuray Incorporated 1 Overview of Deformable Image Registration (DIR) Algorithms that can deform one dataset to another have
More informationHybrid Spline-based Multimodal Registration using a Local Measure for Mutual Information
Hybrid Spline-based Multimodal Registration using a Local Measure for Mutual Information Andreas Biesdorf 1, Stefan Wörz 1, Hans-Jürgen Kaiser 2, Karl Rohr 1 1 University of Heidelberg, BIOQUANT, IPMB,
More informationradiotherapy Andrew Godley, Ergun Ahunbay, Cheng Peng, and X. Allen Li NCAAPM Spring Meeting 2010 Madison, WI
GPU-Accelerated autosegmentation for adaptive radiotherapy Andrew Godley, Ergun Ahunbay, Cheng Peng, and X. Allen Li agodley@mcw.edu NCAAPM Spring Meeting 2010 Madison, WI Overview Motivation Adaptive
More informationUse of image registration and fusion algorithms and techniques in radiotherapy: Report of the AAPM Radiation Therapy Committee Task Group No.
Use of image registration and fusion algorithms and techniques in radiotherapy: Report of the AAPM Radiation Therapy Committee Task Group No. 132 Kristy K. Brock a) Department of Imaging Physics, The University
More informationTumor motion during liver SBRT
Tumor motion during liver SBRT - projects at Aarhus University Hospital - Per Poulsen, Esben Worm, Walther Fledelius, Morten Høyer Aarhus University Hospital, Denmark SBRT: Stereotactic Body Radiation
More information8/3/2017. Contour Assessment for Quality Assurance and Data Mining. Objective. Outline. Tom Purdie, PhD, MCCPM
Contour Assessment for Quality Assurance and Data Mining Tom Purdie, PhD, MCCPM Objective Understand the state-of-the-art in contour assessment for quality assurance including data mining-based techniques
More informationMethodological progress in image registration for ventilation estimation, segmentation propagation and multi-modal fusion
Methodological progress in image registration for ventilation estimation, segmentation propagation and multi-modal fusion Mattias P. Heinrich Julia A. Schnabel, Mark Jenkinson, Sir Michael Brady 2 Clinical
More informationMutual information based CT registration of the lung at exhale and inhale breathing states using thin-plate splines
Mutual information based CT registration of the lung at exhale and inhale breathing states using thin-plate splines Martha M. Coselmon, a) James M. Balter, Daniel L. McShan, and Marc L. Kessler Department
More informationAuto-Segmentation Using Deformable Image Registration. Disclosure. Objectives 8/4/2011
Auto-Segmentation Using Deformable Image Registration Lei Dong, Ph.D. Dept. of Radiation Physics University of Texas MD Anderson Cancer Center, Houston, Texas AAPM Therapy Educational Course Aug. 4th 2011
More informationVirtual Phantoms for IGRT QA
TM Virtual Phantoms for IGRT QA Why ImSimQA? ImSimQA was developed to overcome the limitations of physical phantoms for testing modern medical imaging and radiation therapy software systems, when there
More informationNonrigid Registration using Free-Form Deformations
Nonrigid Registration using Free-Form Deformations Hongchang Peng April 20th Paper Presented: Rueckert et al., TMI 1999: Nonrigid registration using freeform deformations: Application to breast MR images
More informationImage Registration. Prof. Dr. Lucas Ferrari de Oliveira UFPR Informatics Department
Image Registration Prof. Dr. Lucas Ferrari de Oliveira UFPR Informatics Department Introduction Visualize objects inside the human body Advances in CS methods to diagnosis, treatment planning and medical
More informationUsing a research real-time control interface to go beyond dynamic MLC tracking
in partnership with Using a research real-time control interface to go beyond dynamic MLC tracking Dr. Simeon Nill Joint Department of Physics at The Institute of Cancer Research and the Royal Marsden
More informationImage Quality Assessment and Quality Assurance of Advanced Imaging Systems for IGRT. AAPM Penn-Ohio Chapter Sep 25, 2015 Soyoung Lee, PhD
Image Quality Assessment and Quality Assurance of Advanced Imaging Systems for IGRT AAPM Penn-Ohio Chapter Sep 25, 2015 Soyoung Lee, PhD 1 Outline q Introduction q Imaging performances in 4D-CBCT Image
More informationQuantitative imaging for clinical dosimetry
Quantitative imaging for clinical dosimetry Irène Buvat Laboratoire d Imagerie Fonctionnelle U678 INSERM - UPMC CHU Pitié-Salpêtrière, Paris buvat@imed.jussieu.fr http://www.guillemet.org/irene Methodology
More informationAccounting for Large Geometric Changes During Radiotherapy. Disclosures. Current Generation DIR in RT 8/3/2016
Accounting for Large Geometric Changes During Radiotherapy Geoff Hugo, Ph.D. Department of Radiation Oncology Virginia Commonwealth University, Richmond, Virginia, USA Disclosures Research support: Philips
More informationiplan RT Image Advanced Contouring Workstation - Driving Physician Collaboration
iplan RT Image Advanced Contouring Workstation - Driving Physician Collaboration The iplan Contouring Workstation offers unique and innovative capabilities for faster contouring and consistent segmentation
More informationUse of MRI in Radiotherapy: Technical Consideration
Use of MRI in Radiotherapy: Technical Consideration Yanle Hu, PhD Department of Radiation Oncology, Mayo Clinic Arizona 04/07/2018 2015 MFMER slide-1 Conflict of Interest: None 2015 MFMER slide-2 Objectives
More informationAdaptive Local Multi-Atlas Segmentation: Application to Heart Segmentation in Chest CT Scans
Adaptive Local Multi-Atlas Segmentation: Application to Heart Segmentation in Chest CT Scans Eva M. van Rikxoort, Ivana Isgum, Marius Staring, Stefan Klein and Bram van Ginneken Image Sciences Institute,
More informationA Radiometry Tolerant Method for Direct 3D/2D Registration of Computed Tomography Data to X-ray Images
A Radiometry Tolerant Method for Direct 3D/2D Registration of Computed Tomography Data to X-ray Images Transfer Function Independent Registration Boris Peter Selby 1, Georgios Sakas 2, Stefan Walter 1,
More informationBuilding tools for image-guided adaptive radiotherapy of bladder cancer Chai, X.
UvA-DARE (Digital Academic Repository) Building tools for image-guided adaptive radiotherapy of bladder cancer Chai, X. Link to publication Citation for published version (APA): Chai, X. (2012). Building
More informationTomoTherapy Related Projects. An image guidance alternative on Tomo Low dose MVCT reconstruction Patient Quality Assurance using Sinogram
TomoTherapy Related Projects An image guidance alternative on Tomo Low dose MVCT reconstruction Patient Quality Assurance using Sinogram Development of A Novel Image Guidance Alternative for Patient Localization
More informationMR-guided radiotherapy: Vision, status and research at the UMC Utrecht. Dipl. Ing. Dr. Markus Glitzner
MR-guided radiotherapy: Vision, status and research at the UMC Utrecht Dipl. Ing. Dr. Markus Glitzner About myself Training Medizintechnik TU Graz PhD UMC Utrecht Clinical work Software implementation
More information3/27/2012 WHY SPECT / CT? SPECT / CT Basic Principles. Advantages of SPECT. Advantages of CT. Dr John C. Dickson, Principal Physicist UCLH
3/27/212 Advantages of SPECT SPECT / CT Basic Principles Dr John C. Dickson, Principal Physicist UCLH Institute of Nuclear Medicine, University College London Hospitals and University College London john.dickson@uclh.nhs.uk
More informationAutomatic Intrinsic Cardiac and Respiratory Gating from Cone-Beam CT Scans of the Thorax Region
Automatic Intrinsic Cardiac and Respiratory Gating from Cone-Beam CT Scans of the Thorax Region Andreas Hahn 1, Sebastian Sauppe 1, Michael Lell 2, and Marc Kachelrieß 1 1 German Cancer Research Center
More informationArtefakt-resistente Bewegungsschätzung für die bewegungskompensierte CT
Artefakt-resistente Bewegungsschätzung für die bewegungskompensierte CT Marcus Brehm 1,2, Thorsten Heußer 1, Pascal Paysan 3, Markus Oehlhafen 3, and Marc Kachelrieß 1,2 1 German Cancer Research Center
More informationDeformable Segmentation using Sparse Shape Representation. Shaoting Zhang
Deformable Segmentation using Sparse Shape Representation Shaoting Zhang Introduction Outline Our methods Segmentation framework Sparse shape representation Applications 2D lung localization in X-ray 3D
More informationEstimating 3D Respiratory Motion from Orbiting Views
Estimating 3D Respiratory Motion from Orbiting Views Rongping Zeng, Jeffrey A. Fessler, James M. Balter The University of Michigan Oct. 2005 Funding provided by NIH Grant P01 CA59827 Motivation Free-breathing
More information1. Learn to incorporate QA for surface imaging
Hania Al-Hallaq, Ph.D. Assistant Professor Radiation Oncology The University of Chicago ***No disclosures*** 1. Learn to incorporate QA for surface imaging into current QA procedures for IGRT. 2. Understand
More information7/31/2011. Learning Objective. Video Positioning. 3D Surface Imaging by VisionRT
CLINICAL COMMISSIONING AND ACCEPTANCE TESTING OF A 3D SURFACE MATCHING SYSTEM Hania Al-Hallaq, Ph.D. Assistant Professor Radiation Oncology The University of Chicago Learning Objective Describe acceptance
More informationSlicerRT Image-guided radiation therapy research toolkit for 3D Slicer
SlicerRT Image-guided radiation therapy research toolkit for 3D Slicer Csaba Pinter 1, Andras Lasso 1, An Wang 2, David Jaffray 2, and Gabor Fichtinger 1 1Laboratory for Percutaneous Surgery, Queen s University,
More informationBasic principles of MR image analysis. Basic principles of MR image analysis. Basic principles of MR image analysis
Basic principles of MR image analysis Basic principles of MR image analysis Julien Milles Leiden University Medical Center Terminology of fmri Brain extraction Registration Linear registration Non-linear
More informationPurely Data-Driven Respiratory Motion Compensation Methods for 4D-CBCT Image Registration and Reconstruction
2015 ANNUAL MAC-AAPM CONFERENCE: Purely Data-Driven Respiratory Motion Compensation Methods for 4D-CBCT Image Registration and Reconstruction M J Riblett 1, E Weiss 1, G E Christensen 2, and G D Hugo 1
More informationAssociation between pathology and texture features of multi parametric MRI of the prostate
Association between pathology and texture features of multi parametric MRI of the prostate 1,2 Peter Kuess, 3 D. Nilsson, 1,2 P. Andrzejewski, 2,4 P. Georg, 1 J. Knoth, 5 M. Susani, 3 J. Trygg, 2,6 T.
More informationTechnical aspects of SPECT and SPECT-CT. John Buscombe
Technical aspects of SPECT and SPECT-CT John Buscombe What does the clinician need to know? For SPECT What factors affect SPECT How those factors should be sought Looking for artefacts For SPECT-CT Issues
More informationMachine Learning for Medical Image Analysis. A. Criminisi
Machine Learning for Medical Image Analysis A. Criminisi Overview Introduction to machine learning Decision forests Applications in medical image analysis Anatomy localization in CT Scans Spine Detection
More informationState-of-the-Art IGRT
in partnership with State-of-the-Art IGRT Exploring the Potential of High-Precision Dose Delivery and Real-Time Knowledge of the Target Volume Location Antje-Christin Knopf IOP Medical Physics Group Scientific
More information8/3/2016. Image Guidance Technologies. Introduction. Outline
8/3/26 Session: Image Guidance Technologies and Management Strategies Image Guidance Technologies Jenghwa Chang, Ph.D.,2 Department of Radiation Medicine, Northwell Health 2 Hofstra Northwell School of
More informationHelp Guide. mm Copyright Mirada Medical Ltd, Mirada Medical RTx 1
Help Guide mm3237-1.6-1 Copyright Mirada Medical Ltd, 2000-2014. Mirada Medical RTx 1 Contents Help Guide... 1 Contents... 2 Introduction to RTx... 4 Regulatory Statement... 6 Notes... 15 Data Supported...
More informationThe Insight Toolkit. Image Registration Algorithms & Frameworks
The Insight Toolkit Image Registration Algorithms & Frameworks Registration in ITK Image Registration Framework Multi Resolution Registration Framework Components PDE Based Registration FEM Based Registration
More informationRespiratory Motion Estimation using a 3D Diaphragm Model
Respiratory Motion Estimation using a 3D Diaphragm Model Marco Bögel 1,2, Christian Riess 1,2, Andreas Maier 1, Joachim Hornegger 1, Rebecca Fahrig 2 1 Pattern Recognition Lab, FAU Erlangen-Nürnberg 2
More informationMedical Image Registration by Maximization of Mutual Information
Medical Image Registration by Maximization of Mutual Information EE 591 Introduction to Information Theory Instructor Dr. Donald Adjeroh Submitted by Senthil.P.Ramamurthy Damodaraswamy, Umamaheswari Introduction
More informationUvA-DARE (Digital Academic Repository) Motion compensation for 4D PET/CT Kruis, M.F. Link to publication
UvA-DARE (Digital Academic Repository) Motion compensation for 4D PET/CT Kruis, M.F. Link to publication Citation for published version (APA): Kruis, M. F. (2014). Motion compensation for 4D PET/CT General
More informationHST.582J / 6.555J / J Biomedical Signal and Image Processing Spring 2007
MIT OpenCourseWare http://ocw.mit.edu HST.582J / 6.555J / 16.456J Biomedical Signal and Image Processing Spring 2007 For information about citing these materials or our Terms of Use, visit: http://ocw.mit.edu/terms.
More informationADVANCING CANCER TREATMENT
3 ADVANCING CANCER TREATMENT SUPPORTING CLINICS WORLDWIDE RaySearch is advancing cancer treatment through pioneering software. We believe software has un limited potential, and that it is now the driving
More informationFinite Element Simulation of Moving Targets in Radio Therapy
Finite Element Simulation of Moving Targets in Radio Therapy Pan Li, Gregor Remmert, Jürgen Biederer, Rolf Bendl Medical Physics, German Cancer Research Center, 69120 Heidelberg Email: pan.li@dkfz.de Abstract.
More informationIMRT site-specific procedure: Prostate (CHHiP)
IMRT site-specific procedure: Prostate (CHHiP) Scope: To provide site specific instructions for the planning of CHHIP IMRT patients Responsibilities: Radiotherapy Physicists, HPC Registered Therapy Radiographers
More informationImage Segmentation and Registration
Image Segmentation and Registration Dr. Christine Tanner (tanner@vision.ee.ethz.ch) Computer Vision Laboratory, ETH Zürich Dr. Verena Kaynig, Machine Learning Laboratory, ETH Zürich Outline Segmentation
More informationMultimodality Imaging for Tumor Volume Definition in Radiation Oncology
81 There are several commercial and academic software tools that support different segmentation algorithms. In general, commercial software packages have better implementation (with a user-friendly interface
More informationAdvanced Targeting Using Image Deformation. Justin Keister, MS DABR Aurora Health Care Kenosha, WI
Advanced Targeting Using Image Deformation Justin Keister, MS DABR Aurora Health Care Kenosha, WI History of Targeting The advance of IMRT and CT simulation has changed how targets are identified in radiation
More informationAcknowledgements. Deformable Image Registration in Image Guided Therapy. Disclosure. Objectives 02/04/2011. Research Agreements:
Deformable Image Registration in Image Guided Therapy Kristy K Brock, Ph.D., DABR Physicist, Radiation Medicine Program, Princess Margaret Hospital Associate Professor, Depts of Radiation Oncology & Medical
More informationNonrigid Motion Compensation of Free Breathing Acquired Myocardial Perfusion Data
Nonrigid Motion Compensation of Free Breathing Acquired Myocardial Perfusion Data Gert Wollny 1, Peter Kellman 2, Andrés Santos 1,3, María-Jesus Ledesma 1,3 1 Biomedical Imaging Technologies, Department
More informationFast Elastic Registration for Adaptive Radiotherapy
Fast Elastic Registration for Adaptive Radiotherapy Urban Malsch 1, Christian Thieke 2,3, and Rolf Bendl 1 1 Department of Medical Physics u.malsch@dkfz.de 2 Clinical Cooperation Unit Radiooncology, DKFZ
More informationSIGMI Meeting ~Image Fusion~ Computer Graphics and Visualization Lab Image System Lab
SIGMI Meeting ~Image Fusion~ Computer Graphics and Visualization Lab Image System Lab Introduction Medical Imaging and Application CGV 3D Organ Modeling Model-based Simulation Model-based Quantification
More informationA multi-atlas approach for prostate segmentation in MR images
A multi-atlas approach for prostate segmentation in MR images Geert Litjens, Nico Karssemeijer, and Henkjan Huisman Diagnostic Image Analysis Group, Radboud University Nijmegen Medical Centre, Nijmegen,
More information4 CIM&Lab, Universidad Nacional de Colombia, Bogota, Colombia {edromero,
Segmentation of pelvic structures from planning CT based on a statistical shape model with a multiscale edge detector and geometrical likelihood measures Fabio Martinez 1,2,4, Oscar Acosta 1,2, Gaël Dréan
More informationRegistration by continuous optimisation. Stefan Klein Erasmus MC, the Netherlands Biomedical Imaging Group Rotterdam (BIGR)
Registration by continuous optimisation Stefan Klein Erasmus MC, the Netherlands Biomedical Imaging Group Rotterdam (BIGR) Registration = optimisation C t x t y 1 Registration = optimisation C t x t y
More informationNon-rigid Image Registration
Overview Non-rigid Image Registration Introduction to image registration - he goal of image registration - Motivation for medical image registration - Classification of image registration - Nonrigid registration
More informationImage Registration I
Image Registration I Comp 254 Spring 2002 Guido Gerig Image Registration: Motivation Motivation for Image Registration Combine images from different modalities (multi-modality registration), e.g. CT&MRI,
More informationA framework for deformable image registration validation in radiotherapy clinical applications
JOURNAL OF APPLIED CLINICAL MEDICAL PHYSICS, VOLUME 14, NUMBER 1, 2013 A framework for deformable image registration validation in radiotherapy clinical applications Raj Varadhan, 1,4a Grigorios Karangelis,
More informationMEDICAL IMAGE REGISTRATION GUIDED BY APPLICATION-SPECIFIC GEOMETRY FLORIS BERENDSEN
MEDICAL IMAGE REGISTRATION GUIDED BY APPLICATION-SPECIFIC GEOMETRY FLORIS BERENDSEN MEDICAL IMAGE REGISTRATION GUIDED BY APPLICATION-SPECIFIC GEOME- TRY PhD thesis, Utrecht University, The Netherlands
More informationDeformable Registration Using Scale Space Keypoints
Deformable Registration Using Scale Space Keypoints Mehdi Moradi a, Purang Abolmaesoumi a,b and Parvin Mousavi a a School of Computing, Queen s University, Kingston, Ontario, Canada K7L 3N6; b Department
More informationAutomated Image Analysis Software for Quality Assurance of a Radiotherapy CT Simulator
Automated Image Analysis Software for Quality Assurance of a Radiotherapy CT Simulator Andrew J Reilly Imaging Physicist Oncology Physics Edinburgh Cancer Centre Western General Hospital EDINBURGH EH4
More informationClinical Importance. Aortic Stenosis. Aortic Regurgitation. Ultrasound vs. MRI. Carotid Artery Stenosis
Clinical Importance Rapid cardiovascular flow quantitation using sliceselective Fourier velocity encoding with spiral readouts Valve disease affects 10% of patients with heart disease in the U.S. Most
More informationDosimetric Analysis Report
RT-safe 48, Artotinis str 116 33, Athens Greece +30 2107563691 info@rt-safe.com Dosimetric Analysis Report SAMPLE, for demonstration purposes only Date of report: ----------- Date of irradiation: -----------
More informationCBCT: Past, Present and Future. Disclosures. Computed Tomography. ATec Education Course Feb 28-Mar3, Douglas Moseley PhD, DABR
CBCT: Past, Present and Future Douglas Moseley PhD, DABR Disclosures License Agreement Modus Medical Educational Consultant Elekta Oncology Systems Computed Tomography First CT Scanner Third Generation
More informationAutomated segmentation methods for liver analysis in oncology applications
University of Szeged Department of Image Processing and Computer Graphics Automated segmentation methods for liver analysis in oncology applications Ph. D. Thesis László Ruskó Thesis Advisor Dr. Antal
More informationRespiratory Motion Compensation for Simultaneous PET/MR Based on Strongly Undersampled Radial MR Data
Respiratory Motion Compensation for Simultaneous PET/MR Based on Strongly Undersampled Radial MR Data Christopher M Rank 1, Thorsten Heußer 1, Andreas Wetscherek 1, and Marc Kachelrieß 1 1 German Cancer
More informationGPU applications in Cancer Radiation Therapy at UCSD. Steve Jiang, UCSD Radiation Oncology Amit Majumdar, SDSC Dongju (DJ) Choi, SDSC
GPU applications in Cancer Radiation Therapy at UCSD Steve Jiang, UCSD Radiation Oncology Amit Majumdar, SDSC Dongju (DJ) Choi, SDSC Conventional Radiotherapy SIMULATION: Construciton, Dij Days PLANNING:
More information7/31/ D Cone-Beam CT: Developments and Applications. Disclosure. Outline. I have received research funding from NIH and Varian Medical System.
4D Cone-Beam CT: Developments and Applications Lei Ren, PhD, DABR Department of Radiation Oncology Duke University Medical Center Disclosure I have received research funding from NIH and Varian Medical
More informationADVANCING CANCER TREATMENT
The RayPlan treatment planning system makes proven, innovative RayStation technology accessible to clinics that need a cost-effective and streamlined solution. Fast, efficient and straightforward to use,
More informationBrilliance CT Big Bore.
1 2 2 There are two methods of RCCT acquisition in widespread clinical use: cine axial and helical. In RCCT with cine axial acquisition, repeat CT images are taken each couch position while recording respiration.
More informationModeling and preoperative planning for kidney surgery
Modeling and preoperative planning for kidney surgery Refael Vivanti Computer Aided Surgery and Medical Image Processing Lab Hebrew University of Jerusalem, Israel Advisor: Prof. Leo Joskowicz Clinical
More informationInteractive Deformable Registration Visualization and Analysis of 4D Computed Tomography
Interactive Deformable Registration Visualization and Analysis of 4D Computed Tomography Burak Erem 1, Gregory C. Sharp 2, Ziji Wu 2, and David Kaeli 1 1 Department of Electrical and Computer Engineering,
More information3D Registration based on Normalized Mutual Information
3D Registration based on Normalized Mutual Information Performance of CPU vs. GPU Implementation Florian Jung, Stefan Wesarg Interactive Graphics Systems Group (GRIS), TU Darmstadt, Germany stefan.wesarg@gris.tu-darmstadt.de
More informationWhite Pixel Artifact. Caused by a noise spike during acquisition Spike in K-space <--> sinusoid in image space
White Pixel Artifact Caused by a noise spike during acquisition Spike in K-space sinusoid in image space Susceptibility Artifacts Off-resonance artifacts caused by adjacent regions with different
More informationAtlas Based Segmentation of the prostate in MR images
Atlas Based Segmentation of the prostate in MR images Albert Gubern-Merida and Robert Marti Universitat de Girona, Computer Vision and Robotics Group, Girona, Spain {agubern,marly}@eia.udg.edu Abstract.
More informationDevelopment of a deformable lung phantom for the evaluation of deformable registration
JOURNAL OF APPLIED CLINICAL MEDICAL PHYSICS, VOLUME 11, NUMBER 1, WINTER 2010 Development of a deformable lung phantom for the evaluation of deformable registration Jina Chang, 1 Tae-Suk Suh, 1a Dong-Soo
More informationNonrigid Registration Using a Rigidity Constraint
Nonrigid Registration Using a Rigidity Constraint Marius Staring, Stefan Klein and Josien P.W. Pluim Image Sciences Institute, University Medical Center Utrecht, P.O. Box 85500, 3508 GA, Room Q0S.459,
More information2 Michael E. Leventon and Sarah F. F. Gibson a b c d Fig. 1. (a, b) Two MR scans of a person's knee. Both images have high resolution in-plane, but ha
Model Generation from Multiple Volumes using Constrained Elastic SurfaceNets Michael E. Leventon and Sarah F. F. Gibson 1 MIT Artificial Intelligence Laboratory, Cambridge, MA 02139, USA leventon@ai.mit.edu
More informationHierarchical Multi structure Segmentation Guided by Anatomical Correlations
Hierarchical Multi structure Segmentation Guided by Anatomical Correlations Oscar Alfonso Jiménez del Toro oscar.jimenez@hevs.ch Henning Müller henningmueller@hevs.ch University of Applied Sciences Western
More informationMedicale Image Analysis
Medicale Image Analysis Registration Validation Prof. Dr. Philippe Cattin MIAC, University of Basel Prof. Dr. Philippe Cattin: Registration Validation Contents 1 Validation 1.1 Validation of Registration
More informationIntroduction to Medical Image Registration
Introduction to Medical Image Registration Sailesh Conjeti Computer Aided Medical Procedures (CAMP), Technische Universität München, Germany sailesh.conjeti@tum.de Partially adapted from slides by: 1.
More informationDesign and performance characteristics of a Cone Beam CT system for Leksell Gamma Knife Icon
Design and performance characteristics of a Cone Beam CT system for Leksell Gamma Knife Icon WHITE PAPER Introduction Introducing an image guidance system based on Cone Beam CT (CBCT) and a mask immobilization
More informationANALYSIS OF PULMONARY FIBROSIS IN MRI, USING AN ELASTIC REGISTRATION TECHNIQUE IN A MODEL OF FIBROSIS: Scleroderma
ANALYSIS OF PULMONARY FIBROSIS IN MRI, USING AN ELASTIC REGISTRATION TECHNIQUE IN A MODEL OF FIBROSIS: Scleroderma ORAL DEFENSE 8 th of September 2017 Charlotte MARTIN Supervisor: Pr. MP REVEL M2 Bio Medical
More informationDigital Tomosynthesis for Target Localization
Digital Tomosynthesis for Target Localization Fang-Fang Yin, Devon Godfrey, Lei Ren Jacqueline Maurer, Jackie Q-L Wu Duke University Medical Center Acknowledgements Duke Radiation Oncology faculty and
More informationJOURNAL OF APPLIED CLINICAL MEDICAL PHYSICS, VOLUME 8, NUMBER 4, FALL 2007
JOURNAL OF APPLIED CLINICAL MEDICAL PHYSICS, VOLUME 8, NUMBER 4, FALL 2007 Quantitative evaluation of a cone-beam computed tomography planning computed tomography deformable image registration method for
More informationUvA-DARE (Digital Academic Repository) Motion compensation for 4D PET/CT Kruis, M.F. Link to publication
UvA-DARE (Digital Academic Repository) Motion compensation for 4D PET/CT Kruis, M.F. Link to publication Citation for published version (APA): Kruis, M. F. (2014). Motion compensation for 4D PET/CT General
More information