Page 1 of 9. Protocol: adult_other_adni3basichumanprotocol25x_ _ _1. 3 Plane Localizer. 3 Plane Localizer PATIENT POSITION

Size: px
Start display at page:

Download "Page 1 of 9. Protocol: adult_other_adni3basichumanprotocol25x_ _ _1. 3 Plane Localizer. 3 Plane Localizer PATIENT POSITION"

Transcription

1 3 Localizer FOV 26.0 Slice Thickness 5.0 Slice Spacing 0.0 Freq 256 Phase PLANE 3 Localizer Unswap Phase Correction Gradient Echo Imaging Options Seq, Fast Recon All Images 3 Localizer Pause / SCIC Page 1 of 9

2 Calibration Scan Number of Echoes 1 Calibration Scan 3D SPGR Imaging Options EDR, Fast, ZIP2, Calib FOV 30.0 Slice Thickness 9.4 R/L Phase Correction Calibration Scan Recon All Images Contrast Yes/ Pause / SCIC Page 2 of 9

3 Accelerated Sagittal IR-FSPGR Flip Angle 11 TE TI 400 SAGITTAL Accelerated Sagittal IR- FSPGR Min Full Receiver Bandwidth Pause / SCIC 2 3D SPGR Imaging Options EDR, Fast, IrP, Asset FOV 25.6 Slice Thickness 1.0 Location per Slab 200 Overlap Locations 0 Freq 256 Phase 256 S/I Phase Correction User CV User CV Recon All Images Accelerated Sagittal IR-FSPGR Please do not oblique. Please do not reduce the number of slices. Please do not adjust protocol values. Page 3 of 9

4 Sagittal 3D FLAIR SAGITTAL TE TR TI 1473 Echo Train Length 182 Receiver Bandwidth Fat/Water Saturation Pause / SCIC 2 Sagittal 3D FLAIR Fat 3D Cube T2 FLAIR Imaging Options EDR, Fast, IrP, ARC FOV 25.6 Slice Thickness 1.2 Location per Slab 186 Overlap Locations 0 Freq 256 Phase 256 S/I Phase Correction User CV Recon All Images Sagittal 3D FLAIR Please do not oblique. Please do not reduce the number of slices. Please do not adjust protocol values. Page 4 of 9

5 Axial T2 Star Flip Angle 20 TE 20.0 Number of Echoes 1 TR Receiver Bandwidth Recon All Images Contrast Yes/ Axial T2 Star Gradient Echo Imaging Options FC, EDR FOV 22.0 Slice Thickness 4.0 Slice Spacing 0.0 Freq 256 Phase 192 A/P # of Acq. Before Pause 0 Phase Correction Pause / SCIC 2 Axial T2 Star Please do not oblique. Please do not reduce the number of slices. Please do not adjust protocol values. Page 5 of 9

6 Axial 3D pcasl (Eyes Open) 3D 3DASL Imaging Options EDR, Fast, Spiral FOV 24.0 Slice Thickness 4.0 Axial 3D pcasl (Eyes Open) Receiver Bandwidth Delay after Acquisition without AV Pause / SCIC 0 Tips: -When prescribing the 3D slab, the bottom of the slab should be positioned at the bottom of the cerebellum Freq 512 Phase 8 R/L NEX 3.00 Phase Correction Recon All Images Axial 3D pcasl (Eyes Open) Page 6 of 9

7 TE Axial DTI Minimum TR Number of Shots 1 Spin Echo Imaging Options EPI, DIFF, Asset FOV 23.2 Slice Thickness 2.0 Slice Spacing 0.0 Freq 116 Phase 116 R/L Phase Correction Yes Axial DTI Fat/Water Saturation Pause / SCIC 2 Fat Please do not oblique. Please do not reduce the number of slices. Please do not adjust protocol values. User CV User CV Optimized TE Diffusion Directions Number of Diffusion Directions Number of T2 Images 6 Dual Spin Echo Diffusion Tenser Processing Output Recon All Images Contrast Yes/ Yes Tensor 48 Selection Axial DTI Page 7 of 9

8 Flip Angle 90 TE 30.0 TR Number of Shots 1 Axial rsfmri (Eyes Open) Gradient Echo Imaging Options MPh, EPI FOV 22.0 Slice Thickness 3.4 Slice Spacing 0.0 Freq 64 Phase 64 R/L Phase Correction Yes Axial rsfmri (Eyes Open) Initial State Fat/Water Saturation Pause / SCIC Control Fat *Instruct patient to keep eyes open during this scan and to focus on 1 spot. Cover brain in one acq, ensure slab is positioned from inferior to superior. Must have 48 slices, please do not subtract or add any slices. Do not oblique slices. (Do not change series descritpion) User CV Slice per Location 200 Phase Acquisition Order Delay after Acquisition Delay after Acquisition without AV Recon All Images Contrast Yes/ Minimum 2 Axial rsfmri (Eyes Open) Page 8 of 9

9 HighResHippo Flip Angle 122 TE 50.0 Number of Echoes 1 OBLIQUE TR Echo Train Length 15 Receiver Bandwidth Pause / SCIC 2 HighResHippo FSE-XL Imaging Options Fast, Asset FOV 17.5 Slice Thickness 2.0 Slice Spacing Intleave Freq 448 Phase 448 S/I Fat Shift DIR rmal (I) # of Acq. Before Pause 0 Phase Correction Yes User CV Recon All Images HighResHippo Angle the slices perpendicular to the hippocampul body. Please refer to the study manual for further details. Page 9 of 9

Table of Contents MRI Neuro protocols

Table of Contents MRI Neuro protocols Table of Contents MRI Neuro protocols 1. MRI Soft-tissue neck 2. MRI Head: a. Head with and without contrast b. Perfusion post processing c. CSF flow analysis d. Deep brain stimulator e. Brain spectroscopy

More information

Philips MRI Protocol Dump Created on Comment Software Stream

Philips MRI Protocol Dump Created on Comment Software Stream Page 1 of 5 Philips MRI Protocol Dump Created on 2/17/2011 4:11:01 PM Comment Created by ExamCard_to_XML with inputs: "J:\ADNI GO - ADNI 2 Phantom5.ExamCard" on system (BU SCHOOL OF MEDICINE :: 192.168.71.10)

More information

ADNI GO - ADNI 2 Human7 (9) 38:30.1

ADNI GO - ADNI 2 Human7 (9) 38:30.1 Philips RI Protocol Dump Create on 11/25/2013 11:40:24 A Comment Create by ExamCar_to_XL with inputs: "K:\ADNI GO - ADNI 2 Human7.ExamCar" on system (BU SCHOOL OF EDICINE :: 192.168.71.10) Software Stream

More information

COBRE Scan Information

COBRE Scan Information COBRE Scan Information Below is more information on the directory structure for the COBRE imaging data. Also below are the imaging parameters for each series. Directory structure: var/www/html/dropbox/1139_anonymized/human:

More information

ADNI, ADNI_QH, SURVEY. Geometry. connection

ADNI, ADNI_QH, SURVEY. Geometry. connection ADNI, ADNI_QH, SURVEY Geometry Coil selection = Head connection = d Multi coil Homogeneity correction ne FOV (mm) = 250.00 RFOV (%) = 100.00 Foldover suppression Matrix scan = 256 reconstruction = 256

More information

Error! Bookmark not defined. Error! Bookmark not defined.

Error! Bookmark not defined. Error! Bookmark not defined. MRI-Neuro Protocols Brain Protocols... 2 WITH AND WITHOUT... 3 WITHOUT CONTRT... 4 HHT... 5 MS WITH AND WITHOUT CONTRT... 6 MS WITHOUT CONTRT... 7 PEDIATRIC... 8 PEDIATRIC WITH CONTRT... 9 PITUITARY NO

More information

GE Healthcare CLINICAL GALLERY. Discovery * MR750w 3.0T. This brochure is intended for European healthcare professionals.

GE Healthcare CLINICAL GALLERY. Discovery * MR750w 3.0T. This brochure is intended for European healthcare professionals. GE Healthcare CLINICAL GALLERY Discovery * MR750w 3.0T This brochure is intended for European healthcare professionals. NEURO PROPELLER delivers high resolution, motion insensitive imaging in all planes.

More information

SIEMENS MAGNETOM Skyra syngo MR D13

SIEMENS MAGNETOM Skyra syngo MR D13 Page 1 of 8 SIEMENS MAGNETOM Skyra syngo MR D13 \\USER\CIND\StudyProtocols\PTSA\*dm_ep2d_mono70_b0_p2_iso2.0 TA:1:05 PAT:2 Voxel size:2.0 2.0 2.0 mm Rel. SNR:1.00 :epse Properties Routine Prio Recon Load

More information

SIEMENS MAGNETOM TrioTim syngo MR B17

SIEMENS MAGNETOM TrioTim syngo MR B17 \\USER\KNARRGROUP\MultiBand\LavretskyMultiBand\trufi localizer 3-plane TA: 5.1 s PAT: Voxel size: 1.2 1.2 5. Rel. SNR: 1.00 SIEMENS: trufi Load to stamp Slice group 1 Slices 1 Dist. factor 20 % Phase enc.

More information

SIEMENS MAGNETOM Avanto syngo MR B15

SIEMENS MAGNETOM Avanto syngo MR B15 \\USER\INVESTIGATORS\Ravi\ADNI-Subject\Localizer TA: 0:10 PAT: Voxel size: 1.9 1.5 8.0 mm Rel. SNR: 1.00 SIEMENS: gre Properties Prio Recon Before measurement After measurement Load to viewer Inline movie

More information

SIEMENS MAGNETOM Avanto syngo MR B15

SIEMENS MAGNETOM Avanto syngo MR B15 \\USER\INVESTIGATORS\Ravi\ADNI-phantom\QC Phantom-Localizer TA: 0:10 PAT: Voxel size: 1.9 1.5 8.0 mm Rel. SNR: 1.00 SIEMENS: gre Properties Prio Recon Before measurement After measurement Load to viewer

More information

Lucy Phantom MR Grid Evaluation

Lucy Phantom MR Grid Evaluation Lucy Phantom MR Grid Evaluation Anil Sethi, PhD Loyola University Medical Center, Maywood, IL 60153 November 2015 I. Introduction: The MR distortion grid, used as an insert with Lucy 3D QA phantom, is

More information

SIEMENS MAGNETOM Verio syngo MR B15V

SIEMENS MAGNETOM Verio syngo MR B15V \\USER\ZAHID_RESEARCH\MS\No Name\3D SWI TA: 6:39 PAT: 2 Voxel size: 1.0 0.5 2.0 mm Rel. SNR: 1.00 SIEMENS: gre Properties Prio Recon Before measurement After measurement Load to viewer Inline movie Auto

More information

MRI Physics II: Gradients, Imaging

MRI Physics II: Gradients, Imaging MRI Physics II: Gradients, Imaging Douglas C., Ph.D. Dept. of Biomedical Engineering University of Michigan, Ann Arbor Magnetic Fields in MRI B 0 The main magnetic field. Always on (0.5-7 T) Magnetizes

More information

SIEMENS MAGNETOM Verio syngo MR B17

SIEMENS MAGNETOM Verio syngo MR B17 \\USER\Dr. Behrmann\routine\Ilan\ep2d_bold_PMU_resting TA: 8:06 PAT: Voxel size: 3.03.03.0 mm Rel. SNR: 1.00 USER: ep2d_bold_pmu Properties Special sat. Prio Recon System Before measurement Body After

More information

ACQUIRING AND PROCESSING SUSCEPTIBILITY WEIGHTED IMAGING (SWI) DATA ON GE 3.0T

ACQUIRING AND PROCESSING SUSCEPTIBILITY WEIGHTED IMAGING (SWI) DATA ON GE 3.0T ACQUIRING AND PROCESSING SUSCEPTIBILITY WEIGHTED IMAGING (SWI) DATA ON GE 3.0T Revision date: 12/13/2010 Overview Susceptibility Weighted Imaging (SWI) is a relatively new data acquisition and processing

More information

HST.583 Functional Magnetic Resonance Imaging: Data Acquisition and Analysis Fall 2008

HST.583 Functional Magnetic Resonance Imaging: Data Acquisition and Analysis Fall 2008 MIT OpenCourseWare http://ocw.mit.edu HST.583 Functional Magnetic Resonance Imaging: Data Acquisition and Analysis Fall 2008 For information about citing these materials or our Terms of Use, visit: http://ocw.mit.edu/terms.

More information

Orthopedic MRI Protocols. Philips Panorama HFO

Orthopedic MRI Protocols. Philips Panorama HFO Orthopedic MRI Protocols Philips Panorama HFO 1 2 Prepared in collaboration with Dr. John F. Feller, Medical Director of Desert Medical Imaging, Palm Springs, CA. Desert Medical Imaging will provide the

More information

Lab Location: MRI, B2, Cardinal Carter Wing, St. Michael s Hospital, 30 Bond Street

Lab Location: MRI, B2, Cardinal Carter Wing, St. Michael s Hospital, 30 Bond Street Lab Location: MRI, B2, Cardinal Carter Wing, St. Michael s Hospital, 30 Bond Street MRI is located in the sub basement of CC wing. From Queen or Victoria, follow the baby blue arrows and ride the CC south

More information

Patient Specific. Protocol Identification Number (PID) Must be on each individual. MRI Image

Patient Specific. Protocol Identification Number (PID) Must be on each individual. MRI Image MRI PROCEDURE GUIDELINES Patient Specific Protocol Identification Number (PID) Must be on each individual MRI Image [Protocol 11/04/13, Version 1.4] (Revised 09/03/2014) Page 1 of 72 Abbreviations: BH:

More information

MRI. When to use What sequences. Outline 2012/09/19. Sequence: Definition. Basic Principles: Step 2. Basic Principles: Step 1. Govind Chavhan, MD

MRI. When to use What sequences. Outline 2012/09/19. Sequence: Definition. Basic Principles: Step 2. Basic Principles: Step 1. Govind Chavhan, MD MRI When to use What sequences Govind Chavhan, MD Assistant Professor and Staff Radiologist The Hospital For Sick Children, Toronto Planning Acquisition Post processing Interpretation Patient history and

More information

CHAPTER 9: Magnetic Susceptibility Effects in High Field MRI

CHAPTER 9: Magnetic Susceptibility Effects in High Field MRI Figure 1. In the brain, the gray matter has substantially more blood vessels and capillaries than white matter. The magnified image on the right displays the rich vasculature in gray matter forming porous,

More information

Scan Acceleration with Rapid Gradient-Echo

Scan Acceleration with Rapid Gradient-Echo Scan Acceleration with Rapid Gradient-Echo Hsiao-Wen Chung ( 鍾孝文 ), Ph.D., Professor Dept. Electrical Engineering, National Taiwan Univ. Dept. Radiology, Tri-Service General Hospital 1 of 214 The Need

More information

(a Scrhon5 R2iwd b. P)jc%z 5. ivcr3. 1. I. ZOms Xn,s. 1E IDrAS boms. EE225E/BIOE265 Spring 2013 Principles of MRI. Assignment 8 Solutions

(a Scrhon5 R2iwd b. P)jc%z 5. ivcr3. 1. I. ZOms Xn,s. 1E IDrAS boms. EE225E/BIOE265 Spring 2013 Principles of MRI. Assignment 8 Solutions EE225E/BIOE265 Spring 2013 Principles of MRI Miki Lustig Assignment 8 Solutions 1. Nishimura 7.1 P)jc%z 5 ivcr3. 1. I Due Wednesday April 10th, 2013 (a Scrhon5 R2iwd b 0 ZOms Xn,s r cx > qs 4-4 8ni6 4

More information

Slide 1. Technical Aspects of Quality Control in Magnetic Resonance Imaging. Slide 2. Annual Compliance Testing. of MRI Systems.

Slide 1. Technical Aspects of Quality Control in Magnetic Resonance Imaging. Slide 2. Annual Compliance Testing. of MRI Systems. Slide 1 Technical Aspects of Quality Control in Magnetic Resonance Imaging Slide 2 Compliance Testing of MRI Systems, Ph.D. Department of Radiology Henry Ford Hospital, Detroit, MI Slide 3 Compliance Testing

More information

Fast Imaging UCLA. Class Business. Class Business. Daniel B. Ennis, Ph.D. Magnetic Resonance Research Labs. Tuesday (3/7) from 6-9pm HW #1 HW #2

Fast Imaging UCLA. Class Business. Class Business. Daniel B. Ennis, Ph.D. Magnetic Resonance Research Labs. Tuesday (3/7) from 6-9pm HW #1 HW #2 Fast Imaging Daniel B. Ennis, Ph.D. Magnetic Resonance Research Labs Class Business Tuesday (3/7) from 6-9pm 6:00-7:30pm Groups Avanto Sara Said, Yara Azar, April Pan Skyra Timothy Marcum, Diana Lopez,

More information

Qualitative Comparison of Conventional and Oblique MRI for Detection of Herniated Spinal Discs

Qualitative Comparison of Conventional and Oblique MRI for Detection of Herniated Spinal Discs Qualitative Comparison of Conventional and Oblique MRI for Detection of Herniated Spinal Discs Doug Dean Final Project Presentation ENGN 2500: Medical Image Analysis May 16, 2011 Outline Review of the

More information

New Technology Allows Multiple Image Contrasts in a Single Scan

New Technology Allows Multiple Image Contrasts in a Single Scan These images were acquired with an investigational device. PD T2 T2 FLAIR T1 MAP T1 FLAIR PSIR T1 New Technology Allows Multiple Image Contrasts in a Single Scan MR exams can be time consuming. A typical

More information

HST.583 Functional Magnetic Resonance Imaging: Data Acquisition and Analysis Fall 2008

HST.583 Functional Magnetic Resonance Imaging: Data Acquisition and Analysis Fall 2008 MIT OpenCourseWare http://ocw.mit.edu HST.583 Functional Magnetic Resonance Imaging: Data Acquisition and Analysis Fall 2008 For information about citing these materials or our Terms of Use, visit: http://ocw.mit.edu/terms.

More information

Fast Imaging Trajectories: Non-Cartesian Sampling (1)

Fast Imaging Trajectories: Non-Cartesian Sampling (1) Fast Imaging Trajectories: Non-Cartesian Sampling (1) M229 Advanced Topics in MRI Holden H. Wu, Ph.D. 2018.05.03 Department of Radiological Sciences David Geffen School of Medicine at UCLA Class Business

More information

M R I Physics Course

M R I Physics Course M R I Physics Course Multichannel Technology & Parallel Imaging Nathan Yanasak, Ph.D. Jerry Allison Ph.D. Tom Lavin, B.S. Department of Radiology Medical College of Georgia References: 1) The Physics of

More information

MRI Imaging Options. Frank R. Korosec, Ph.D. Departments of Radiology and Medical Physics University of Wisconsin Madison

MRI Imaging Options. Frank R. Korosec, Ph.D. Departments of Radiology and Medical Physics University of Wisconsin Madison MRI Imaging Options Frank R. Korosec, Ph.D. Departments of Radiolog and Medical Phsics Universit of Wisconsin Madison f.korosec@hosp.wisc.edu As MR imaging becomes more developed, more imaging options

More information

A Virtual MR Scanner for Education

A Virtual MR Scanner for Education A Virtual MR Scanner for Education Hackländer T, Schalla C, Trümper A, Mertens H, Hiltner J, Cramer BM Hospitals of the University Witten/Herdecke, Department of Radiology Wuppertal, Germany Purpose A

More information

Diffusion MRI Acquisition. Karla Miller FMRIB Centre, University of Oxford

Diffusion MRI Acquisition. Karla Miller FMRIB Centre, University of Oxford Diffusion MRI Acquisition Karla Miller FMRIB Centre, University of Oxford karla@fmrib.ox.ac.uk Diffusion Imaging How is diffusion weighting achieved? How is the image acquired? What are the limitations,

More information

HST.583 Functional Magnetic Resonance Imaging: Data Acquisition and Analysis Fall 2006

HST.583 Functional Magnetic Resonance Imaging: Data Acquisition and Analysis Fall 2006 MIT OpenCourseWare http://ocw.mit.edu HST.583 Functional Magnetic Resonance Imaging: Data Acquisition and Analysis Fall 2006 For information about citing these materials or our Terms of Use, visit: http://ocw.mit.edu/terms.

More information

CATNAP User Manual v1.0

CATNAP User Manual v1.0 CATNAP User Manual v1.0 July 6, 2006 Nera-Lee Patel and Bennett Landman Note: Items in green text are only sample value. Your values may be different. I. CreateParManifest -- Creates a spreadsheet to show

More information

HST.583 Functional Magnetic Resonance Imaging: Data Acquisition and Analysis Fall 2008

HST.583 Functional Magnetic Resonance Imaging: Data Acquisition and Analysis Fall 2008 MIT OpenCourseWare http://ocw.mit.edu HST.583 Functional Magnetic Resonance Imaging: Data Acquisition and Analysis Fall 2008 For information about citing these materials or our Terms of Use, visit: http://ocw.mit.edu/terms.

More information

Tina Pavlin 12 March 2013

Tina Pavlin 12 March 2013 Table of Contents Chapter 1 General... 2 Spectrometer Reset... 2 Adjustment of DC- offset (Zipper Artifact)... 2 Removal of Zipper Artifact... 2 Prescription for Decreasing TE... 2 EPIs... 3 Chapter 2

More information

MRI image formation 8/3/2016. Disclosure. Outlines. Chen Lin, PhD DABR 3. Indiana University School of Medicine and Indiana University Health

MRI image formation 8/3/2016. Disclosure. Outlines. Chen Lin, PhD DABR 3. Indiana University School of Medicine and Indiana University Health MRI image formation Indiana University School of Medicine and Indiana University Health Disclosure No conflict of interest for this presentation 2 Outlines Data acquisition Spatial (Slice/Slab) selection

More information

TOPICS 2/5/2006 8:17 PM. 2D Acquisition 3D Acquisition

TOPICS 2/5/2006 8:17 PM. 2D Acquisition 3D Acquisition TOPICS 2/5/2006 8:17 PM 2D Acquisition 3D Acquisition 2D Acquisition Involves two main steps : Slice Selection Slice selection is accomplished by spatially saturating (single or multi slice imaging) or

More information

SIEMENS MAGNETOM Symphony syngo MR A30

SIEMENS MAGNETOM Symphony syngo MR A30 \\USER\ADNI STUDY\MAIN PROTOCOL\HUMAN PROTOCOL\localizer Scan Time: 9.2 [s] Voxel size: 2.2 1.1 10.0 [mm] Rel. SNR: 1.00 SIEMENS: gre Slice group 1 Slice group 2 Slice group 3 280 [mm] 10 [mm] 20 [ms]

More information

UNIVERSITY OF SOUTHAMPTON

UNIVERSITY OF SOUTHAMPTON UNIVERSITY OF SOUTHAMPTON PHYS2007W1 SEMESTER 2 EXAMINATION 2014-2015 MEDICAL PHYSICS Duration: 120 MINS (2 hours) This paper contains 10 questions. Answer all questions in Section A and only two questions

More information

Siemens AG, Healthcare Sector. syngo MR D13 0. Supplement - Parameters and image text 0.

Siemens AG, Healthcare Sector. syngo MR D13 0. Supplement - Parameters and image text 0. Siemens AG, Healthcare Sector 0 0 n.a. English Cs2 syngo Neuro Operator MR-05014 630 05/2010 01 02 Informatik, Manual D11 Cape syngo MR D13 0.0 Supplement - Parameters and image text 0. syngo MR D13 0.

More information

A Novel Iterative Thresholding Algorithm for Compressed Sensing Reconstruction of Quantitative MRI Parameters from Insufficient Data

A Novel Iterative Thresholding Algorithm for Compressed Sensing Reconstruction of Quantitative MRI Parameters from Insufficient Data A Novel Iterative Thresholding Algorithm for Compressed Sensing Reconstruction of Quantitative MRI Parameters from Insufficient Data Alexey Samsonov, Julia Velikina Departments of Radiology and Medical

More information

MB-EPI PCASL. Release Notes for Version February 2015

MB-EPI PCASL. Release Notes for Version February 2015 MB-EPI PCASL Release Notes for Version 1.0 20 February 2015 1 Background High-resolution arterial spin labeling (ASL) imaging is highly desirable in both neuroscience research and clinical applications

More information

SOP: Brain MRI Inital version Gorm Greisen. CONTENT 1.0 Timing of Brain MRI Informed consent...1

SOP: Brain MRI Inital version Gorm Greisen. CONTENT 1.0 Timing of Brain MRI Informed consent...1 SOP: Brain MRI Author(s) Date Changes Approved by Cornelia Hagmann Manon Benders Anne Mette Plomgaard 23.09.2012 1.0 Inital version Gorm Greisen CONTENT 1.0 Timing of Brain MRI...1 2.0 Informed consent...1

More information

QIBA Profile: Magnetic Resonance Elastography of the Liver

QIBA Profile: Magnetic Resonance Elastography of the Liver 5 QIBA Profile: Magnetic Resonance Elastography of the Liver Stage: A. Initial Draft July 28, 2017 10 15 20 25 30 35 40 Table of Contents Change Log:...3 Open Issues:...4 Closed Issues:...4 1. Executive

More information

45 µm polystyrene bead embedded in scattering tissue phantom. (a,b) raw images under oblique

45 µm polystyrene bead embedded in scattering tissue phantom. (a,b) raw images under oblique Phase gradient microscopy in thick tissue with oblique back-illumination Tim N Ford, Kengyeh K Chu & Jerome Mertz Supplementary Figure 1: Comparison of added versus subtracted raw OBM images 45 µm polystyrene

More information

Advanced MRI Techniques (and Applications)

Advanced MRI Techniques (and Applications) Advanced MRI Techniques (and Applications) Jeffry R. Alger, PhD Department of Neurology Ahmanson-Lovelace Brain Mapping Center Brain Research Institute Jonsson Comprehensive Cancer Center University of

More information

I.e. Sex differences in child appetitive traits and Eating in the Absence of Hunger:

I.e. Sex differences in child appetitive traits and Eating in the Absence of Hunger: Supplementary Materials I. Evidence of sex differences on eating behavior in children I.e. Sex differences in child appetitive traits and Eating in the Absence of Hunger: Table 2. Parent Report for Child

More information

E. Mark Haacke, PhD. The MRI Institute for Biomedical Research Detroit, Michigan Wayne State University Detroit, Michigan 48201

E. Mark Haacke, PhD. The MRI Institute for Biomedical Research Detroit, Michigan Wayne State University Detroit, Michigan 48201 E. Mark Haacke, PhD The MRI Institute for Biomedical Research Detroit, Michigan 48202 Wayne State University Detroit, Michigan 48201 Acknowledgements The testing and establishment of these protocols has

More information

Alzheimer s Disease Neuro Imaging III (ADNI3) MRI Analysis User Document

Alzheimer s Disease Neuro Imaging III (ADNI3) MRI Analysis User Document Alzheimer s Disease Neuro Imaging III (ADNI3) MRI Analysis User Document MRI Analysis Processing Pipeline Suggestions and Tips ADNI3 MRI Analysis Manual Page 1 of 11 Version Date: 28 June 2018 Contents

More information

Functional MRI. Jerry Allison, Ph. D. Medical College of Georgia

Functional MRI. Jerry Allison, Ph. D. Medical College of Georgia Functional MRI Jerry Allison, Ph. D. Medical College of Georgia BOLD Imaging Technique Blood Oxygen Level Dependent contrast can be used to map brain function Right Hand Motor Task Outline fmri BOLD Contrast

More information

TOF-MRA Using Multi-Oblique-Stack Acquisition (MOSA)

TOF-MRA Using Multi-Oblique-Stack Acquisition (MOSA) JOURNAL OF MAGNETIC RESONANCE IMAGING 26:432 436 (2007) Technical Note TOF-MRA Using Multi-Oblique-Stack Acquisition (MOSA) Ed X. Wu, PhD, 1,2 * Edward S. Hui, BEng, 1,2 and Jerry S. Cheung, BEng 1,2 Purpose:

More information

GE Healthcare. SIGNA Explorer Technical Data

GE Healthcare. SIGNA Explorer Technical Data GE Healthcare SIGNA Explorer Technical Data Contents Magnet... 3 Patient Table... 4 Gradient System... 5 Host computer and Recon engine... 6 RF Transmit and Receive... 7 RF Coils and arrays... 8 Imaging

More information

MRI Hot Topics Motion Correction for MR Imaging. medical

MRI Hot Topics Motion Correction for MR Imaging. medical MRI Hot Topics Motion Correction for MR Imaging s medical Motion Correction for MR Imaging Kyle A. Salem, PhD Motion Artifacts in a Clinical Setting Patient motion is probably the most common cause of

More information

MR Advance Techniques. Vascular Imaging. Class III

MR Advance Techniques. Vascular Imaging. Class III MR Advance Techniques Vascular Imaging Class III 1 Vascular Imaging There are several methods that can be used to evaluate the cardiovascular systems with the use of MRI. MRI will aloud to evaluate morphology

More information

T 1 MAPPING FOR DCE-MRI

T 1 MAPPING FOR DCE-MRI T 1 MAPPING FOR DCE-MRI A dissertation submitted to the Faculty of Medicine, University of Malaya in partial fulfillment of the requirements for the degree of Master of Medical Physics By NURUN NAJWA BINTI

More information

Measuring baseline whole-brain perfusion on GE 3.0T using arterial spin labeling (ASL) MRI

Measuring baseline whole-brain perfusion on GE 3.0T using arterial spin labeling (ASL) MRI Measuring baseline whole-brain perfusion on GE 3.0T using arterial spin labeling (ASL) MRI Revision date: 11/20/2006 Overview This document describes the procedure for measuring baseline whole-brain perfusion

More information

Role of Parallel Imaging in High Field Functional MRI

Role of Parallel Imaging in High Field Functional MRI Role of Parallel Imaging in High Field Functional MRI Douglas C. Noll & Bradley P. Sutton Department of Biomedical Engineering, University of Michigan Supported by NIH Grant DA15410 & The Whitaker Foundation

More information

XI Signal-to-Noise (SNR)

XI Signal-to-Noise (SNR) XI Signal-to-Noise (SNR) Lecture notes by Assaf Tal n(t) t. Noise. Characterizing Noise Noise is a random signal that gets added to all of our measurements. In D it looks like this: while in D

More information

CTA HEAD Perfusion AqONE without and with IV Contrast

CTA HEAD Perfusion AqONE without and with IV Contrast CTA HEAD Perfusion AqONE without and with IV Contrast Patient Position Adult Contrast Adult Injection Rate Supine IOML perpendicular to table top. IV: 100 ml with helical head CTA 50 ml without helical

More information

Imaging protocols for navigated procedures

Imaging protocols for navigated procedures 9732379 G02 Rev. 1 2015-11 Imaging protocols for navigated procedures How to use this document This document contains imaging protocols for navigated cranial, DBS and stereotactic, ENT, and spine procedures

More information

TARDIS Working Practice Document No: 035

TARDIS Working Practice Document No: 035 TARDIS Working Practice Document No: 035 Uploading CT or MR Images All stroke patients should have a baseline scan taken before randomisation. Any other CT scans or MRIs, taken up until completion of the

More information

Sampling, Ordering, Interleaving

Sampling, Ordering, Interleaving Sampling, Ordering, Interleaving Sampling patterns and PSFs View ordering Modulation due to transients Temporal modulations Slice interleaving Sequential, Odd/even, bit-reversed Arbitrary Other considerations:

More information

Gradient-Echo. Spin-Echo. Echo planar. Assessment of Regional Function Assessment of Global. Parallel Imaging. Function. Steady State Imaging

Gradient-Echo. Spin-Echo. Echo planar. Assessment of Regional Function Assessment of Global. Parallel Imaging. Function. Steady State Imaging Gradient-Echo Spin-Echo James W. Goldfarb Ph.D. Department of Research and Education St. Francis Hospital Program in Biomedical Engineering SUNY Stony Brook Echo planar Assessment of Regional Function

More information

Following on from the two previous chapters, which considered the model of the

Following on from the two previous chapters, which considered the model of the Chapter 5 Simulator validation Following on from the two previous chapters, which considered the model of the simulation process and how this model was implemented in software, this chapter is concerned

More information

Parallel Imaging. Marcin.

Parallel Imaging. Marcin. Parallel Imaging Marcin m.jankiewicz@gmail.com Parallel Imaging initial thoughts Over the last 15 years, great progress in the development of pmri methods has taken place, thereby producing a multitude

More information

fmri/dti analysis using Dynasuite

fmri/dti analysis using Dynasuite fmri/dti analysis using Dynasuite Contents 1 Logging in 2 Finding patient session 3 Viewing and adjusting images 4 Checking brain segmentation 5 Checking image registration 6 Seeing fmri results 7 Saving

More information

DICOM Correction Item

DICOM Correction Item DICOM Correction Item Correction Number CP-668 Log Summary: Type of Modification Addition Name of Standard PS 3.3, 3.17 2006 Rationale for Correction The term axial is common in practice, but is incorrectly

More information

Head motion in diffusion MRI

Head motion in diffusion MRI Head motion in diffusion MRI Anastasia Yendiki HMS/MGH/MIT Athinoula A. Martinos Center for Biomedical Imaging 11/06/13 Head motion in diffusion MRI 0/33 Diffusion contrast Basic principle of diffusion

More information

Release Notes. Multi-Band EPI C2P. Release HCP_v1 10 February 2014

Release Notes. Multi-Band EPI C2P. Release HCP_v1 10 February 2014 Release Notes Multi-Band EPI C2P Release HCP_v1 10 February 2014 Installation 1. Restart the system (reboot host and MRIR) 2. Extract the.zip file to a temporary directory 3. Run the installer.bat file

More information

Measuring baseline whole-brain perfusion on GE 3.0T using arterial spin labeling (ASL) MRI

Measuring baseline whole-brain perfusion on GE 3.0T using arterial spin labeling (ASL) MRI Measuring baseline whole-brain perfusion on GE 3.0T using arterial spin labeling (ASL) MRI Revision date: 09/15/2008 Overview This document describes the procedure for measuring baseline whole-brain perfusion

More information

SPECIFICATIONS FOR A NEW STATE OF ART 16 SLICE ALL PURPOSE C. T. SCANNER

SPECIFICATIONS FOR A NEW STATE OF ART 16 SLICE ALL PURPOSE C. T. SCANNER SPECIFICATIONS FOR A NEW STATE OF ART 16 SLICE ALL PURPOSE C. T. SCANNER A) Scanner Design X-Ray generator and tube: 1. Scanner: Whole body spiral CT scanner (16 slices) of latest technology. 2. X-Ray

More information

Super-resolution Reconstruction of Fetal Brain MRI

Super-resolution Reconstruction of Fetal Brain MRI Super-resolution Reconstruction of Fetal Brain MRI Ali Gholipour and Simon K. Warfield Computational Radiology Laboratory Children s Hospital Boston, Harvard Medical School Worshop on Image Analysis for

More information

NEURO M203 & BIOMED M263 WINTER 2014

NEURO M203 & BIOMED M263 WINTER 2014 NEURO M203 & BIOMED M263 WINTER 2014 MRI Lab 2: Neuroimaging Connectivity Lab In today s lab we will work with sample diffusion imaging data and the group averaged fmri data collected during your scanning

More information

HCP AutoAlign QA. Mary Susselman Michael Harms 05/14/18

HCP AutoAlign QA. Mary Susselman Michael Harms 05/14/18 HCP AutoAlign QA Mary Susselman Michael Harms 05/14/18 Table of Contents A. How to check AA parameters when reviewing the images for quality assurance fmri, dmri, SEFM T1/T2 Hi Res HP ASL Viewing tab orientation

More information

Compressed Sensing for Rapid MR Imaging

Compressed Sensing for Rapid MR Imaging Compressed Sensing for Rapid Imaging Michael Lustig1, Juan Santos1, David Donoho2 and John Pauly1 1 Electrical Engineering Department, Stanford University 2 Statistics Department, Stanford University rapid

More information

Saturn User Manual. Rubén Cárdenes. 29th January 2010 Image Processing Laboratory, University of Valladolid. Abstract

Saturn User Manual. Rubén Cárdenes. 29th January 2010 Image Processing Laboratory, University of Valladolid. Abstract Saturn User Manual Rubén Cárdenes 29th January 2010 Image Processing Laboratory, University of Valladolid Abstract Saturn is a software package for DTI processing and visualization, provided with a graphic

More information

Outline: Contrast-enhanced MRA

Outline: Contrast-enhanced MRA Outline: Contrast-enhanced MRA Background Technique Clinical Indications Future Directions Disclosures: GE Health Care: Research support Consultant: Bracco, Bayer The Basics During rapid IV infusion, Gadolinium

More information

Applications Guide for Interleaved

Applications Guide for Interleaved Applications Guide for Interleaved rephase/dephase MRAV Authors: Yongquan Ye, Ph.D. Dongmei Wu, MS. Tested MAGNETOM Systems : 7TZ, TRIO a Tim System, Verio MR B15A (N4_VB15A_LATEST_20070519) MR B17A (N4_VB17A_LATEST_20090307_P8)

More information

surface Image reconstruction: 2D Fourier Transform

surface Image reconstruction: 2D Fourier Transform 2/1/217 Chapter 2-3 K-space Intro to k-space sampling (chap 3) Frequenc encoding and Discrete sampling (chap 2) Point Spread Function K-space properties K-space sampling principles (chap 3) Basic Contrast

More information

Module 5: Dynamic Imaging and Phase Sharing. (true-fisp, TRICKS, CAPR, DISTAL, DISCO, HYPR) Review. Improving Temporal Resolution.

Module 5: Dynamic Imaging and Phase Sharing. (true-fisp, TRICKS, CAPR, DISTAL, DISCO, HYPR) Review. Improving Temporal Resolution. MRES 7005 - Fast Imaging Techniques Module 5: Dynamic Imaging and Phase Sharing (true-fisp, TRICKS, CAPR, DISTAL, DISCO, HYPR) Review Improving Temporal Resolution True-FISP (I) True-FISP (II) Keyhole

More information

Brain Images. Download the data. Comparing Images. 13 th February Version 1.4. For GIMIAS-1.4. Contact:

Brain Images. Download the data. Comparing Images. 13 th February Version 1.4. For GIMIAS-1.4. Contact: Brain Images Comparing Images 13 th February 2012 Version 1.4 For GIMIAS-1.4 Contact: cistib.developers@gmail.com The aim of this exercise is to show different visualization and fusion functionalities

More information

Functional analysis with DTI and diffusion-neurography of cranial nerves

Functional analysis with DTI and diffusion-neurography of cranial nerves Functional analysis with DTI and diffusion-neurography of cranial nerves Poster No.: C-1942 Congress: ECR 2013 Type: Educational Exhibit Authors: J. P. Martínez Barbero, T. Martín Noguerol, A. Luna Alcalá;

More information

Cocozza S., et al. : ALTERATIONS OF FUNCTIONAL CONNECTIVITY OF THE MOTOR CORTEX IN FABRY'S DISEASE: AN RS-FMRI STUDY

Cocozza S., et al. : ALTERATIONS OF FUNCTIONAL CONNECTIVITY OF THE MOTOR CORTEX IN FABRY'S DISEASE: AN RS-FMRI STUDY ALTERATIONS OF FUNCTIONAL CONNECTIVITY OF THE MOTOR CORTEX IN FABRY'S DISEASE: AN RS-FMRI STUDY SUPPLEMENTARY MATERIALS Sirio Cocozza, MD 1*, Antonio Pisani, MD, PhD 2, Gaia Olivo, MD 1, Francesco Saccà,

More information

What is pmri? Overview. The Need for Speed: A Technical and Clinical Primer for Parallel MR Imaging 8/1/2011

What is pmri? Overview. The Need for Speed: A Technical and Clinical Primer for Parallel MR Imaging 8/1/2011 The Need for Speed: A Technical and Clinical Primer for Parallel MR Imaging Nathan Yanasak, Ph.D. Chair, AAPM TG118 Assistant Professor Department of Radiology Director, Core Imaging Facility for Small

More information

Optimizing MR Scan Design for Parameter Estimation (with Application to T 1, T 2 Relaxometry)

Optimizing MR Scan Design for Parameter Estimation (with Application to T 1, T 2 Relaxometry) Optimizing MR Scan Design for Parameter Estimation (with Application to T 1, T 2 Relaxometry) Gopal Nataraj *, Jon-Fredrik Nielsen, and Jeffrey A. Fessler * Depts. of * EECS and Biomedical Engineering

More information

Blipped-Controlled Aliasing in Parallel Imaging for Simultaneous Multislice Echo Planar Imaging With Reduced g-factor Penalty

Blipped-Controlled Aliasing in Parallel Imaging for Simultaneous Multislice Echo Planar Imaging With Reduced g-factor Penalty IMAGING METHODOLOGY - Full Papers Magnetic Resonance in Medicine 67:1210 1224 (2012) Blipped-Controlled Aliasing in Parallel Imaging for Simultaneous Multislice Echo Planar Imaging With Reduced g-factor

More information

Parallel Magnetic Resonance Imaging (pmri): How Does it Work, and What is it Good For?

Parallel Magnetic Resonance Imaging (pmri): How Does it Work, and What is it Good For? Parallel Magnetic Resonance Imaging (pmri): How Does it Work, and What is it Good For? Nathan Yanasak, Ph.D. Chair, AAPM TG118 Department of Radiology Georgia Regents University Overview Phased-array coils

More information

Module 4. K-Space Symmetry. Review. K-Space Review. K-Space Symmetry. Partial or Fractional Echo. Half or Partial Fourier HASTE

Module 4. K-Space Symmetry. Review. K-Space Review. K-Space Symmetry. Partial or Fractional Echo. Half or Partial Fourier HASTE MRES 7005 - Fast Imaging Techniques Module 4 K-Space Symmetry Review K-Space Review K-Space Symmetry Partial or Fractional Echo Half or Partial Fourier HASTE Conditions for successful reconstruction Interpolation

More information

Supplementary Information

Supplementary Information Supplementary Information Magnetic resonance imaging reveals functional anatomy and biomechanics of a living dragon tree Linnea Hesse 1,2,*, Tom Masselter 1,2,3, Jochen Leupold 4, Nils Spengler 5, Thomas

More information

Dynamic Contrast enhanced MRA

Dynamic Contrast enhanced MRA Dynamic Contrast enhanced MRA Speaker: Yung-Chieh Chang Date : 106.07.22 Department of Radiology, Taichung Veterans General Hospital, Taichung, Taiwan 1 Outline Basic and advanced principles of Diffusion

More information

Integrating spatially resolved 3D MALDI imaging mass spectrometry with in vivo MRI

Integrating spatially resolved 3D MALDI imaging mass spectrometry with in vivo MRI Integrating spatially resolved 3D MALDI imaging mass spectrometry with in vivo MRI Tuhin K Sinha, Sheerin Khatib-Shahidi, Thomas E Yankeelov, Khubaib Mapara, Moneeb Ehtesham, D Shannon Cornett, Benoit

More information

Short Tutorial for ODIN, the Object-oriented Development Interface for NMR

Short Tutorial for ODIN, the Object-oriented Development Interface for NMR Short Tutorial for ODIN, the Object-oriented Development Interface for NMR Thies H. Jochimsen November 8, 2016 Contents 1 Sequence Programming 2 1.1 Introduction..................................... 2

More information

High Fidelity Brain Connectivity Imaging

High Fidelity Brain Connectivity Imaging CNI Inauguration Workshop Stanford, March 22 nd, 2012 High Fidelity Brain Connectivity Imaging -Recent Progress on Diffusion Weighted MRI for High Resolution and Low Distortion Allen W. Song, PhD Brain

More information

8/11/2009. Common Areas of Motion Problem. Motion Compensation Techniques and Applications. Type of Motion. What s your problem

8/11/2009. Common Areas of Motion Problem. Motion Compensation Techniques and Applications. Type of Motion. What s your problem Common Areas of Motion Problem Motion Compensation Techniques and Applications Abdominal and cardiac imaging. Uncooperative patient, such as pediatric. Dynamic imaging and time series. Chen Lin, PhD Indiana

More information

MriCloud DTI Processing Pipeline. DTI processing can be initiated by choosing DTI Processing in the top menu bar.

MriCloud DTI Processing Pipeline. DTI processing can be initiated by choosing DTI Processing in the top menu bar. MriCloud DTI Processing Pipeline 1: Data Upload 1-1: Web interface DTI processing can be initiated by choosing DTI Processing in the top menu bar. To avoid any HIPPA issues, data need to be first converted

More information

The alignment process uses two alignment methods: (1) the mrvista function, rxalign, for a rough alignment, and then (2) KNK's alignment for

The alignment process uses two alignment methods: (1) the mrvista function, rxalign, for a rough alignment, and then (2) KNK's alignment for Alignment (Allegra) Download example alignment script here. Anatomical images are collected at much higher resolution (isotropic 1 mm voxels) than functional images (isotropic 2 mm voxels; sometimes 2.5).

More information

Super-Resolution Reconstruction of Diffusion-Weighted Images from Distortion Compensated Orthogonal Anisotropic Acquisitions.

Super-Resolution Reconstruction of Diffusion-Weighted Images from Distortion Compensated Orthogonal Anisotropic Acquisitions. Super-Resolution Reconstruction of Diffusion-Weighted Images from Distortion Compensated Orthogonal Anisotropic Acquisitions. Benoit Scherrer Ali Gholipour Simon K. Warfield Children s Hospital Boston,

More information