This is an important a-empt (one of the first in the US) to rebalance the rela8onships between publishers, academic ins8tu8ons, funders, and
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2 This is an important a-empt (one of the first in the US) to rebalance the rela8onships between publishers, academic ins8tu8ons, funders, and individual researchers in workflows surrounding the publishing process. - Clifford Lynch
3 Public Access Submission System (PASS) Supports simultaneous submission of ar8cles to PubMedCentral and ins8tu8onal repository Aligns funding agency public access policy compliance and ins8tu8onal open access policy compliance Raises mo8va8on and reduces burden for researchers Embeds ar8cle (and data) deposit into exis8ng research workflows Offers framework for ins8tu8onal data analy8cs, par8cularly related to grants data
4 Researcher Submission Direct submission by faculty member or principal inves8gator
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16 Proxy or Delegate Submission Submission prepared by proxy or delegate ( preparer ) with final review/approval by faculty member or principal inves8gator ( submimer )
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33 Approval of proxy submission Faculty or principal inves8gator ( submimer ) reviews/approves submission prepared by proxy or delegate ( preparer )
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43 Key Technologies (and principles)
44 Deposit Services Single-pageapp UI PASS repository/registry Loaders Open access repositories
45 Single-page app UI (Ember) Download html + js once UI is en8rely on client side via javascript Reads/writes data (business objects) via some sort of hmp CRUD API
46 Fedora Provides a suitable REST API out of the box: LDP (Linked Data PlaVorm) Simple adapter for Ember Linked data (JSON-LD) Binaries Message queue for async services, e.g. Deposit, No8fica8on ( ) WebAC authoriza8on via ACLs Protected by Shibboleth
47 Shibboleth Browser needs to be logged in to your ins8tu8on s Iden8ty provider PASS at JHU is part of InCommon federa8on Only requests from par8cipa8ng ins8tu8ons ever make it to Fedora Shibboleth amributes form the basis of authoriza8on decisions
48 Authorization What Shibboleth does: Enforce login & release amributes (e.g. domain [johnshopkins.edu], name, , etc) What PASS does (according to policy) Translate shibboleth amributes to roles hmp://oa-pass.org/ns/roles/johnshopkins.edu#submimer Create ACLs to protect PASS resources based on role only submimers from johnshopkins.edu can create a submission in /fcrepo/rest/submissions only the grant loader applica8on can create or write to /fcrepo/rest/grants only this specific user can edit /fcrepo/rest/submissions/abc123 What Fedora does: Enforces read/write/append based on ACLs
49 Technology End Result Design, implementa8on, and release to produc8on in five (intense!) months Aher a quick proof-of-concept mock up for demonstra8on Leverage strengths of key technologies Ember: Rapid UI development Enlisted help of outside consultants from 221B Shibboleth: trusted for security, ubiquitous among universi8es Fedora: REST API, Authoriza8on, Binary storage, async messaging out of the box Docker: test locally, deploy as stateless containers in AWS for produc8on Poised to take on mul8-ins8tu8on and/or hosted use cases beyond JHU
50 Further Information and Road Map hmp://pass.jhu.edu/ hmps://bit.ly/oa-pass Pilot effort at Harvard and user tes8ng at MIT Integra8on with addi8onal funding agencies beyond those using PMC Data archive Unpaywall API integra8on for iden8fying ar8cles Interoperability with faculty profile systems
51 LOCALLY RUN Data THIRD PARTIES GLOBUS MARCC & IDIES Existing Workflow Future workflow DATA TRUST Final Peer-reviewed Manuscripts PASS RMap Final Peer-reviewed Manuscripts PUBMED, JScholarship, DASH, etc. RMap Metadata Manuscripts Metadata Open Journal Systems, CHRONOS, JISC Publication Router, etc Health Sciences Data FEDORA RMap COLLECTIONS ISLANDORA IIIF VIEWER
52 Acknowledgements Johns Hopkins University (JHU) President s Office and Sheridan Libraries for funding JHU Vice Provost for Research Amazing sohware developers at Sheridan Libraries and 221B Harvard University (Peter Suber), MIT (Ellen Finnie and Heather Yager), with inspira8on from Jeff Spies Last but certainly not least Na8onal Library of Medicine Jerry Sheehan, Ka8e Funk, and Pierce Smith
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