Welcome - webinar instructions

Transcription

1 Welcome - webinar instructions GoToTraining works best in Chrome or IE avoid Firefox due to audio issues with Macs To access the full features of GoToTraining, use the desktop version by clicking switch to desktop version All microphones will be muted whilst the trainer is speaking If you have a question please use the chat box at the bottom of the GoToTraining window Please complete the feedback survey which will launch at the end of the webinar.

2 Introduction to EMBL-EBI resources Webinar 1 February, 2017 Tom Hancocks & Melissa Burke Training Team courses@ebi.ac.uk

3 EMBL-EBI staff Tom Hancocks Melissa Burke Jenny Cham

4 European Molecular Biology Laboratory Heidelberg Hamburg Hinxton Basic research EMBL staff Structural biology Grenoble Bioinformatics Monterotondo 1800 people 60+ nationalities Structural biology Mouse biology

5 EMBL member states Austria, Belgium, Croatia, Czech Republic, Denmark, Finland, France, Germany, Greece, Iceland, Ireland, Israel, Italy, Luxembourg, the Netherlands, Norway, Portugal, Spain, Sweden, Switzerland and the United Kingdom Prospective member states Poland, Slovakia, Hungary Associate member states Argentina, Australia Prospect member states: Hungary, Poland, Slovak Republic

6 OUR MISSION Services Research Training Industry Coordination

7 Our services Arranged in clusters Explore your subject or data type of interest

8 Our research Genes, genomes & variation Paul Flicek Ewan Birney Moritz Gerstung Proteins & macromolecular structures Nick Goldman Gerard Kleywegt Janet Thornton New Leaders in 2017 Alex Bateman Zamin Iqbal Gene, protein & metabolite expression Chemical biology Pathways, systems Eva Petsalaki Anton Enright Oliver Stegle John Marioni Alvis Brazma Christoph Steinbeck Pedro Beltrao

9 Our training

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12 Why register? Access quizzes Tutorials Track your learning Webinars Pick up where you left off Quick tours Be the first to know Conceptual courses

13 Industry Programme at EMBL-EBI

14 What do we do? Biological data provision

15 Big data, big demand ~18.5 million requests to EMBL-EBI websites every day Scientists at over 5 million unique sites use EMBL-EBI websites EMBL-EBI handles 9.2 million jobs on average per month 60 petabytes of EMBL-EBI storage capacity

16 Photo credit: Des Higgins

17 Big data, big demand 200GB in TB in PB in TB of data DVDs US Library of Congress year of data at LHC!

18 Provide tools EMBL-EBI s data cycle Archive Analyse Share Classify

19 Data resources at EMBL-EBI Genes, genomes & variation European Nucleotide Archive European Variation Archive Ensembl Ensembl Genomes GWAS Catalog Metagenomics Portal European Genome-phenome Archive Gene, protein & metabolite expression Systems d g P Cross domain resources. Cross domain resources s RNA Central ArrayExpress Expression Atlas Metabolights PRIDE BioModels BioSamples Enzyme Portal IntAct Reactome b y Protein sequences, families & motifs InterPro Pfam UniProt Molecular structures Protein Data Bank in Europe Electron Microscopy Data Bank Literature & ontologies Chemical biology Europe PubMed Central Gene Ontology Experimental Factor Ontology ChEMBL SureChEMB ChEBI

20 Database interactions Collaborative community facilitates social, scientific and technical interactions Right: internal interactions between data resources as determined by the exchange of data. Width of each internal arc weighted according to the number of different data types exchanged.

21 Our users

22 Navigating the EBI

23 Poll question! Have you used an EMBL-EBI resource before?

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31 Where to get help?

32 Social Follow for updates on training courses and Follow us for updates and news about EBI twitter.com/emblebi/lists/embl-ebi-tweeties EBI twitterati facebook.com/emblebi Like us for course and event pictures from EBI

33 Acknowledgements

34 Upcoming webinars See the full list of upcoming webinars at Feedback survey Tell us what you think

35 Thank you for listening! Any questions?