Core Technology Development Team Meeting
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1 Core Technology Development Team Meeting To hear the meeting, you must call in Toll-free phone number: Access Code: For international call in numbers, please visit:
2 Agenda Updates on action items Feature/Work list for v2.0 release List of repositories to be indexed Updates from all team members Supported by the NIH grant 1U24 AI to the University of California, San Diego 2
3 Updates- action items Generate a HELP and FAQ page please start adding material here ASAP; FAQ from review is being generatedhttps://docs.google.com/document/d/1sczm976jc8wn hyfvysokvwuucjojdg914lqaftraiqg/edit Updating of Index on 01/16/2017 for process evaluation HeHTm7HlWdWKkZzRw_ymE45N9qiLvr4/edit#gid= updates? Complete re-indexing before with updated NLP pipeline Supported by the NIH grant 1U24 AI to the University of California, San Diego 3
4 Feature/Work list for v2.0 release MrIH6aHtKn3V3HACBYGt62n2eU38U7MYfc/edit#gid= Release date for v2.0 February 28 th Testing February 16 th Plan for a June/July potentially final version release, should be well documented Supported by the NIH grant 1U24 AI to the University of California, San Diego 4
5 Website optimization for discovery by search engines Redesign website logo container to reflect project slogan. Decide on main search keywords. Update Page Titles Improve Meta Description Review biocaddie Google Analytics Improve page content sing Keywords and synonyms Implement Robot.txt File Consider <meta name="robots content= noindex > Meta Tag Use crawlers to find target URLs Create an XML Sitemap Implement SSL Certificate for Https (Already implemented by Ergin) [Done] Add structured data schema.org markup Supported by the NIH grant 1U24 AI to the University of California, San Diego 5
6 Github Issues Total Issues 239 Number Open 112 Number Closed 127 Supported by the NIH grant 1U24 AI to the University of California, San Diego 6
7 Ongoing work Task Status 1 Metadata Ingestion 1.1 Import repositories expansion Ongoing 1.2 Data repository suggestion form at DataMed George/Xiaoling / Sanda Ongoing 1.3 Metadata mapping review/ reconciliation between curators Ongoing 1.4 Metadata management Ongoing 1.5 Indexing Ongoing 1.6 NLP-based/terminology server indexing : Gene/protein, Disease, Drug/chemical, Biological Implemented at backend process, Organism, Format, Access, Cell types 1.7 Bulk download of indices Not Started 2 Interface Design 2.1 Design interface usability issues Ongoing 2.2 Display most Accessed Datasets Not Started Supported by the NIH grant 1U24 AI to the University of California, San Diego 7
8 Ongoing work Task Status 3 Personalized search 3.1 Improve the tracking system Ongoing 4 Searching/Ranking algorithms 4.1 Similar datasets to be expanded Ongoing 5 Display of results 5.1 Sort datasets author, published date, repository, title Ongoing 5.2 What fields should be displayed? Ongoing Additional filters: File type Data Restrictions (data use agreement, restricted, unrestricted) Data Level (participant/aggregate) 5.3 Population (mouse, human, etc) 6 Link to external resources 1. Pubmed: click through to pubmed records of citing publications: copy citation to clipboard Scholix Framework for Linking Data and Literature 3. Linkout Not started Not Started Implemented Supported by the NIH grant 1U24 AI to the University of California, San Diego 8
9 Ongoing work Task Status 7 Documentation 7.1 Source code Ongoing 7.2 Tutorials Not Started 7.3 Help menu Ongoing 7.4 Video Ongoing 8 Usability studies 8.1 User studies Ongoing Data Duplication issue: best display/represention of the duplicate in the metadata records and workflow for displaying the duplicates in the metadata records Jeff/Anu Additional field in index tagging the dataset as duplicate Display the dataset and list repos underneath 9 10 Relationship Network Graph 11 Collaborative research support Supported by the NIH grant 1U24 AI to the University of California, San Diego 9
10 Other issues Please deposit codes in GitHub. Please contact me at if you need access hp Any other issues? Thank You
Core Technology Development Team Meeting
Core Technology Development Team Meeting To hear the meeting, you must call in Toll-free phone number: 1-866-740-1260 Access Code: 2201876 For international call in numbers, please visit: https://www.readytalk.com/account-administration/international-numbers
Core Technology Development Team Meeting
Core Technology Development Team Meeting To hear the meeting, you must call in Toll-free phone number: 1-866-740-1260 Access Code: 2201876 For international call in numbers, please visit: https://www.readytalk.com/account-administration/international-numbers
Core Technology Development Team Meeting
Core Technology Development Team Meeting To hear the meeting, you must call in Toll-free phone number: 1-866-740-1260 Access Code: 2201876 For international call in numbers, please visit: https://www.readytalk.com/account-administration/international-numbers
Core Technology Development Team Meeting
Core Technology Development Team Meeting To hear the meeting, you must call in Toll-free phone number: 1-866-740-1260 Access Code: 2201876 For international call in numbers, please visit: https://www.readytalk.com/account-administration/international-numbers
Core Technology Development Team Meeting
Core Technology Development Team Meeting To hear the meeting, you must call in Toll-free phone number: 1-866-740-1260 Access Code: 2201876 For international call in numbers, please visit: https://www.readytalk.com/account-administration/international-numbers
Core Technology Development Team Meeting
Core Technology Development Team Meeting To hear the meeting, you must call in Toll-free phone number: 1-866-740-1260 Access Code: 2201876 For international call in numbers, please visit: https://www.readytalk.com/account-administration/international-numbers
Core Technology Development Team Meeting
Core Technology Development Team Meeting To hear the meeting, you must call in Toll-free phone number: 1-866-740-1260 Access Code: 2201876 For international call in numbers, please visit: https://www.readytalk.com/account-administration/international-numbers
Core Technology Development Team Meeting
Core Technology Development Team Meeting To hear the meeting, you must call in Toll-free phone number: 1-866-740-1260 Access Code: 2201876 For international call in numbers, please visit: https://www.readytalk.com/account-administration/international-numbers
Core Technology Development Team Meeting
Core Technology Development Team Meeting To hear the meeting, you must call in Toll-free phone number: 1-866-740-1260 Access Code: 2201876 For international call in numbers, please visit: https://www.readytalk.com/account-administration/international-numbers
Core Technology Development Team Meeting
Core Technology Development Team Meeting To hear the meeting, you must call in Toll-free phone number: 1-866-740-1260 Access Code: 2201876 For international call in numbers, please visit: https://www.readytalk.com/account-administration/international-numbers
Core Technology Development Team Meeting
Core Technology Development Team Meeting To hear the meeting, you must call in Toll-free phone number: 1-866-740-1260 Access Code: 2201876 For international call in numbers, please visit: https://www.readytalk.com/account-administration/international-numbers
Core Technology Development Team Meeting
Core Technology Development Team Meeting To hear the meeting, you must call in Toll-free phone number: 1-866-740-1260 Access Code: 2201876 For international call in numbers, please visit: https://www.readytalk.com/account-administration/international-numbers
Core Technology Development Team Meeting
Core Technology Development Team Meeting To hear the meeting, you must call in Toll-free phone number: 1-866-740-1260 Access Code: 2201876 For international call in numbers, please visit: https://www.readytalk.com/account-administration/international-numbers
Core Technology Development Team Meeting
Core Technology Development Team Meeting To hear the meeting, you must call in Toll-free phone number: 1-866-740-1260 Access Code: 2201876 For international call in numbers, please visit: https://www.readytalk.com/account-administration/international-numbers
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Core Technology Development Team Meeting
Core Technology Development Team Meeting To hear the meeting, you must call in Toll-free phone number: 1-866-740-1260 Access Code: 2201876 For international call in numbers, please visit: https://www.readytalk.com/account-administration/international-numbers
Core Technology Development Team Meeting
Core Technology Development Team Meeting To hear the meeting, you must call in Toll-free phone number: 1-866-740-1260 Access Code: 2201876 For international call in numbers, please visit: https://www.readytalk.com/account-administration/international-numbers
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Executive Committee Meeting
Executive Committee Meeting To hear the meeting, you must call in Toll-free phone number: 1-866-740-1260 Access Code: 2201876 For international call in numbers, please visit: https://www.readytalk.com/account-administration/international-numbers
Executive Committee Meeting
Executive Committee Meeting To hear the meeting, you must call in Toll-free phone number: 1-866-740-1260 Access Code: 2201876 For international call in numbers, please visit: https://www.readytalk.com/account-administration/international-numbers
Core Technology Development Team Meeting
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Steering Committee Meeting
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Steering Committee Meeting
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