Electrospray Ionization Mass Spectrometric Analysis of Highly Reactive Glycosyl Halides
|
|
- Gabriel French
- 6 years ago
- Views:
Transcription
1 , ; doi:1.339/molecules Communication OPEN ACCESS molecules ISSN Electrospray Ionization Mass Spectrometric Analysis of Highly Reactive Glycosyl Halides Attila Bokros 1, Annamária Bánfi 1, Zoltán Kupihár 1, *, Zoltán Kele 1, Tünde Zita Illyés 2, János Szolomájer 1 and Lajos Kovács 1, * 1 2 Department of Medicinal Chemistry, Faculty of Medicine, University of Szeged, Dóm tér 8, H-672 Szeged, Hungary; s: bokros.attila@med.u-szeged.hu (A.B.); banfi.annamaria@med.u-szeged.hu (A.B.); kele.zoltan@med.u-szeged.hu (Z.K.); szolomajer.janos@med.u-szeged.hu (J.S.) Department of Organic Chemistry, Faculty of Science and Technology, University of Debrecen, Egyetem tér 1, H-41 Debrecen, Hungary; illyes.tunde@science.unideb.hu * Authors to whom correspondence should be addressed; s: kupihar.zoltan@med.u-szeged.hu (Z.K.); kovacs.lajos@med.u-szeged.hu (L.K.); Tel.: ; Fax: Received: 18 May 212; in revised form: 21 June 212 / Accepted: 25 June 212 / Published: 1 July 212 Supplementary Information Unidentified peaks designated by asterisks * and ** have been used as a kind of internal standards to compare the signal intensities of lithium, sodium, potassium and ammonium adduct ions; Identified peaks have labelled in red; The desired molecular ion adducts [M+cation] + are shown in blue circles.
2 S2 Spectrum 1. Analyte 2 in acetonitrile without any adduct forming agent. CH 3 O O Chemical Formu la: C 14 H 19 BrO 9 Exact Mass: ( 79 Br) O 1267 _1_ 21 (.388) Cm (18:25) TOF MS ES O Br * H 3 C O O O O CH 3 CH 3 O [M+CF 3 COOLi+Li] [M +Li]
3 S3 Spectrum 2. Analyte 2 in acetonitrile with 2 formic acid. 1267_1_ 28 (.517) Cm (23:36) * TOF MS ES+ 2.5e ** [M+Na]
4 S4 Spectrum 3. Analyte 2 in acetonitrile with LiCl. LiCl 1267_1_1 24 (.443) Cm (23:29) [M+CF 3 COOLi+Li] TOF MS ES+ 3.5e [M+Li] *
5 S5 Spectrum 4. Analyte 2 in acetonitrile with NaCl. NaCl 1267_1_2 25 (.461) Cm (24:29) * TOF MS ES+ 1.74e3 ** [M+Na] + [M+CF 3 COOLi+Li] [M+Li] [M+CF 3 COOLi+Na]
6 S6 Spectrum 5. Analyte 2 in acetonitrile with KCl. KCl 1267_1_3 28 (.517) Cm (27:35) * TOF MS ES+ 2.27e3 ** [M+Na] [M+K] + [M+CF 3 COOLi+Li] + [M+CF 3 COOLi+Na]
7 S7 Spectrum 6. Analyte 2 in acetonitrile with LiNO 3. gli br + LiNO3 poz 12611_5 26 (.48) Cm (23:39) TOF MS ES e3 [M+Li] + [M+LiNO 3 +Li] [M+CF 3 COOLi+Li] *
8 S8 Spectrum 7. Analyte 2 in acetonitrile with NaNO 3. NaNO3 1267_2_2 25 (.461) Cm (25:32) ** TOF MS ES+ 3.41e3 * [M+Na]
9 S9 Spectrum 8. Analyte 2 in acetonitrile with KNO 3. KNO3 1267_2_3 23 (.424) Cm (22:31) TOF MS ES+ 3.e3 * ** [M+K] [M+Na]
10 S1 Spectrum 9. Analyte 2 in acetonitrile with LiClO 4. [M+Li] + gli br + LiClO4 poz 12611_6 27 (.498) Cm (23:33) TOF MS ES e3 [M+LiClO 4 +Li] *
11 S11 Spectrum 1. Analyte 2 in acetonitrile with NaClO 4. NaClO4 1267_3_2 25 (.463) Cm (24:4) [M+Na] TOF MS ES+ 2.38e3 ** [M+NaClO 4 +Na] *
12 S12 Spectrum 11. Analyte 2 in acetonitrile with KClO 4. KClO4 1267_3_3 26 (.48) Cm (26:35) ** TOF MS ES+ 4.69e3 [M+K] [M+Na] *
13 S13 Spectrum 12. Analyte 2 in acetonitrile with NH 4 Cl. NH4Cl 1267_1_4 26 (.48) Cm (25:34) ** TOF MS ES+ 4.13e3 [M+Na] * [M+NH 4 ] [M+K]
14 S14 Spectrum 13. Analyte 2 in acetonitrile with NH 4 NO 3. NH4NO3 1267_2_4 25 (.461) Cm (24:34) ** TOF MS ES+ 2.73e3 * [M+Na] [M+NH 4 ] + [M+K]
15 S15 Spectrum 14. Analyte 2 in acetonitrile with NH 4 OOCCH 3. NH4oac 1267_4_5 25 (.461) Cm (24:33) * ** TOF MS ES+ 2.8e [M+Na] [M+NH 4 ]
16 S16 Spectrum 15. Analyte 2 in acetonitrile with NH 4 OOCH. NH4form 1267_4_6 3 (.556) Cm (28:39) * TOF MS ES+ 3.e3 ** [M+NH 4 ] [M+Na]
17 S17 Spectrum 16. Analyte 2 in acetonitrile with NH 4 HCO 3. NH4HCO3 1267_4_7 22 (.46) Cm (22:32) * ** TOF MS ES+ 2.91e [M+NH 4 ] [M+Na]
18 S18 Spectrum 17. Analyte 2 in acetonitrile with LiBr. [M+Li] + gli br + LiBr poz 12611_4 35 (.646) Cm (32:44) TOF MS ES e3 [M+LiBr+Li]
19 S19 Spectrum 18. Analyte 2 in acetonitrile with LiI. [M+Li] + gli br + LiI poz 12611_3 36 (.664) Cm (34:44) TOF MS ES e3 [M+LiI+Li]
20 S2 Spectrum 19. Analyte 2 in acetonitrile with LiF (negative ion mode) _BRGLI_NAF_NEG 29 (.535) Cm (24:36) 113. [CF 3 TOF MS ES- 55 [Br] [2CF 3 COOLi+CF [CF 3 COOLi+CF [3CF 3 COOLi+CF
21 S21 Spectrum 2. Analyte 2 in acetonitrile with LiCl (negative ion mode) _qp_brgli_neg 18 (.442) Cm (17:24) [2CF 3 COOLi+CF : TOF MS ES- 44 [3CF 3 COOLi+CF 3 [3CF 3 COOLi+Cl] [4CF 3 COOLi+CF [CF 3 COOLi+CF 3 [5CF 3 COOLi+CF [CF [4CF 3 COOLi+Cl]
22 S22 Spectrum 21. Analyte 2 in acetonitrile with LiBr (negative ion mode). [4LiBr+Br] - gli br + LiBr neg 12611_1 28 (.517) Cm (22:46) TOF MS ES e3 [LiBr+Br] [CF 3 COOLi+3LiBr+Br] - [CF 3 COOLi+2LiBr+Br] [5LiBr+Br] - [2CF 3 COOLi+CF [CF 3 COOLi+CF [2LiBr+Br] [3LiBr+Br] [CF 3 COOLi+Br] - [CF 3 COOLi+LiBr+Br] [Br]
23 S23 Spectrum 22. Analyte 2 in acetonitrile with LiBr (negative ion mode). gli br + LiI neg 12611_2 4 (.738) Cm (38:52) [4LiI+I] - TOF MS ES e4 [2LiI+I] [CF 3 COOLi+LiI+I] [3LiI+I] [CF 3 COOLi+2LiI+I] [CF 3 COOLi+3LiI+I] [3LiI+NaI+I] - [5LiI+I] [2CF 3 COOLi+LiI+I] [CF 3 COOLi+4LiI+I] - [2CF 3 COOLi+2LiI+I] [3CF 3 COOLi+I] - [2CF 3 COOLi+3LiI+I]
24 S24 Spectrum 23. Analyte 2 in acetonitrile with NH 4 OOCCH 3 (negative ion mode) _BRGLI_NH4OAC_NEG 19 (2.1) Cm (16:117) [Br] - TOF MS ES- 1.15e3 [2CF 3 COOLi+CF [CF [CF 3 COOLi+CF [3CF 3 COOLi+CF
25 S25 Spectrum 24. Accurate mass analysis of analyte 1 in acetonitrile with LiCl. LiCl MeCN 12612_qp_clgli_poshrms 134 (3.292) AM (Cen,4, 8., Ht,86.,785.84,.7,LS 5); Sm (SG, 3x5.); Sb (15,1. ); Cm (133:138) [M( 35 Cl)+Li] + 1: TOF MS ES+ 1.64e
26 S26 Table 25. Report of accurate mass analysis of analyte 1 in acetonitrile with LiCl. Elemental Composition Report Single Mass Analysis Tolerance = 1. PPM / DBE: min = -1.5, max = 5. Element prediction: Off Number of isotope peaks used for i-fit = 3 Monoisotopic Mass, Even Electron Ions 65 formula(e) evaluated with 1 results within limits (all results (up to ) for each mass) Elements Used: C: -5 H: - 7Li: 1-1 O: -2 35Cl: 1-1 Minimum: -1.5 Maximum: Mass (Norm) Calc. Mass Formula mda PPM DBE i-fit i-fit C21 H21 7Li O5 35Cl
27 S27 Spectrum 26. CID spectrum of peaks 537/539 of analyte 2 in acetonitrile-licl at low collision energy. pljusz 12615_GLIBR_LICL_ (.627) Cm (32:34) [M+CF 3 COOLi+Li] + TOF MSMS 537.2ES [M+Li]
28 S28 Spectrum 27. CID spectrum of peaks 417/419 and 537/539 of analyte 2 in acetonitrile-licl at high collision energy. pljusz 12615_GLIBR_LICL_ (.424) Cm (21:27) [M-HBr+Li] + TOF MSMS 417.2ES+ 3.32e [M+Li] _GLIBR_LICL_ (.775) Cm (38:5) [M-HBr+Li] + TOF MSMS 537.2ES+ 2.44e3 [M+Li] [M+CF 3 COOLi+Li]
Application Note. Abstract. Authors. Forensic Toxicology
An Application Kit for the Screening of Samples for Analytes of Forensic Toxicological Interest using TOF or Q-TOF LC/MS with a Personal Forensic Toxicology Database Application Note Forensic Toxicology
More informationMultiGlycan ESI User Manual
MultiGlycan ESI User Manual 1. Download User can download the latest MultiGlycan ESI from our website http://darwin.informatics.indiana.edu/multiglycan/ 2. Installation 2.1. Unzip Unzip downloaded file
More informationMS-FINDER tutorial. Last edited in Aug 10, 2018
MS-FINDER tutorial Last edited in Aug 10, 2018 Abstract The purpose of metabolomics is to perform the comprehensive analysis for small biomolecules of living organisms. Gas chromatography coupled with
More informationMassHunter Personal Compound Database and Library Manager for Forensic Toxicology
MassHunter Personal Compound Database and Library Manager for Forensic Toxicology Quick Start Guide What is MassHunter Personal Compound Database and Library Manager? 2 Installation 3 Main Window 4 Getting
More informationMassHunter Pesticides PCD or PCDL Quick Start Guide
MassHunter Pesticides PCD or PCDL Quick Start Guide What is the MassHunter Pesticides PCD or PCDL? 3 Kit Contents 4 Where to find more information Before You Begin 7 Installation 7 Required reagents and
More informationAgilent G6854 MassHunter Personal Pesticide Database
Agilent G6854 MassHunter Personal Pesticide Database Quick Start Guide What is MassHunter Personal Pesticide Database? 2 Installation 3 Main Window 4 Getting Started 11 Database operations 12 Searching
More informationAgilent G6854AA MassHunter Personal Pesticide Database Kit Quick Start Guide
Agilent G6854AA MassHunter Personal Pesticide Database Kit Quick Start Guide What is the MassHunter Personal Pesticide Database Kit? 1 Kit Content 2 Where to find more information 3 Before You Begin 4
More informationMS-FINDER tutorial. Last edited in Sep. 10, 2018
MS-FINDER tutorial Last edited in Sep. 10, 2018 Abstract The purpose of metabolomics is to perform the comprehensive analysis for small biomolecules of living organisms. Gas chromatography coupled with
More informationAgilent G6855AA MassHunter Personal
Agilent G6855AA MassHunter Personal Forensic Toxicology Database Kit Quick Start Guide What is the MassHunter Personal Forensic Toxicology Database Kit? 1 Kit Content 2 Where to find more information 4
More informationSupporting Information
Supporting Information Quantitative Profiling of Oxidized Phospholipids in Lipoproteins from Patients with Coronary Artery Disease by Hollow Fiber Flow Field-Flow Fractionation and Nanoflow Liquid Chromatography-Tandem
More informationValidation of a Direct Analysis in Real Time Mass Spectrometry (DART-MS) Method for the Quantitation of Six Carbon Sugar in Saccharification Matrix
Validation of a Direct Analysis in Real Time Mass Spectrometry (DART-MS) Method for the Quantitation of Six Carbon Sugar in Saccharification Matrix Daudi Saang onyo, a,b Gary Selby b and Darrin L. Smith*
More informationAgilent G6854AA MassHunter Personal Compound Database
Agilent G6854AA MassHunter Personal Compound Database Quick Start Guide This guide describes how to install and use MassHunter Personal Compound Database. Where to find more information What is Personal
More informationOverview of Ibis Forensic Analysis Software
Thomas Hall, Ph.D. Overview of Ibis Forensic Analysis Software Outline General software interface Features Data processing Data analysis mtdna SNPs Forensic SNP Analysis Overview of Ibis Forensic Analysis
More informationSkyline High Resolution Metabolomics (Draft)
Skyline High Resolution Metabolomics (Draft) The Skyline Targeted Proteomics Environment provides informative visual displays of the raw mass spectrometer data you import into your Skyline documents. Originally
More informationTraceFinder Administrator Quick Reference Guide
TraceFinder Administrator Quick Reference Guide This quick reference guide discusses the application configuration tasks assigned to the ITAdmin and LabDirector roles when user security is activated in
More informationTeach Yourself Microsoft Word Topic 5 - Revision, Font and Paragraph Tips
http://www.gerrykruyer.com Teach Yourself Microsoft Word Topic 5 - Revision, Font and Paragraph Tips In this introduction to Level 2 Microsoft Word you will revise basic concepts from the Level 1 course,
More informationOpenLynx User's Guide
OpenLynx User s Guide OpenLynx User's Guide Version 4.0 Waters part No 715000405 Micromass Part No - 6666670 5 February, 2002 i OpenLynx User s Guide OpenLynx User s Guide The software described in this
More informationISO/TS IDF/RM 230
TECHNICAL SPECIFICATION ISO/TS 15495 IDF/RM 230 First edition 2010-11-01 Milk, milk products and infant formulae Guidelines for the quantitative determination of melamine and cyanuric acid by LC-MS/MS
More informationProtein Deconvolution Quick Start Guide
Protein Deconvolution Quick Start Guide The electrospray ionization (ESI) of intact peptides and proteins produces mass spectra containing a series of multiply charged ions with associated mass-to-charge
More informationLC-MS Peak Annotation and Identification
LC-MS Peak Annotation and Identification with CAMERA Carsten Kuhl, Ralf Tautenhahn and Steffen Neumann October 30, 2017 1 Introduction The R-package CAMERA is a Collection of Algorithms for MEtabolite
More informationProgenesis CoMet User Guide
Progenesis CoMet User Guide Analysis workflow guidelines for version 2.0 Contents Introduction... 3 How to use this document... 3 How can I analyse my own runs using CoMet?... 3 LC-MS Data used in this
More informationLC-MS Data Pre-Processing. Xiuxia Du, Ph.D. Department of Bioinformatics and Genomics University of North Carolina at Charlotte
LC-MS Data Pre-Processing Xiuxia Du, Ph.D. Department of Bioinformatics and Genomics University of North Carolina at Charlotte Outline Raw LC-MS data - Profile and centroid data - Mass vs. retention time
More informationXcalibur. QuickQuan. User Guide. XCALI Revision C July For Research Use Only Not for use in Diagnostic Procedures
Xcalibur QuickQuan User Guide XCALI-97195 Revision C July 2007 For Research Use Only Not for use in Diagnostic Procedures 2007 Thermo Fisher Scientific Inc. All rights reserved. Microsoft, Access, Excel,
More informationSpectrum Mill B Creating Custom Modifications and Search Modes. A Guide for System Administrators
Spectrum Mill B.04.00 Creating Custom Modifications and Search Modes A Guide for System Administrators Table of Contents Spectrum Mill B.04.00 Creating Custom Modifications and Search Modes... i 1 Overview...
More informationSupporting Information Treatment of Vinca minor Leaves with Methyl Jasmonate Extensively Alters the Pattern and Composition of Indole Alkaloids
Supporting Information Treatment of Vinca minor Leaves with Methyl Jasmonate Extensively Alters the Pattern and Composition of Indole Alkaloids Sara Abouzeid, Ulrike Beutling, Frank Surup, Fatma M. Abdel
More informationDetermination of suppressor with CVS using the calibration technique smartdt with dynamic addition volumes
The Application Bulletin describes the determination of suppressor in acid copper baths by smartdt. The determination of suppressor with dilution titration (DT) involves numerous additions with standard
More informationISO INTERNATIONAL STANDARD. Soil quality Determination of ph. Qualité du sol Détermination du ph. Second edition
INTERNATIONAL STANDARD ISO 10390 Second edition 2005-02-15 Soil quality Determination of ph Qualité du sol Détermination du ph Reference number ISO 10390:2005(E) ISO 2005 ISO 10390:2005(E) PDF disclaimer
More informationUpdate on Data Acquisition Software Improvements Since Last Year. Additional Critical Orifices
4 th AMS Users Meeting Update on Data Acquisition Software Improvements Since Last Year Jose-Luis Jimenez Caltech Pasadena, CA Oct. 24-27, 2002 Additional Critical Orifices We can have 110 um and 130 um
More informationAgilent G6825AA METLIN Personal Metabolite Database for MassHunter Workstation
Agilent G6825AA METLIN Personal Metabolite Database for MassHunter Workstation Quick Start Guide This guide describes how to install and use METLIN Personal Metabolite Database for MassHunter Workstation.
More informationCuratr: a web application for creating, curating, and sharing a mass spectral library
Curatr: a web application for creating, curating, and sharing a mass spectral library Andrew Palmer (1), Prasad Phapale (1), Dominik Fay (1), Theodore Alexandrov (1,2) (1) European Molecular Biology Laboratory,
More informationISO INTERNATIONAL STANDARD. Water quality Digestion for the determination of selected elements in water Part 2: Nitric acid digestion
INTERNATIONAL STANDARD ISO 15587-2 First edition 2002-03-01 Water quality Digestion for the determination of selected elements in water Part 2: Nitric acid digestion Qualité de l'eau Digestion pour la
More informationHardware Guide. AB SCIEX QTRAP 5500 System
Hardware Guide AB SCIEX QTRAP 5500 System D1000079384 E May 2010 This document is provided to customers who have purchased AB SCIEX equipment to use in the operation of such AB SCIEX equipment. This document
More informationLAAPTOF - Updates. AMS users meeting
LAAPTOF - Updates AMS users meeting 2012 2013 1 Instrument AMS users meeting 2012 2013 2 Spectra (oxalic acid) AMS users meeting 2012 2013 3 Spectra (Arizona test dust) AMS users meeting 2012 2013 4 Data
More informationTo get started download the dataset, unzip files, start Maven, and follow steps below.
Getting Started. This document provides basic overview of Maven functionality. For the purpose of demonstration we will use an example CMV Viral Infection time course dataset. (Dataset Download). There
More informationAndreas Reimann Berlin im Juli 2009
Agilent Technologies ASMS 2009 Andreas Reimann Berlin im Juli 2009 New Triple Quad LC/MS Portfolio 6410, 6430 & 6460 Page 2 Comparison of 6400 Series QQQs 6410BA 6430 6460 Sensitivity: 1 pg reserpine S/N
More informationDetermination of suppressor with CVS using the calibration technique «smartdt» with dynamic addition volumes
technique «smartdt» with dynamic addition volumes The Application Bulletin describes the determination of suppressor in acid copper baths by smartdt. The determination of suppressor with dilution titration
More informationSkyline MS1 Full Scan Filtering
Skyline MS1 Full Scan Filtering The Skyline Targeted Proteomics Environment provides informative visual displays of the raw mass spectrometer data you import into your Skyline project. These displays allow
More informationGPS Explorer Software For Protein Identification Using the Applied Biosystems 4700 Proteomics Analyzer
GPS Explorer Software For Protein Identification Using the Applied Biosystems 4700 Proteomics Analyzer Getting Started Guide GPS Explorer Software For Protein Identification Using the Applied Biosystems
More informationTraceFinder Analysis Quick Reference Guide
TraceFinder Analysis Quick Reference Guide This quick reference guide describes the Analysis mode tasks assigned to the Technician role in the Thermo TraceFinder 3.0 analytical software. For detailed descriptions
More informationAnnotation of LC-MS metabolomics datasets by the metams package
Annotation of LC-MS metabolomics datasets by the metams package Pietro Franceschi April 30, 2018 1 Introduction metams is designed to perform the analysis of LC-MS and GC-MSbased metabolomics assays. For
More informationStatistical Process Control in Proteomics SProCoP
Statistical Process Control in Proteomics SProCoP This tutorial will guide you through the installation of SProCoP and using it to perform statistical analysis on a sample Skyline file. Getting Started
More informationNovel Enzymatic Synthesis of 4-O-Cinnamoyl Quinic and Shikimic Acid Derivatives
Revised: May 003 Novel Enzymatic Synthesis of --Cinnamoyl Quinic and Shikimic Acid Derivatives Nuria Armesto, Miguel Ferrero, Susana Fernández, and Vicente Gotor* Departamento de Química rgánica e Inorgánica,
More informationSupporting Information for: 1: Kansas State University, Department of Chemistry, 213 CB Building, 1212 Mid-Campus
Supporting Information for: Insights from Theory and Experiment on the Photochromic spiro- Dihydropyrrolo-Pyridazine/Betaine System Amendra Fernando, Tej B. Shrestha,,2 Yao Liu, 3 Aruni P. Malalasekera,
More informationXcalibur Library Browser
Thermo Xcalibur Library Browser User Guide Creating and Searching Spectral Libraries Software Version 3.0 XCALI-97552 Revision A June 2013 2013 Thermo Fisher Scientific Inc. All rights reserved. Xcalibur
More informationSingle Cell Peptide Heterogeneity of Rat Islets of Langerhans
Single Cell Peptide Heterogeneity of Rat Islets of Langerhans Erik T. Jansson, Troy J. Comi, Stanislav S. Rubakhin, and Jonathan V. Sweedler* Department of Chemistry and the Beckman Institute for Advanced
More informationENDF/B-VII.1 versus ENDFB/-VII.0: What s Different?
LLNL-TR-548633 ENDF/B-VII.1 versus ENDFB/-VII.0: What s Different? by Dermott E. Cullen Lawrence Livermore National Laboratory P.O. Box 808/L-198 Livermore, CA 94550 March 17, 2012 Approved for public
More informationInstallation Instructions
Analyst QS Service Pack 5 (SP5) Release Notes Final Version Analyst QS Service Pack 5 includes all previous improvements released in Analyst QS SP1 through Analyst QS SP4. It addresses a number of issues
More informationSummary of Recent Changes to the AMS Data Acquisition Program (up to Version 4.3)
Summary of Recent Changes to the AMS Data Acquisition Program (up to Version 4.3) Manjula Canagaratna Aerodyne Research Boulder AMS Users Mini Meeting University of Colorado March 9-10, 2003 Update on
More informationHOW TO PERFORM LC-MS ANNOTATIONS? W4M Core Team 1 «LC-MS ANNOTATION» MODULES IN W4M The «LCMS Annotation» modules allow you to perform: «Adducts» annotation «Chemical» annotation: Meta-engine (Chemspider)
More informationHigh-accuracy peak picking of proteomics data
High-accuracy peak picking of proteomics data E. Lange, C. Gröpl, K. Reinert 1, O. kohlbacher 2 and A. Hildebrandt 3 1 Institute of Computer Science, Free University of Berlin 14195 Berlin, Takustr. 9,
More informationSupporting information
Supporting information 1S. DECOMP output for the peptide amino-acid decomposition test with monoisotopic mass = 1000 +/- 0.2 # imsdecomp 1.3 # Copyright 2007,2008 Informatics for Mass Spectrometry group
More informationQ Exactive HF-X QuickStart Guide
Q Exactive HF-X QuickStart Guide About this Guide Q Exactive HF-X Tune This Q Exactive HF-X QuickStart Guide gives an introduction on setting up and using the Thermo Scientific Q Exactive HF-X mass spectrometer.
More informationDirect Infusion Mass Spectrometry Processing (DIMaSP) Instructions for use
Direct Infusion Mass Spectrometry Processing (DIMaSP) Instructions for use The following instructions assume the user has a batch of paired sample and blank spectra that have been exported to a comma-separated
More informationHOLIDAY HOME WORK CLASS X ENGLISH
HOLIDAY HOME WORK CLASS X ENGLISH Q1. Prepare a project report on: - Life history and achievements of Shakespeare. (10-12 pages) Q2. Write articles on the following topics: - (i) Conservation of environment
More informationUser guide. Using the ALEX 123 framework to identify lipid molecules detected by MALDI-based high-resolution FTMS 1 and ITMS 2 analysis
User guide for Using the ALEX 123 framework to identify lipid molecules detected by MALDI-based high-resolution FTMS 1 and ITMS 2 analysis Used in the publication: Ellis et al. (2018, in review) Version
More informationFinnigan Xcalibur. Getting Productive: Qualitative Analysis. XCALI Revision B March 2006
Finnigan Xcalibur Getting Productive: Qualitative Analysis XCALI-97101 Revision B March 2006 For Research Use Only Not for use in Diagnostic Procedures 2005 2006 Thermo Electron Corporation. All rights
More informationImproved Centroid Peak Detection and Mass Accuracy using a Novel, Fast Data Reconstruction Method
Overview Improved Centroid Peak Detection and Mass Accuracy using a Novel, Fast Data Reconstruction Method James A. Ferguson 1, William G. Sawyers 1, Keith A. Waddell 1, Anthony G. Ferrige 2, Robert Alecio
More informationIPR Äspö Hard Rock Laboratory. International Progress Report. TRUE Block Scale project. Summary of chemical data December 2002
International Progress Report IPR-03-25 Äspö Hard Rock Laboratory TRUE Block Scale project Summary of chemical data December 2002 Jeanette Carmström SKB April 2003 Svensk Kärnbränslehantering AB Swedish
More informationExperiences from CRYRING diagnostics
Workshop on Low Current, Low Energy Beam Diagnostics November 23-25 th 2009, Groβsachsen, Germany Experiences from CRYRING diagnostics A. Källberg Manne Siegbahn Laboratory Stockholm University Frescativägen
More informationMASPECTRAS Users Guide
MASPECTRAS Users Guide In this user guide every page and functionality is described in detail. To work with MASPECTRAS it is not necessary to read the whole document, because many things work similar to
More informationS. S. JAIN SUBODH P. G. (Autonomous) COLLEGE, JAIPUR FACULTY OF SCIENCE TIME TABLE B.Sc. Semester- I w.e.f
AR.N.301 8 A. 8.55A. 4,5,6 M- SG 1-3 M- DG 9 A. 9.55 A. 3,4 PHY FK 1.2 PHY MES 5,6 HND US S. S. JAN SUBODH P. G. (Autonomous) COLLEGE, JAPUR B.Sc. Semester- w.e.f. 18.07.16 10 A. 10.55 A. 5,6 RN 3,4 NJ
More informationPackage MSGFplus. April 1, 2019
Type Package Title An interface between R and MS-GF+ Version 1.16.1 Date 2017-06-19 Author Thomas Lin Pedersen Package MSGFplus April 1, 2019 Maintainer Thomas Lin Pedersen This package
More informationSupporting Information. Investigating the Nature of Palladium Chain-Walking in the Enantioselective Redox-Relay Heck Reaction of Alkenyl Alcohols
Supporting Information Investigating the Nature of Palladium Chain-Walking in the Enantioselective Redox-Relay eck Reaction of lkenyl lcohols Margaret J. ilton, 1 Li-Ping Xu, 2 Per-Ola Norrby, 3 Yun-ong
More informationUser Manual MarkerView Software User Manual Revision: February, 2010
User Manual MarkerView 1.2.1 Software User Manual - 1 - Revision: February, 2010 This document is provided to customers who have purchased AB SCIEX equipment to use in the operation of such AB SCIEX equipment.
More informationCorra v2.0 User s Guide
Corra v2.0 User s Guide Corra is an open source software Licensed under the Apache License, Version 2.0 and it s source code, demo data and this guide can be downloaded at the http://tools.proteomecenter.org/corra/corra.html.
More informationSoftware Tools for Network Modelling
6 th International Conference on Applied Informatics Eger, Hungary, January 27 31, 2004. Software Tools for Network Modelling Attila Kuki a, János Sztrik b, Günter Bolch c a Department of Information Technology
More informationTutorial EN
Tutorial 8.102.8001EN Metrohm AG CH-9101 Herisau Switzerland Phone +41 71 353 85 85 Fax +41 71 353 89 01 info@metrohm.com www.metrohm.com Tutorial 8.102.8001EN 07.2009 ek Teachware Metrohm AG CH-9101
More informationTitrIC Vario pro. Multi parameter analysis by titration and ion chromatography combined
TitrIC Vario pro Multi parameter analysis by titration and ion chromatography combined TitrIC Vario pro the dream team for comprehensive ion analysis 02 Comprehensive analysis of ionic components in liquid
More informationLibrary. RSC Publishing. a step-by-step guide
Erika Delbecque Library Section name RSC Publishing a step-by-step guide This guide will take you through searching the RSC Publishing platform, where you can find journal articles and e-books on biology,
More informationSupplementary Figure S1. 19 F NMR spectra of the reaction of 5e with XeF 2 in toluene-d 8.
Supplementary Figure S1. 19 F NMR spectra of the reaction of 5e with XeF 2 in toluene-d 8. Supplementary Figure S2. 31 P NMR spectra of 5e and the reaction of 5e with XeF 2 in toluene-d 8. Supplementary
More informationPreston Neighbourhood House
Preston Neighbourhood House Table of Contents Topic 1 Microsoft Word Basics... 2 Basic Tools... 3 Keyboard Movement Commands and Mouse Techniques... 5 Customising the Quick Access Toolbar... 5 Selection
More informationMTP SmallAnchor Targets BC
Instructions for Use MTP SmallAnchor Targets BC Polished steel targets with hydrophilic sample and calibrant spots surrounded by a hydrophobic barrier for MALDI sample preparation CARE products are designed
More informationPathway Analysis of Untargeted Metabolomics Data using the MS Peaks to Pathways Module
Pathway Analysis of Untargeted Metabolomics Data using the MS Peaks to Pathways Module By: Jasmine Chong, Jeff Xia Date: 14/02/2018 The aim of this tutorial is to demonstrate how the MS Peaks to Pathways
More informationProgenesis CoMet User Guide
Progenesis CoMet User Guide Analysis workflow guidelines for version 1.0 Contents Introduction... 3 How to use this document... 3 How can I analyse my own runs using CoMet?... 3 LC-MS Data used in this
More informationUsing I9131 Sodium Combination ISE on 3200I/M
Overview Using I9131 Sodium Combination ISE on 3200I/M This document demonstrates how to use I9131 Sodium Combination ISE on 3200I or 3200 M to measure pna or the concentration of [Na + ]. Applied to 3200I
More informationTutorial 7: Automated Peak Picking in Skyline
Tutorial 7: Automated Peak Picking in Skyline Skyline now supports the ability to create custom advanced peak picking and scoring models for both selected reaction monitoring (SRM) and data-independent
More informationDe Novo Pipeline : Automated identification by De Novo interpretation of MS/MS spectra
De Novo Pipeline : Automated identification by De Novo interpretation of MS/MS spectra Benoit Valot valot@moulon.inra.fr PAPPSO - http://pappso.inra.fr/ 29 October 2010 Abstract The classical method for
More informationSPECTRUM. The world s first fully automated Raman AFM. AFM - confocal Raman - SNOM - TERS AFM KPFM. Raman. AFM-Raman characterization of PS-PVAC
Raman KPFM AFM AFM-Raman characterization of PS-PVAC polymer blend film SPECTRUM The world s first fully automated Raman AFM AFM - confocal Raman - SNOM - TERS The first fully integrated & automated AFM
More informationPackage HiResTEC. August 7, 2018
Type Package Package HiResTEC August 7, 2018 Title Non-Targeted Fluxomics on High-Resolution Mass-Spectrometry Data Version 0.54 Date 2018-08-07 Maintainer Jan Lisec Identifying labeled
More informationSearching and ranking similar clusters of polyhedra in inorganic crystal structures
Searching and ranking similar clusters of polyhedra in inorganic crystal structures Hans-Joachim Klein Institut f. Informatik Christian-Albrechts-Universität Kiel Germany 2 Definition: A crystal is an
More informationPROJECT Elmarknadshubb DATE DRAFT VERSION /1263. Elmarknadshubb. BRS-SE-611 Register meter value 1/12
PROJECT Elmarknadshubb DATE 2018-01-11 DRAFT VERSION ENGLISH DRAFT VERSION ÄRENDENUMMER 1. 0 2015/1263 Elmarknadshubb BRS-SE-611 Register meter value 1/12 About this document Updates Release Change note
More informationDepth analysis for laminated film by confocal Raman mapping
Newest modular 3D Imaging Raman Microspectroscopy System Simple operation and low cost with all the basic features of our top of the line system. Structural images of transparent samples (plastic, film,
More informationDe Novo Peptide Identification
De Novo Peptide Identification When a suitable sequence database is not available for your sample of interest, identification of your acquired fragmentation mass spectra becomes quite difficult. Indeed,
More informationSupporting Information. for. TEMPO-derived spin labels linked to the nucleobases. adenine and cytosine for probing local structural
Supporting Information for TEMPO-derived spin labels linked to the nucleobases adenine and cytosine for probing local structural perturbations in DNA by EPR spectroscopy Dnyaneshwar B. Gophane and Snorri
More informationHow to Create a Substance Answer Set
How to Create a Substance Answer Set Select among five search techniques to find substances Substances can be described by multiple names or other characteristics, so SciFinder gives you the flexibility
More informationFT-ICR MS in the analysis of IgA Nephropathy
FT-ICR MS in the analysis of IgA Nephropathy Matthew B. Renfrow March 7, 007 Finnigan LTQ FT-ICR Mass Spectrometer Ion Trap based Fourier Transform-Ion Cyclotron Mass Spectrometer FT-ICR @ LC timescale
More informationmmass 3.2 User s Guide written by Martin Strohalm version 1.3
mmass 3.2 User s Guide written by Martin Strohalm version 1.3 Contents 1. Preface... 5 1.1. Motivation... 5 1.2. Authors... 5 1.3. Typographical Conventions... 6 1.4. Technicalities... 6 1.5. License...
More informationWe are painfully aware that we don't have a good, introductory tutorial for Mascot on our web site. Its something that has come up in discussions
We are painfully aware that we don't have a good, introductory tutorial for Mascot on our web site. Its something that has come up in discussions many times, and we always resolve to do something but then
More informationSat 13:45 AMS Upgrades
Sat 13:45 AMS Upgrades eptof - Efficient Particle Time-of-Flight ADQ1600, Custom data acquisition card PM2.5 Lens Capture vaporizer Auto tuning software for mass spectrometer Efficient Particle Time-of-Flight
More informationPackage RMassBank. October 9, 2013
Package RMassBank October 9, 2013 Type Package Title Workflow to process tandem MS files and build MassBank records Version 1.2.1 Author Michael Stravs, Emma Schymanski Maintainer Michael Stravs, Emma
More informationBIOINF 4399B Computational Proteomics and Metabolomics
BIOINF 4399B Computational Proteomics and Metabolomics Sven Nahnsen WS 13/14 6. Quantification Part II Overview Label-free quantification Definition of features Feature finding on centroided data Absolute
More informationOverview of updates to PAG Activities 1 st February 2016
Overview of updates to PAG Activities 1 st February 2016 Please find below a centralised copy of the sections of the Chemistry PAG Activities sheets as a quick reference to current versions and the changes
More informationTable S1 Comparison of CypA observed Bragg data vs. calculated from Normal Modes.
Table S1 Comparison of CypA observed Bragg data vs. calculated from Normal Modes. Resolution (Å) R-factor CC 44.560-11.070 0.5713 0.4144 11.070-8.698 0.3325 0.6957 8.697-6.834 0.2987 0.7324 6.831-5.369
More informationAgilent MassHunter Metabolite ID Software. Installation and Getting Started Guide
Agilent MassHunter Metabolite ID Software Installation and Getting Started Guide Notices Agilent Technologies, Inc. 2011 No part of this manual may be reproduced in any form or by any means (including
More informationSupporting information for the manuscript
Electronic Supplementary Material (ESI) for Chemical Science. This journal is The Royal Society of Chemistry 2019 Supporting information for the manuscript Facile N-functionalization and strong magnetic
More informationMALDI Software Users Guide (simplified version)
MALDI Software Users Guide (simplified version) Central Analytical Lab Ekeley E266 The Acquisition program is called Voyager Control Panel. Once you shoot your sample and determine it looks good, you transfer
More informationa ae (Chemi m cal bon o d)
a ae (Chemical bond) å å å a a ooo i o i a ao e e e a ao a a å å å å o æ e и å o e u и 2 ae o æ e и å o e u ( a å o u å o ooo ) æ a ao a a ao e e a a ooo i æ e и a å o e u æ a a o e æ a å a æ o o å å å
More informationFrench Creek Software, Inc. Quick Start Guide
French Creek Software, Inc Quick Start Guide Inside This Guide Section 1: Setup - Overview & Install 4 Software Overview System Requirements 5 Installation Section 2: Getting Around - Get to Modeling 7
More informationHiQ sil TM HPLC Columns
www.kromatek.co.uk KYA Technologies of Japan KYA Technologies Corporation, Tokyo, Japan established in 1998 to develop a range of HPLC products. The latest product HiQ sil HS is a high performance silica
More informationChromeleon / MSQ Plus Operator s Guide Document No Revision 03 October 2009
MSQ Plus Chromeleon / MSQ Plus Operator s Guide Document No. 065322 Revision 03 October 2009 Chromeleon / MSQ Plus Operator s Guide 2009 by Dionex Corporation All rights reserved worldwide. Printed in
More information